Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158312296

Identifier: 158312296

GI number: 158312296

Start: 512058

End: 513767

Strand: Direct

Name: 158312296

Synonym: Franean1_0433

Alternate gene names: NA

Gene position: 512058-513767 (Clockwise)

Preceding gene: 158312295

Following gene: 158312297

Centisome position: 5.7

GC content: 68.89

Gene sequence:

>1710_bases
ATGCTGACGCATTTCATCACCGTCGGGCAGGTGCTCGACGCGCCGGGCGGACGAGACGTACTGGAACGGTTCCTGCCGCA
GGCCGTCGACCGCGCCGACGTCCGTGAGCTTCTCGTCCTGTTCTTCCTGCGGGTGACCCCGGGGCTGCGCGATGACGAGC
AGGCCAGGGCGGCGTTCTGGGCCGAGATCGACGCGCTGATGGAACCGGTCATTCTCCGGCCGCACGCCGCCGCCATCGCG
CCATCGGCGGTCGGCGTATCGGCGCCGCACGCGTCGGCGCCGTGGACCGTCGCAGGCTCACCCACGCGGTGGGGGCTGCT
GGAGATCCAGCTGAGCGGTCCGTCGGACGGGAACCCGTTCATCGACGTCGAGCTGACCGCCGAGTTCCGGTGCGGCGAGC
GGTCCTGGACGGTCGGCGGCTTCTATGACGGCGACGGAACCTACCGGCTGCGGGCGCTCGCCGAACAGGAGGGGACGTGG
CAGTTCGTGACCTCCTCCACGACCCCGGCGCTGGACGGGATCGAGGGCGAGGTGACCGTAGGCCCGGCGGCGCCGGGAGC
GCACGGGCCGGTCCGGGTGGACGGCTTCCATTTTGCGTACGCGGACGGAACCCGTTACCGGCCGTGGGGGACCACCGCGT
ACGCCTGGAACCACCAGGACGACAAGACGCAGGAGCAGACGCTGGAAACGCTGGCCGCGTCGCCCTTCACCAAGCTGCGT
ATGTGCCTGTTCCCCAAGCATTTCGTCTTCAACAACGCCGAGCCCGTCCAGTTCCCGTTCCCACGGGTCAACGGCTCCTT
CGACCACACGCGGTTCGACGTCGAGTTCTTCGCGCGCCTCGACGAGCAGGTTCGCCGTCTCGGTGAACTCGGCATCGAGG
CCGACGTCATCCTCTTCCACCCGTACGACAAATGGGGTTTCTCCGATCTGGGACGGGCGGTGGACGAGCGAGTCGTCAGG
TACCTCGTGCGGCGCCTGGCCGGCTACGCGCACGTCTGGTTCTCGCTGGCCAACGAGTACGACGCGGTACCCGGCAAGAC
GATCGCGGACTGGGACCGGATCGGTGAGACCCTCACCGCCGAGGACCCGCACGGGCACCCGGTGTCCATCCACAACTTCA
TCGAGCACTTCGACCACACCCGGCCGTGGATCACCCACGCCAGCGTCCAGCACGGCCGGGTCGAGGAGGTCACCGGCTGG
CGCGAGCGCTGGGGCAAGCCGGTGGTCATCGACGAGACCGGTTACGAGGGCGACCTCGAGTTCGACTGGGGCAACCTGAC
CGGCGAGGAGATGCTGCGCCGATTCTGGGAAGGCGCGGTGCGCGGCGGTTACGTCGGTCACGGCGAAACGTACTGGAACG
CCGAGGAGAGGATCTGGTGGGCGAAGGGCGGTCAGTTGACCGGCACGAGCCCGCGCCGGATCGGCTTCCTGGCCGAGATC
GTCGCCGCCTCACCGACCGGTGTGCTCGAGCCTCTACCGTCCGACTACGACCTGCCGTGGGCCGGTGTCCAGGACGAGTA
CCTGGTCAACTACTACGGCCTCGGCCGGCCGAGGGAGCGTCATATCCTCCTGCCCCCGGGCCGCTGGCACGTTGACGTCC
TGGACACCTGGGAGTGCACCGTCGAGCGGCTGCCCGGCACGTACGAAACCCTCGCGGTCGTCCCGCTGCCGGCCAAGCCC
TACCAAGCCGTGCGGCTGGTGAAGGCCTGA

Upstream 100 bases:

>100_bases
CAAAGTGGCCGCGTCCCGGTCCGGCCACGCGGAGTCGTTCGCCATGGTCGAAAACCTGGATCGGGTCCGCGTCGTCGTCC
ACCCCCGCTGAGGAGTCTCC

Downstream 100 bases:

>100_bases
TGCGGACGTCCTTCACGCCCGGCCAGGTCTGGCTCGACACCGACGGCAAGCGGATCCAGGCCCACGGTGGCTCCCTTCTG
CACGTCGACGGCACGTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MLTHFITVGQVLDAPGGRDVLERFLPQAVDRADVRELLVLFFLRVTPGLRDDEQARAAFWAEIDALMEPVILRPHAAAIA
PSAVGVSAPHASAPWTVAGSPTRWGLLEIQLSGPSDGNPFIDVELTAEFRCGERSWTVGGFYDGDGTYRLRALAEQEGTW
QFVTSSTTPALDGIEGEVTVGPAAPGAHGPVRVDGFHFAYADGTRYRPWGTTAYAWNHQDDKTQEQTLETLAASPFTKLR
MCLFPKHFVFNNAEPVQFPFPRVNGSFDHTRFDVEFFARLDEQVRRLGELGIEADVILFHPYDKWGFSDLGRAVDERVVR
YLVRRLAGYAHVWFSLANEYDAVPGKTIADWDRIGETLTAEDPHGHPVSIHNFIEHFDHTRPWITHASVQHGRVEEVTGW
RERWGKPVVIDETGYEGDLEFDWGNLTGEEMLRRFWEGAVRGGYVGHGETYWNAEERIWWAKGGQLTGTSPRRIGFLAEI
VAASPTGVLEPLPSDYDLPWAGVQDEYLVNYYGLGRPRERHILLPPGRWHVDVLDTWECTVERLPGTYETLAVVPLPAKP
YQAVRLVKA

Sequences:

>Translated_569_residues
MLTHFITVGQVLDAPGGRDVLERFLPQAVDRADVRELLVLFFLRVTPGLRDDEQARAAFWAEIDALMEPVILRPHAAAIA
PSAVGVSAPHASAPWTVAGSPTRWGLLEIQLSGPSDGNPFIDVELTAEFRCGERSWTVGGFYDGDGTYRLRALAEQEGTW
QFVTSSTTPALDGIEGEVTVGPAAPGAHGPVRVDGFHFAYADGTRYRPWGTTAYAWNHQDDKTQEQTLETLAASPFTKLR
MCLFPKHFVFNNAEPVQFPFPRVNGSFDHTRFDVEFFARLDEQVRRLGELGIEADVILFHPYDKWGFSDLGRAVDERVVR
YLVRRLAGYAHVWFSLANEYDAVPGKTIADWDRIGETLTAEDPHGHPVSIHNFIEHFDHTRPWITHASVQHGRVEEVTGW
RERWGKPVVIDETGYEGDLEFDWGNLTGEEMLRRFWEGAVRGGYVGHGETYWNAEERIWWAKGGQLTGTSPRRIGFLAEI
VAASPTGVLEPLPSDYDLPWAGVQDEYLVNYYGLGRPRERHILLPPGRWHVDVLDTWECTVERLPGTYETLAVVPLPAKP
YQAVRLVKA
>Mature_569_residues
MLTHFITVGQVLDAPGGRDVLERFLPQAVDRADVRELLVLFFLRVTPGLRDDEQARAAFWAEIDALMEPVILRPHAAAIA
PSAVGVSAPHASAPWTVAGSPTRWGLLEIQLSGPSDGNPFIDVELTAEFRCGERSWTVGGFYDGDGTYRLRALAEQEGTW
QFVTSSTTPALDGIEGEVTVGPAAPGAHGPVRVDGFHFAYADGTRYRPWGTTAYAWNHQDDKTQEQTLETLAASPFTKLR
MCLFPKHFVFNNAEPVQFPFPRVNGSFDHTRFDVEFFARLDEQVRRLGELGIEADVILFHPYDKWGFSDLGRAVDERVVR
YLVRRLAGYAHVWFSLANEYDAVPGKTIADWDRIGETLTAEDPHGHPVSIHNFIEHFDHTRPWITHASVQHGRVEEVTGW
RERWGKPVVIDETGYEGDLEFDWGNLTGEEMLRRFWEGAVRGGYVGHGETYWNAEERIWWAKGGQLTGTSPRRIGFLAEI
VAASPTGVLEPLPSDYDLPWAGVQDEYLVNYYGLGRPRERHILLPPGRWHVDVLDTWECTVERLPGTYETLAVVPLPAKP
YQAVRLVKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63936; Mature: 63936

