| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312332
Identifier: 158312332
GI number: 158312332
Start: 557021
End: 557503
Strand: Direct
Name: 158312332
Synonym: Franean1_0472
Alternate gene names: NA
Gene position: 557021-557503 (Clockwise)
Preceding gene: 158312327
Following gene: 158312333
Centisome position: 6.2
GC content: 58.8
Gene sequence:
>483_bases GTGCCAAATCGGGCCACCGATGATCCCGTAGACCCTGAACTCGTCGTCATCCTCAATCCATCGGTAGACGCCGGAACCGC TGTCCCCTCCTTGTGCCCACCACTTCGTGGCTACGTCGGACTGGAACGCGGCGGCGACGTGATAGGTGACATGATCATCA AAGATCTCGTCGCCCATCGCATCATTGCGCGCACACCGTTCCTCGTCCGAGGTTTTCCCATTGAAGCATACGCTGGTATT GGCAACGAAATCGTCGGCGTCGTCCGTGACGTTGCGCAGGAGGCCATCGGCGGCGATGATCTGATTGGTGGCGAGACCGG GGGAAGTTATCCGGATCGACTCGTAGTCGCCGTAGGTGTTGAAGCCCGAACGTCGGTCCACCACGATGCCGATGATCGTG TTCGAAGGATTACCAGTGAGAATGTTCGCATTGGGCACCGAGACAAAGGCTCCCTCGGGGAAGCAGTGTCCGGCGGTCAA TAG
Upstream 100 bases:
>100_bases CAGTCAGGACGGAGGTGCCAATGGCACCCTGGATGTCCTGGTCGAAAGAATACCAGAATCCACCATCGGTCGGGTTCTCA AGGATGTCGTCGTCGTCGAA
Downstream 100 bases:
>100_bases GTAGGTTTCTCCGTCGGACTTCGTCGTGAGGTAGCCGGCCGTGCATTCACCGTCGAGCAGATCCTCGTCCTGGATCCTCA TCCCGCCGTAGATCGCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MPNRATDDPVDPELVVILNPSVDAGTAVPSLCPPLRGYVGLERGGDVIGDMIIKDLVAHRIIARTPFLVRGFPIEAYAGI GNEIVGVVRDVAQEAIGGDDLIGGETGGSYPDRLVVAVGVEARTSVHHDADDRVRRITSENVRIGHRDKGSLGEAVSGGQ
Sequences:
>Translated_160_residues MPNRATDDPVDPELVVILNPSVDAGTAVPSLCPPLRGYVGLERGGDVIGDMIIKDLVAHRIIARTPFLVRGFPIEAYAGI GNEIVGVVRDVAQEAIGGDDLIGGETGGSYPDRLVVAVGVEARTSVHHDADDRVRRITSENVRIGHRDKGSLGEAVSGGQ >Mature_159_residues PNRATDDPVDPELVVILNPSVDAGTAVPSLCPPLRGYVGLERGGDVIGDMIIKDLVAHRIIARTPFLVRGFPIEAYAGIG NEIVGVVRDVAQEAIGGDDLIGGETGGSYPDRLVVAVGVEARTSVHHDADDRVRRITSENVRIGHRDKGSLGEAVSGGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16811; Mature: 16680
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNRATDDPVDPELVVILNPSVDAGTAVPSLCPPLRGYVGLERGGDVIGDMIIKDLVAHR CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHH IIARTPFLVRGFPIEAYAGIGNEIVGVVRDVAQEAIGGDDLIGGETGGSYPDRLVVAVGV HHHCCCCEEECCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC EARTSVHHDADDRVRRITSENVRIGHRDKGSLGEAVSGGQ CHHCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure PNRATDDPVDPELVVILNPSVDAGTAVPSLCPPLRGYVGLERGGDVIGDMIIKDLVAHR CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHH IIARTPFLVRGFPIEAYAGIGNEIVGVVRDVAQEAIGGDDLIGGETGGSYPDRLVVAVGV HHHCCCCEEECCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC EARTSVHHDADDRVRRITSENVRIGHRDKGSLGEAVSGGQ CHHCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA