Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is pld1 [H]

Identifier: 158312309

GI number: 158312309

Start: 526304

End: 527542

Strand: Direct

Name: pld1 [H]

Synonym: Franean1_0447

Alternate gene names: 158312309

Gene position: 526304-527542 (Clockwise)

Preceding gene: 158312308

Following gene: 158312311

Centisome position: 5.86

GC content: 65.46

Gene sequence:

>1239_bases
ATGTCCGTGCGCCTGCTGTACCTGATCTTCGTTCGGGTCTGTGGCTGGCTGGTTCTACTCGGTCGCTCGTCGGCCGCCAA
GGACTTGGAATTGCTGGTGCTACGGCATGAGGTCACGGTGCTGCGCCGTACCCAGCCCAGGCCCCGGTGGGACTGGGCGG
ACCGGGCGGTCCTCAATCAAACAAGATCAAGGAATGGCGGGGTCTGGCCACCCGCTACGACAAGACACCCGAAAGCTACG
CCGCAGGACTCCACCTGCGCGGATCCATCCTCTGGCTACGCAGCCTGCCAACCCCATGATCCGAACTTGGAACAGACCCT
AGGTACCGACGGACCCGAGGTTCCCGTGGTCTGCGTCGGAACGAGCCCGCTGGGCGGGCTCCCGACAATCTACGGCTATG
ACGTCGAGGCGGGGCAGGCGGTGGCGACGATTCGCCGCGTGTTGGAGTCACCGATCGACTTCATCGACACCTCGAACGAG
TACGCGAACGGCGAAAGCGAGCGGCGCATCGGCGAGGCGTTGCGCAGCGCGGCAGGGGGTCCCGGCAATGTCGTGCTCGC
GACCAAGGCAGATCCCGCGCTGTGGGCCACGGAGTTCCCCGGCAGCCGAGTGCGGGAATCGTTCCGGGAGAGCACCGAGC
GGCTCGGGGTTGATCGGTTCGAGGTGTTCTACCTGCACGACCCGGAGCGCTTCGATTTCGGGTACATGACGGCCCCCGGA
GGTGCGGTCGAGGCGATGGTGCAGCTGCGTACCGACGGCCTGGCCACGGCAATCGGCGTGGCCGGCAGTGACATCAGCGA
GATGCGCCGCTACGTCGACCTCGGCGTCTTCGACGTCATCCTGAACCACAACCGGTATACACTTCTTGATCGTTCTGCGG
ACGCCCTCATCGACCACGCGGTCAACGCCGGCCTGTCCTTCATTAATGCCGCACCGTATGCCAGCGGCATGCTCGCGAAG
CAGGTCTCGGCCCGTCCGAGGTATCAATATCGCGCGCCATCGCCCGAGATCGTCCGCACCACCGCGTGGTTGCACCAGGA
GTGCGCCCGGTTCCACGTGCCGCTCGCGGCACTCGCCCTCCAGTTCTCGACACGCGATCCTCGGATCAGCTCGACGGTCG
TCGGCGTATCAGCTCCGGAGCGTGTGGATGAACTCGTGGAGAACGAGCAGCGTGAGATCCCGTCGGAGCTGTGGGACTCC
GTGCGCGAGCGGCTGGTGTTGCCGCCCACAGTGACGTAA

Upstream 100 bases:

>100_bases
ACCCTCCTCGCGGTAGTCGCCTGTGGGGTGCCAGAAGTCGGCCTGAGCCTGTGACCTGGGGCGATGCGCCGGCGCGGGGT
CGGCCGCATGATGGTCAACT

Downstream 100 bases:

>100_bases
CGGTATGGCGGTGCTATGCGGGACGTCCGGCGGCGTGACCACCCGCATGCGATGAGGCCCATCGGACCTCTACGTGCCCC
GGCCCCAGTTCGCAACAGCC

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MSVRLLYLIFVRVCGWLVLLGRSSAAKDLELLVLRHEVTVLRRTQPRPRWDWADRAVLNQTRSRNGGVWPPATTRHPKAT
PQDSTCADPSSGYAACQPHDPNLEQTLGTDGPEVPVVCVGTSPLGGLPTIYGYDVEAGQAVATIRRVLESPIDFIDTSNE
YANGESERRIGEALRSAAGGPGNVVLATKADPALWATEFPGSRVRESFRESTERLGVDRFEVFYLHDPERFDFGYMTAPG
GAVEAMVQLRTDGLATAIGVAGSDISEMRRYVDLGVFDVILNHNRYTLLDRSADALIDHAVNAGLSFINAAPYASGMLAK
QVSARPRYQYRAPSPEIVRTTAWLHQECARFHVPLAALALQFSTRDPRISSTVVGVSAPERVDELVENEQREIPSELWDS
VRERLVLPPTVT

Sequences:

>Translated_412_residues
MSVRLLYLIFVRVCGWLVLLGRSSAAKDLELLVLRHEVTVLRRTQPRPRWDWADRAVLNQTRSRNGGVWPPATTRHPKAT
PQDSTCADPSSGYAACQPHDPNLEQTLGTDGPEVPVVCVGTSPLGGLPTIYGYDVEAGQAVATIRRVLESPIDFIDTSNE
YANGESERRIGEALRSAAGGPGNVVLATKADPALWATEFPGSRVRESFRESTERLGVDRFEVFYLHDPERFDFGYMTAPG
GAVEAMVQLRTDGLATAIGVAGSDISEMRRYVDLGVFDVILNHNRYTLLDRSADALIDHAVNAGLSFINAAPYASGMLAK
QVSARPRYQYRAPSPEIVRTTAWLHQECARFHVPLAALALQFSTRDPRISSTVVGVSAPERVDELVENEQREIPSELWDS
VRERLVLPPTVT
>Mature_411_residues
SVRLLYLIFVRVCGWLVLLGRSSAAKDLELLVLRHEVTVLRRTQPRPRWDWADRAVLNQTRSRNGGVWPPATTRHPKATP
QDSTCADPSSGYAACQPHDPNLEQTLGTDGPEVPVVCVGTSPLGGLPTIYGYDVEAGQAVATIRRVLESPIDFIDTSNEY
ANGESERRIGEALRSAAGGPGNVVLATKADPALWATEFPGSRVRESFRESTERLGVDRFEVFYLHDPERFDFGYMTAPGG
AVEAMVQLRTDGLATAIGVAGSDISEMRRYVDLGVFDVILNHNRYTLLDRSADALIDHAVNAGLSFINAAPYASGMLAKQ
VSARPRYQYRAPSPEIVRTTAWLHQECARFHVPLAALALQFSTRDPRISSTVVGVSAPERVDELVENEQREIPSELWDSV
RERLVLPPTVT

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase family [H]

Homologues:

Organism=Escherichia coli, GI1788070, Length=305, Percent_Identity=25.9016393442623, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI87081735, Length=261, Percent_Identity=26.0536398467433, Blast_Score=65, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24646155, Length=283, Percent_Identity=27.9151943462898, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24646159, Length=278, Percent_Identity=25.8992805755396, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: =1.1.1.107 [H]

Molecular weight: Translated: 45347; Mature: 45215

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRLLYLIFVRVCGWLVLLGRSSAAKDLELLVLRHEVTVLRRTQPRPRWDWADRAVLNQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
TRSRNGGVWPPATTRHPKATPQDSTCADPSSGYAACQPHDPNLEQTLGTDGPEVPVVCVG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCEEEEC
TSPLGGLPTIYGYDVEAGQAVATIRRVLESPIDFIDTSNEYANGESERRIGEALRSAAGG
CCCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
PGNVVLATKADPALWATEFPGSRVRESFRESTERLGVDRFEVFYLHDPERFDFGYMTAPG
CCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCC
GAVEAMVQLRTDGLATAIGVAGSDISEMRRYVDLGVFDVILNHNRYTLLDRSADALIDHA
HHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCEEEEECCCHHHHHHHH
VNAGLSFINAAPYASGMLAKQVSARPRYQYRAPSPEIVRTTAWLHQECARFHVPLAALAL
HHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
QFSTRDPRISSTVVGVSAPERVDELVENEQREIPSELWDSVRERLVLPPTVT
HHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SVRLLYLIFVRVCGWLVLLGRSSAAKDLELLVLRHEVTVLRRTQPRPRWDWADRAVLNQ
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
TRSRNGGVWPPATTRHPKATPQDSTCADPSSGYAACQPHDPNLEQTLGTDGPEVPVVCVG
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCEEEEC
TSPLGGLPTIYGYDVEAGQAVATIRRVLESPIDFIDTSNEYANGESERRIGEALRSAAGG
CCCCCCCCCEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
PGNVVLATKADPALWATEFPGSRVRESFRESTERLGVDRFEVFYLHDPERFDFGYMTAPG
CCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEECCC
GAVEAMVQLRTDGLATAIGVAGSDISEMRRYVDLGVFDVILNHNRYTLLDRSADALIDHA
HHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCEEEEECCCHHHHHHHH
VNAGLSFINAAPYASGMLAKQVSARPRYQYRAPSPEIVRTTAWLHQECARFHVPLAALAL
HHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
QFSTRDPRISSTVVGVSAPERVDELVENEQREIPSELWDSVRERLVLPPTVT
HHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA