| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312302
Identifier: 158312302
GI number: 158312302
Start: 520355
End: 520738
Strand: Direct
Name: 158312302
Synonym: Franean1_0439
Alternate gene names: NA
Gene position: 520355-520738 (Clockwise)
Preceding gene: 158312300
Following gene: 158312303
Centisome position: 5.79
GC content: 70.57
Gene sequence:
>384_bases ATGCCCCGGCCCCTGGCATGCCCCGCCTTCGCCGGACGCAACAGAGCCCTCTCGGACAACGGGCGCTGCCGGTGCAACAG TGCCGTCACGACTGATCAGGATCCGCGGTGCCGGACTCCGCCGATGCAACAGGCTTCCGACGGTAGACTCGTGGCCATGG CCGTCGTCAGCCGCATCACCGCCGATCCCGCGATCATGGCGGGCGCGCCGGCGATTCGCGGTACCCGGGTCACCGTGTCC GCGGTGCTGGGCCAGCTCGCGGCCGGCTCGACGGTCGAGGAGCTGCTCGCCGACTATCCGTCGCTCACCCGCGACGACGT GCTCGCCGCTCTCGCGTTCGCGGCGGAGACAATGCCGCAAGAGCGTCCGTTCATCGCCGCATGA
Upstream 100 bases:
>100_bases AGACGAGGCGGAGCCGCGGTCGGGTGTCCGTGTCGGTACGGCCGAGTAGCAGGCGGAGTCTGGGAAGGGTGCAGGCTCGC CGCAGCCGTCTGACCAGCAG
Downstream 100 bases:
>100_bases GGTTTCTCGTCGACGAGAACCTCTCACCGCGGGTCGCCGAACTGCTGCGCGACAAGGGCATCGACACAACACACGTCCTC GAGCACGGGCTTGGCGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MPRPLACPAFAGRNRALSDNGRCRCNSAVTTDQDPRCRTPPMQQASDGRLVAMAVVSRITADPAIMAGAPAIRGTRVTVS AVLGQLAAGSTVEELLADYPSLTRDDVLAALAFAAETMPQERPFIAA
Sequences:
>Translated_127_residues MPRPLACPAFAGRNRALSDNGRCRCNSAVTTDQDPRCRTPPMQQASDGRLVAMAVVSRITADPAIMAGAPAIRGTRVTVS AVLGQLAAGSTVEELLADYPSLTRDDVLAALAFAAETMPQERPFIAA >Mature_126_residues PRPLACPAFAGRNRALSDNGRCRCNSAVTTDQDPRCRTPPMQQASDGRLVAMAVVSRITADPAIMAGAPAIRGTRVTVSA VLGQLAAGSTVEELLADYPSLTRDDVLAALAFAAETMPQERPFIAA
Specific function: Unknown
COG id: COG2442
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13311; Mature: 13180
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPLACPAFAGRNRALSDNGRCRCNSAVTTDQDPRCRTPPMQQASDGRLVAMAVVSRIT CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC ADPAIMAGAPAIRGTRVTVSAVLGQLAAGSTVEELLADYPSLTRDDVLAALAFAAETMPQ CCCHHHCCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC ERPFIAA CCCCCCC >Mature Secondary Structure PRPLACPAFAGRNRALSDNGRCRCNSAVTTDQDPRCRTPPMQQASDGRLVAMAVVSRIT CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC ADPAIMAGAPAIRGTRVTVSAVLGQLAAGSTVEELLADYPSLTRDDVLAALAFAAETMPQ CCCHHHCCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC ERPFIAA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA