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The map label for this gene is 158312308

Identifier: 158312308

GI number: 158312308

Start: 525541

End: 526257

Strand: Direct

Name: 158312308

Synonym: Franean1_0446

Alternate gene names: NA

Gene position: 525541-526257 (Clockwise)

Preceding gene: 158312307

Following gene: 158312309

Centisome position: 5.85

GC content: 69.6

Gene sequence:

>717_bases
ATGGGAGCGGACAAGTTCTGGGCCGGCGTCAGAGCCTCCCTCGCCGGGGTGAAACCACCCGCCCCGGCACGCGGCTACAC
TTTCGATCCCTCCCGCGCCTCGCAGGACGACCTGAACCGCACCCTGGCGCGCGGGAGCGCAGCAAACCCCACAGTGTGCA
GCGCTCAGTGCCCAGGCAGCACCGTCAGCGGCGGCCTTTCTCGCGATCGTTGCGGCGACGCTTGCATGTACATAGGCGTC
GGTGCCGGCATCGCCGCCATAGCCGGCGTCACCGTGCTGACCGATGGTCTCATCGCGGCACCGGAAGGCGCTGCCGCCGG
TGGTCTCGGCCGCGCCGTCCGCGGCTGCACCGGCCGCAACAGTTTCGACGGCGCCACCGGCGTCCTCATGGCCGACGGAA
CCCACAAACCCATCCGCGACGTCCATGTCGGTGACCAGGTCCTCGCCACCGACCCCACCACCGGCCGCACCGAACCCCAC
ACCGTCACCAACCTGATCATCGGCACCGGCGACAAACACCTCGTCGACATCACCCTCGACACCCCCGGCCCCGATGCCAC
CCTCACCGCCACCGACCACCACCCCTTCTGGGACGAAACCGACCACACCTGGGTCGACGCCGACGACCTCACCACCACCA
ACCGCCTCCGCACCCCCACCGGTACCCTCCTCGCGGTAGTCGCCTGTGGGGTGCCAGAAGTCGGCCTGAGCCTGTGA

Upstream 100 bases:

>100_bases
GGCGTCAACGCCGCCCTCGCCCCATGCAGAGGGCTCGGATCAAACCGGCCCCCCGCGTCCCCCGGCCCTGAGCGCGGAGG
CGCAGCGCCAGATCGCCCGG

Downstream 100 bases:

>100_bases
CCTGGGGCGATGCGCCGGCGCGGGGTCGGCCGCATGATGGTCAACTATGTCCGTGCGCCTGCTGTACCTGATCTTCGTTC
GGGTCTGTGGCTGGCTGGTT

Product: hedgehog/intein hint domain-containing protein

Products: NA

Alternate protein names: YD Repeat-Containing Protein; Large Secreted Protein; LOW QUALITY PROTEIN YD Repeat-Containing Protein; RHS Repeat-Containing Protein; Extracellular RHS Repeat Protein; Laminin G Domain-Containing Protein; Hedgehog/Intein Hint Domain-Containing Protein; Yd Repeat-Containing Protein; Rhs Family Protein; Methyl-Accepting Chemotaxis Sensory Transducer

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MGADKFWAGVRASLAGVKPPAPARGYTFDPSRASQDDLNRTLARGSAANPTVCSAQCPGSTVSGGLSRDRCGDACMYIGV
GAGIAAIAGVTVLTDGLIAAPEGAAAGGLGRAVRGCTGRNSFDGATGVLMADGTHKPIRDVHVGDQVLATDPTTGRTEPH
TVTNLIIGTGDKHLVDITLDTPGPDATLTATDHHPFWDETDHTWVDADDLTTTNRLRTPTGTLLAVVACGVPEVGLSL

Sequences:

>Translated_238_residues
MGADKFWAGVRASLAGVKPPAPARGYTFDPSRASQDDLNRTLARGSAANPTVCSAQCPGSTVSGGLSRDRCGDACMYIGV
GAGIAAIAGVTVLTDGLIAAPEGAAAGGLGRAVRGCTGRNSFDGATGVLMADGTHKPIRDVHVGDQVLATDPTTGRTEPH
TVTNLIIGTGDKHLVDITLDTPGPDATLTATDHHPFWDETDHTWVDADDLTTTNRLRTPTGTLLAVVACGVPEVGLSL
>Mature_237_residues
GADKFWAGVRASLAGVKPPAPARGYTFDPSRASQDDLNRTLARGSAANPTVCSAQCPGSTVSGGLSRDRCGDACMYIGVG
AGIAAIAGVTVLTDGLIAAPEGAAAGGLGRAVRGCTGRNSFDGATGVLMADGTHKPIRDVHVGDQVLATDPTTGRTEPHT
VTNLIIGTGDKHLVDITLDTPGPDATLTATDHHPFWDETDHTWVDADDLTTTNRLRTPTGTLLAVVACGVPEVGLSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24266; Mature: 24135

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGADKFWAGVRASLAGVKPPAPARGYTFDPSRASQDDLNRTLARGSAANPTVCSAQCPGS
CCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCEEECCCCCC
TVSGGLSRDRCGDACMYIGVGAGIAAIAGVTVLTDGLIAAPEGAAAGGLGRAVRGCTGRN
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHCCCCCC
SFDGATGVLMADGTHKPIRDVHVGDQVLATDPTTGRTEPHTVTNLIIGTGDKHLVDITLD
CCCCCCEEEEECCCCCCCCEECCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEC
TPGPDATLTATDHHPFWDETDHTWVDADDLTTTNRLRTPTGTLLAVVACGVPEVGLSL
CCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GADKFWAGVRASLAGVKPPAPARGYTFDPSRASQDDLNRTLARGSAANPTVCSAQCPGS
CCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCEEECCCCCC
TVSGGLSRDRCGDACMYIGVGAGIAAIAGVTVLTDGLIAAPEGAAAGGLGRAVRGCTGRN
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHCCCCCC
SFDGATGVLMADGTHKPIRDVHVGDQVLATDPTTGRTEPHTVTNLIIGTGDKHLVDITLD
CCCCCCEEEEECCCCCCCCEECCCCEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEC
TPGPDATLTATDHHPFWDETDHTWVDADDLTTTNRLRTPTGTLLAVVACGVPEVGLSL
CCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA