| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312336
Identifier: 158312336
GI number: 158312336
Start: 562637
End: 563221
Strand: Direct
Name: 158312336
Synonym: Franean1_0476
Alternate gene names: NA
Gene position: 562637-563221 (Clockwise)
Preceding gene: 158312333
Following gene: 158312340
Centisome position: 6.26
GC content: 64.62
Gene sequence:
>585_bases ATGCCGGCAGAAGAATCCGCGACCGGGATGCCACGGCGGGCCTTCCTGGCCGCGGGTCTGGGCATAGCGACGGTCGGCGC GACGGTGGCACTGGCGAAACCGGCCGCCGCGGCTGGGGACGGGATCCACTACTGGCGCTTCTGTAACAAATGCTTCGGGC TGCTCCGAGAGCTCCGGGCGGACAACAATCATTGCCCGCAGGGTGGTTCTCATGTTATCCAGGGCTGGACGTTCGCTGTG GCGTATTCGAACGGAAACTTTCTCCACGCCGGCGAGACGCCGTCCCTACAAAGCGCCTGGATGGAGTGCTACTACTGTGC GCTCATCTACTACGGCGACGCCAACGGAGTATGCGTCGCCCGAGGCGGGGCGGGTCATTTCGGAACATCCCAGCAGAATC TCCTCCCCCACGACCTGAATCCGATACCGGGCGGCTACCAGTCCGAGTGGCGGTTCTGTTTCAAGTGCGGCACGCTGTAC TTCGACGGTTACCGGCCGAACCGCGGTGCCTGCCCGGGGAACCCGGGCTGGGGACACGCCGCAGCCGGTTACATGTTCCA GCTCCAGGTGGCTGCGTACACCTGA
Upstream 100 bases:
>100_bases GAGGGCGCGGACGCCGTATTCCCCCGGACCGCGTCGAAGGACGTCGCCTGGAATGCGTCGTGGATCGAGATTTTCGACTA GAAACGGGGGGCGGGGTTCG
Downstream 100 bases:
>100_bases CCACGTCGAGCGTGCGCCGACGGGCCGGTCCTCGCCGTCGACCCGTCGGCCCGCCAGCTCGCGGCGAGGCCGCTGTCCAC AGTGTGGGTGGAGCCGGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPAEESATGMPRRAFLAAGLGIATVGATVALAKPAAAAGDGIHYWRFCNKCFGLLRELRADNNHCPQGGSHVIQGWTFAV AYSNGNFLHAGETPSLQSAWMECYYCALIYYGDANGVCVARGGAGHFGTSQQNLLPHDLNPIPGGYQSEWRFCFKCGTLY FDGYRPNRGACPGNPGWGHAAAGYMFQLQVAAYT
Sequences:
>Translated_194_residues MPAEESATGMPRRAFLAAGLGIATVGATVALAKPAAAAGDGIHYWRFCNKCFGLLRELRADNNHCPQGGSHVIQGWTFAV AYSNGNFLHAGETPSLQSAWMECYYCALIYYGDANGVCVARGGAGHFGTSQQNLLPHDLNPIPGGYQSEWRFCFKCGTLY FDGYRPNRGACPGNPGWGHAAAGYMFQLQVAAYT >Mature_193_residues PAEESATGMPRRAFLAAGLGIATVGATVALAKPAAAAGDGIHYWRFCNKCFGLLRELRADNNHCPQGGSHVIQGWTFAVA YSNGNFLHAGETPSLQSAWMECYYCALIYYGDANGVCVARGGAGHFGTSQQNLLPHDLNPIPGGYQSEWRFCFKCGTLYF DGYRPNRGACPGNPGWGHAAAGYMFQLQVAAYT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20797; Mature: 20665
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAEESATGMPRRAFLAAGLGIATVGATVALAKPAAAAGDGIHYWRFCNKCFGLLRELRA CCCCCCCCCCCHHHHHHHCCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC DNNHCPQGGSHVIQGWTFAVAYSNGNFLHAGETPSLQSAWMECYYCALIYYGDANGVCVA CCCCCCCCCCEEECCEEEEEEECCCCEEECCCCCCHHHHHHHHEEEEEEEEECCCCEEEE RGGAGHFGTSQQNLLPHDLNPIPGGYQSEWRFCFKCGTLYFDGYRPNRGACPGNPGWGHA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCEEECCCCCCCCCCCCCCCCCCC AAGYMFQLQVAAYT CCCEEEEEEEEEEC >Mature Secondary Structure PAEESATGMPRRAFLAAGLGIATVGATVALAKPAAAAGDGIHYWRFCNKCFGLLRELRA CCCCCCCCCCHHHHHHHCCCHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC DNNHCPQGGSHVIQGWTFAVAYSNGNFLHAGETPSLQSAWMECYYCALIYYGDANGVCVA CCCCCCCCCCEEECCEEEEEEECCCCEEECCCCCCHHHHHHHHEEEEEEEEECCCCEEEE RGGAGHFGTSQQNLLPHDLNPIPGGYQSEWRFCFKCGTLYFDGYRPNRGACPGNPGWGHA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCEEECCCCCCCCCCCCCCCCCCC AAGYMFQLQVAAYT CCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA