Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158312297

Identifier: 158312297

GI number: 158312297

Start: 513767

End: 514804

Strand: Direct

Name: 158312297

Synonym: Franean1_0434

Alternate gene names: NA

Gene position: 513767-514804 (Clockwise)

Preceding gene: 158312296

Following gene: 158312298

Centisome position: 5.72

GC content: 66.67

Gene sequence:

>1038_bases
ATGCGGACGTCCTTCACGCCCGGCCAGGTCTGGCTCGACACCGACGGCAAGCGGATCCAGGCCCACGGTGGCTCCCTTCT
GCACGTCGACGGCACGTTCTACTGGTACGGCGAGAACAAGGAACGCTCGACGCCGGGCAGCGGCATCTGGCACTGGGGAG
TCCGCTGCTATTCGTCACCGGACCTCTACAACTGGACCGACCGTGGCCTGATCATCCCGCCCGAGGTGGACGACCCCTCC
GCACCACTGCACCCGGCCATGTCGATGGACCGGCCGCATATCCTGCGTCATTCGGGCTCGTGGCGGTACGTCTGCTGGGT
CAAGGTCATGTCCCCGGCCGGGCAACGCTCGACGGTCCTCGTGGCGGACGACATTCTGGGCCCGTACCAAATGGTCGGGA
AAGATCTGAAGCCCTTGGGCATGAACGCCGGGGACTTCGACCTGGTCGTCGACCCGACCGACGGCAAGGGCTACTACTAC
TTCGAGCGCGTGCACAGCGAGCTGATCTGTGCCGACCTGACCGACGACTACATCGGCGTCACCGGGTATTACTCCACCCA
CTTCCCGCTGGTGCAACCGCCGTACGTCCGGGAAGCGCCCGCCTATTTCGCCCGGAACGGCCGGCACTATCTCGTCACCT
CGGGCACGACCGGCTACTACCCGAACCCGTCCGAGGTCGCCGTCGCCCCCAGCTACCACGGCCCGTGGACGGTCCTCAAC
GACCCGCACCCCGGCGACCCGAGCCGTAGTTCCTACCAGTCGCAAATCAGCTCGGTCTTCCGGCACCCGCACAAGCAGGA
CCTGTACATCGCGCTGGCCGACCGCTGGCTGCCGCGCTACACCGCTTCCAGCGAGGCGGCGATCGCCATGCACGCCGAGC
GGTTCGCCCCGTTCGGCGGCCATCACGACGGCCCGTGGTCCGAGCTCACGGAGATCGACACGTCGATCGCCGACTACGTC
TGGCTACCCTTCCGGTTCGACGGGGAACGCGCCCTCCTCGACTGGCACGACGAATGGCGTGTGGAGGACTACCCATGA

Upstream 100 bases:

>100_bases
GGGAGTGCACCGTCGAGCGGCTGCCCGGCACGTACGAAACCCTCGCGGTCGTCCCGCTGCCGGCCAAGCCCTACCAAGCC
GTGCGGCTGGTGAAGGCCTG

Downstream 100 bases:

>100_bases
GCCCCACCTGGCGCGACGAGCACCTGGAGGCCGGCCACCGGGCCGAGCTGCTGCTGGCCGAGATGACCACCGCCGAGAAA
TGCCATCAGCTCACCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-Xylosidase; Glycoside Hydrolase Family; Ricin B Lectin; Licheninase; Family; Coagulation Factor 5/8 Type Domain Protein; Glycosyl Hydrolase Family; Ricin-Type Beta-Trefoil Lectin Domain Protein; Beta-Galactosidase; S-Layer Domain Protein; Glycoside Hydrolase Family Beta-Glycosidase; Xylosidase/Arabinofuranosidase; Cna B Domain Protein

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRTSFTPGQVWLDTDGKRIQAHGGSLLHVDGTFYWYGENKERSTPGSGIWHWGVRCYSSPDLYNWTDRGLIIPPEVDDPS
APLHPAMSMDRPHILRHSGSWRYVCWVKVMSPAGQRSTVLVADDILGPYQMVGKDLKPLGMNAGDFDLVVDPTDGKGYYY
FERVHSELICADLTDDYIGVTGYYSTHFPLVQPPYVREAPAYFARNGRHYLVTSGTTGYYPNPSEVAVAPSYHGPWTVLN
DPHPGDPSRSSYQSQISSVFRHPHKQDLYIALADRWLPRYTASSEAAIAMHAERFAPFGGHHDGPWSELTEIDTSIADYV
WLPFRFDGERALLDWHDEWRVEDYP

Sequences:

>Translated_345_residues
MRTSFTPGQVWLDTDGKRIQAHGGSLLHVDGTFYWYGENKERSTPGSGIWHWGVRCYSSPDLYNWTDRGLIIPPEVDDPS
APLHPAMSMDRPHILRHSGSWRYVCWVKVMSPAGQRSTVLVADDILGPYQMVGKDLKPLGMNAGDFDLVVDPTDGKGYYY
FERVHSELICADLTDDYIGVTGYYSTHFPLVQPPYVREAPAYFARNGRHYLVTSGTTGYYPNPSEVAVAPSYHGPWTVLN
DPHPGDPSRSSYQSQISSVFRHPHKQDLYIALADRWLPRYTASSEAAIAMHAERFAPFGGHHDGPWSELTEIDTSIADYV
WLPFRFDGERALLDWHDEWRVEDYP
>Mature_345_residues
MRTSFTPGQVWLDTDGKRIQAHGGSLLHVDGTFYWYGENKERSTPGSGIWHWGVRCYSSPDLYNWTDRGLIIPPEVDDPS
APLHPAMSMDRPHILRHSGSWRYVCWVKVMSPAGQRSTVLVADDILGPYQMVGKDLKPLGMNAGDFDLVVDPTDGKGYYY
FERVHSELICADLTDDYIGVTGYYSTHFPLVQPPYVREAPAYFARNGRHYLVTSGTTGYYPNPSEVAVAPSYHGPWTVLN
DPHPGDPSRSSYQSQISSVFRHPHKQDLYIALADRWLPRYTASSEAAIAMHAERFAPFGGHHDGPWSELTEIDTSIADYV
WLPFRFDGERALLDWHDEWRVEDYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39172; Mature: 39172

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSFTPGQVWLDTDGKRIQAHGGSLLHVDGTFYWYGENKERSTPGSGIWHWGVRCYSSP
CCCCCCCCEEEECCCCCEEEECCCCEEEECCEEEEECCCCCCCCCCCCEEEECEEEECCC
DLYNWTDRGLIIPPEVDDPSAPLHPAMSMDRPHILRHSGSWRYVCWVKVMSPAGQRSTVL
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEECCCCCCCEEE
VADDILGPYQMVGKDLKPLGMNAGDFDLVVDPTDGKGYYYFERVHSELICADLTDDYIGV
EECCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEHEECCCCEEEEECCCCCEEE
TGYYSTHFPLVQPPYVREAPAYFARNGRHYLVTSGTTGYYPNPSEVAVAPSYHGPWTVLN
EEEECCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCCCCEEECC
DPHPGDPSRSSYQSQISSVFRHPHKQDLYIALADRWLPRYTASSEAAIAMHAERFAPFGG
CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHCCCCCC
HHDGPWSELTEIDTSIADYVWLPFRFDGERALLDWHDEWRVEDYP
CCCCCHHHHHHHHHHHHCEEEEEEEECCCEEEEECCCCCEECCCC
>Mature Secondary Structure
MRTSFTPGQVWLDTDGKRIQAHGGSLLHVDGTFYWYGENKERSTPGSGIWHWGVRCYSSP
CCCCCCCCEEEECCCCCEEEECCCCEEEECCEEEEECCCCCCCCCCCCEEEECEEEECCC
DLYNWTDRGLIIPPEVDDPSAPLHPAMSMDRPHILRHSGSWRYVCWVKVMSPAGQRSTVL
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEECCCCCCCEEE
VADDILGPYQMVGKDLKPLGMNAGDFDLVVDPTDGKGYYYFERVHSELICADLTDDYIGV
EECCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEHEECCCCEEEEECCCCCEEE
TGYYSTHFPLVQPPYVREAPAYFARNGRHYLVTSGTTGYYPNPSEVAVAPSYHGPWTVLN
EEEECCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCCCCEEEECCCCCCEEECC
DPHPGDPSRSSYQSQISSVFRHPHKQDLYIALADRWLPRYTASSEAAIAMHAERFAPFGG
CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHCCCCCC
HHDGPWSELTEIDTSIADYVWLPFRFDGERALLDWHDEWRVEDYP
CCCCCHHHHHHHHHHHHCEEEEEEEECCCEEEEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA