Click here to switch to the map view.

The map label for this gene is 158312333

Identifier: 158312333

GI number: 158312333

Start: 557745

End: 558773

Strand: Direct

Name: 158312333

Synonym: Franean1_0473

Alternate gene names: NA

Gene position: 557745-558773 (Clockwise)

Preceding gene: 158312332

Following gene: 158312336

Centisome position: 6.21

GC content: 69.68

Gene sequence:

>1029_bases
GTGAGTCCATCGTATGAGGGTCGCCAGATTGTGGGAATCGATCTCCATCGGCGGCGGTCGGTGATCGTGCGGATGACCCC
GGACGGGTATCCGCTGGGAACGGTTCGGATCAGCAACGATGCTGCCACCCTCGCTGCTGAGATCAGCCGTGCCGGTGAGC
ACCCCGACGTGGTGTTGGAGGCGACGTACGGCTGGTACTGGGCGGCGGATGTGCTGGCCGCCGCTGGCGCGCAGGTTCAT
CTCGCGCACCCGCTGGGCGTGAAGGGTTTCGCCTACCGGCGGGTGAAGAACGACGTCCGTGACGCCGCGGATCTCGCGGA
CCTGCTGCGGATGGGACGTCTGCCCGAGGCGTGGGTCGCTCCACCGCCGGTGCGGGAACTGCGGGAGACCGTCCGTCACC
GTGCGGCGCTCGTCGCGATCCGTTCGGCGTGCAAGGCCCAGATCCACGCGGTCCTCGCGAAGAACGGTGTCGCGGTGCCC
ATGACCGACCTGTTCGGCCAGGCCGGAACCGACCTCCTCGGCCAGGTCGAGCTCCCGAGCCCGTTCCACGCCCGCGTCAC
GAGTCTGCGCCGCCTCATCGACCTGCTCGACTTCGAAATCGACGCGGCCGCCTGTCAGCTCGCCGGCCGGCTCGCGCGGG
ATCCGGGCTATCAGGCGCTGCTGGTCCTGCCCGGGGTCGGGAAGACCTTGGCCGCGGTGTTCCTCGCCGAGATCGGGGAC
ATCACCCGCTTCCCCACGCCCGGTCACCTTGCCAGTTGGGCTGGTCTCACTCCCCGGCACCGTGAGTCCGACACCACCGT
GCACCGCGGCCACATCACCAAACAGGGCTCCTCCCTGATTCGCTGGGCCGCGATCGAAGCCGTGTCGATCCTGCCTCCGA
CGACCCCGGTCCTGGGCCCGACCAAGACCCGGGTCGCTGCCCGCCGCGGCACCAACATCGGCAAGGTCGCCGCGGCCCGC
AAGCTGCTCACGTTCGTCTTCTACGCGCTGCGCGACGGTGAGGTCCGCGCGCTGCACACGGCGGCGTGA

Upstream 100 bases:

>100_bases
ATGATGCGATGAAGGGGCGGGGCCTCCGCTCCTGGTGACTCCCCGGGGTCGGGGGTAGGTCCCTCGGGGTTGCTCACGTC
TACCGACGAAGGAGGCCCCT

Downstream 100 bases:

>100_bases
GCAGGTGTTCACACGATCAGACGCGTGGCCGCCCAGGTCATGACCCCCACCACTCCGGTGGCGCGGTCGACGTGTTGATT
GACCCCGTCTGATCGTGGCC

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSPSYEGRQIVGIDLHRRRSVIVRMTPDGYPLGTVRISNDAATLAAEISRAGEHPDVVLEATYGWYWAADVLAAAGAQVH
LAHPLGVKGFAYRRVKNDVRDAADLADLLRMGRLPEAWVAPPPVRELRETVRHRAALVAIRSACKAQIHAVLAKNGVAVP
MTDLFGQAGTDLLGQVELPSPFHARVTSLRRLIDLLDFEIDAAACQLAGRLARDPGYQALLVLPGVGKTLAAVFLAEIGD
ITRFPTPGHLASWAGLTPRHRESDTTVHRGHITKQGSSLIRWAAIEAVSILPPTTPVLGPTKTRVAARRGTNIGKVAAAR
KLLTFVFYALRDGEVRALHTAA

Sequences:

>Translated_342_residues
MSPSYEGRQIVGIDLHRRRSVIVRMTPDGYPLGTVRISNDAATLAAEISRAGEHPDVVLEATYGWYWAADVLAAAGAQVH
LAHPLGVKGFAYRRVKNDVRDAADLADLLRMGRLPEAWVAPPPVRELRETVRHRAALVAIRSACKAQIHAVLAKNGVAVP
MTDLFGQAGTDLLGQVELPSPFHARVTSLRRLIDLLDFEIDAAACQLAGRLARDPGYQALLVLPGVGKTLAAVFLAEIGD
ITRFPTPGHLASWAGLTPRHRESDTTVHRGHITKQGSSLIRWAAIEAVSILPPTTPVLGPTKTRVAARRGTNIGKVAAAR
KLLTFVFYALRDGEVRALHTAA
>Mature_341_residues
SPSYEGRQIVGIDLHRRRSVIVRMTPDGYPLGTVRISNDAATLAAEISRAGEHPDVVLEATYGWYWAADVLAAAGAQVHL
AHPLGVKGFAYRRVKNDVRDAADLADLLRMGRLPEAWVAPPPVRELRETVRHRAALVAIRSACKAQIHAVLAKNGVAVPM
TDLFGQAGTDLLGQVELPSPFHARVTSLRRLIDLLDFEIDAAACQLAGRLARDPGYQALLVLPGVGKTLAAVFLAEIGDI
TRFPTPGHLASWAGLTPRHRESDTTVHRGHITKQGSSLIRWAAIEAVSILPPTTPVLGPTKTRVAARRGTNIGKVAAARK
LLTFVFYALRDGEVRALHTAA

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 36902; Mature: 36771

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSYEGRQIVGIDLHRRRSVIVRMTPDGYPLGTVRISNDAATLAAEISRAGEHPDVVLE
CCCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEE
ATYGWYWAADVLAAAGAQVHLAHPLGVKGFAYRRVKNDVRDAADLADLLRMGRLPEAWVA
ECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PPPVRELRETVRHRAALVAIRSACKAQIHAVLAKNGVAVPMTDLFGQAGTDLLGQVELPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHCCCCCCCEEEECCCC
PFHARVTSLRRLIDLLDFEIDAAACQLAGRLARDPGYQALLVLPGVGKTLAAVFLAEIGD
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH
ITRFPTPGHLASWAGLTPRHRESDTTVHRGHITKQGSSLIRWAAIEAVSILPPTTPVLGP
HCCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHEECCCCCCCCCC
TKTRVAARRGTNIGKVAAARKLLTFVFYALRDGEVRALHTAA
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure 
SPSYEGRQIVGIDLHRRRSVIVRMTPDGYPLGTVRISNDAATLAAEISRAGEHPDVVLE
CCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEE
ATYGWYWAADVLAAAGAQVHLAHPLGVKGFAYRRVKNDVRDAADLADLLRMGRLPEAWVA
ECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PPPVRELRETVRHRAALVAIRSACKAQIHAVLAKNGVAVPMTDLFGQAGTDLLGQVELPS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHCCCCCCCEEEECCCC
PFHARVTSLRRLIDLLDFEIDAAACQLAGRLARDPGYQALLVLPGVGKTLAAVFLAEIGD
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH
ITRFPTPGHLASWAGLTPRHRESDTTVHRGHITKQGSSLIRWAAIEAVSILPPTTPVLGP
HCCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHEECCCCCCCCCC
TKTRVAARRGTNIGKVAAARKLLTFVFYALRDGEVRALHTAA
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]