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHFITVGQVLDAPGGRDVLERFLPQAVDRADVRELLVLFFLRVTPGLRDDEQARAAFW
CCCEEEEHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AEIDALMEPVILRPHAAAIAPSAVGVSAPHASAPWTVAGSPTRWGLLEIQLSGPSDGNPF
HHHHHHHCCEEECCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCE
IDVELTAEFRCGERSWTVGGFYDGDGTYRLRALAEQEGTWQFVTSSTTPALDGIEGEVTV
EEEEEEEEEECCCCCEEECEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEE
GPAAPGAHGPVRVDGFHFAYADGTRYRPWGTTAYAWNHQDDKTQEQTLETLAASPFTKLR
CCCCCCCCCCEEECCEEEEECCCCEECCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHH
MCLFPKHFVFNNAEPVQFPFPRVNGSFDHTRFDVEFFARLDEQVRRLGELGIEADVILFH
HHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEC
PYDKWGFSDLGRAVDERVVRYLVRRLAGYAHVWFSLANEYDAVPGKTIADWDRIGETLTA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEC
EDPHGHPVSIHNFIEHFDHTRPWITHASVQHGRVEEVTGWRERWGKPVVIDETGYEGDLE
CCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCHHHHCCCCEEEECCCCCCCEE
FDWGNLTGEEMLRRFWEGAVRGGYVGHGETYWNAEERIWWAKGGQLTGTSPRRIGFLAEI
EECCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEECCCEECCCCCHHHHHHHHH
VAASPTGVLEPLPSDYDLPWAGVQDEYLVNYYGLGRPRERHILLPPGRWHVDVLDTWECT
HHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEECCCHHH
VERLPGTYETLAVVPLPAKPYQAVRLVKA
HHHCCCCCCEEEEEECCCCCHHHHEEECC
>Mature Secondary Structure
MLTHFITVGQVLDAPGGRDVLERFLPQAVDRADVRELLVLFFLRVTPGLRDDEQARAAFW
CCCEEEEHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AEIDALMEPVILRPHAAAIAPSAVGVSAPHASAPWTVAGSPTRWGLLEIQLSGPSDGNPF
HHHHHHHCCEEECCCHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCCCCCCE
IDVELTAEFRCGERSWTVGGFYDGDGTYRLRALAEQEGTWQFVTSSTTPALDGIEGEVTV
EEEEEEEEEECCCCCEEECEEECCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEE
GPAAPGAHGPVRVDGFHFAYADGTRYRPWGTTAYAWNHQDDKTQEQTLETLAASPFTKLR
CCCCCCCCCCEEECCEEEEECCCCEECCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHH
MCLFPKHFVFNNAEPVQFPFPRVNGSFDHTRFDVEFFARLDEQVRRLGELGIEADVILFH
HHHCCHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEC
PYDKWGFSDLGRAVDERVVRYLVRRLAGYAHVWFSLANEYDAVPGKTIADWDRIGETLTA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEC
EDPHGHPVSIHNFIEHFDHTRPWITHASVQHGRVEEVTGWRERWGKPVVIDETGYEGDLE
CCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCHHHHCCCCEEEECCCCCCCEE
FDWGNLTGEEMLRRFWEGAVRGGYVGHGETYWNAEERIWWAKGGQLTGTSPRRIGFLAEI
EECCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEECCCEECCCCCHHHHHHHHH
VAASPTGVLEPLPSDYDLPWAGVQDEYLVNYYGLGRPRERHILLPPGRWHVDVLDTWECT
HHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEECCCHHH
VERLPGTYETLAVVPLPAKPYQAVRLVKA
HHHCCCCCCEEEEEECCCCCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA