| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158312295
Identifier: 158312295
GI number: 158312295
Start: 510321
End: 512048
Strand: Direct
Name: 158312295
Synonym: Franean1_0432
Alternate gene names: NA
Gene position: 510321-512048 (Clockwise)
Preceding gene: 158312294
Following gene: 158312296
Centisome position: 5.68
GC content: 71.93
Gene sequence:
>1728_bases ATGAAAGCTGTCCTGAGCTCTCTCCTTCTCACCGCCGGCCTCATCCTCGTCCCGGCCGGTGCCGCGTCGGCCGCACCGCC CGACTGCGCCGCCGCCACGCCCGGCGGGCCGGTTCAGGTCACGCCCGGCTGTGTCGACCCGCTCTACGCCGACCCTGTCG TCGACAGCGAGCAGGACCTGAGCACCCCGGTCACGCATCGCCGGGTGTCCGGGCACTTCGACGGTACGGGAGTCAAGTTC ACGATCTACCTGCCGCCGGCCAGGCAGTGGCAGGGCCGCTTCTTCCAGTACACGTACCCGATCTCGACCGAGAACGCCCT CGACCGGTCGGTCGCCTTCGGGGCCGCCAGCGGCGCGTACACCCTCCAGACCAGCGGCACAGGCGGCTACCGCCACGCCG CCGCGGCCGCGAAGTTCGCCGAGACCGCGGCGGCCGCCTACTACCGGTCCGGGTCCCGGCGAATCTACGGCTACCTGTAC GGCCCGTCCGGCGGCTCCTTCCAGACCGTCGGCGCCATCGAGAACACCACCGGAGTGTGGGAGGGCGCGGTCCCGGTCGT GCTCGGCGTGCCCACCTCCATCCCCATCAACTTCTTCGTGCGCGCGCAGGCCCGGATGGTCCTGCGGGACGTGGCCGACC AGATCGCGGACGCCGTACGCCCGGGCGGCTCCGGTAACCCGTACACCGGCCTCACACCGGTGCAGGCGGCGATGCTGCAC GAGACCACGAGCCTGGGCGTTCCACTCAAGGCCTGGGCCGACCCTGACTACGTTCTCGGCCTGTCGGCGCCGGACGGCCT GCTCGGCTTCGGCGCCGTGATCAAGCAGCTCGACCCCACGTACGCCGACGACTTCTGGTCCAAGCCCGGCTACCTCGGCA CCGAGCAGTCGGCGCTCGGCGACATCGTCCGGGCCGAGCTTGCCCGGACCGGCGACCGCTGGGCCGTCGCCCTGCCCTCC TACTACCGCCACCAGGTCCCGCCGGCGGGCGAGGGTTACGACGTCTTCGACTCGCTGCGCGGCCGCTATCCGCAGCGGCC GTTGCTGGTCGGCCCGGCGATCGCGACCAGCGTCGCCGGCGGCGGCACCTACACCGGCCGGATCAACGGCAAGGTCATCG TGGTCGACAACCTGGTCGACAGCGACGCGTACCCGTGGCACGCCGACTGGTACGCCCGCCGCGTCCAGTCCCCGGGCGAC TTCCGCCTGTACTACAACGACAACGCCGACCATCTCGAAGGCCCGGTCACCGGGGCCAAGGCCAGCCGGATCGTCTCGTA CGACCCGATCGTGGAGCAGGCGCTGCGCGACCTCGCGGCCTGGGCCGAGCGCGGCGTGCGCCCACCGCAGTCCACGCGTT ACACGGTCACCGGCGGCCAGGTGCGCGTCCCGTCGACGGCCGCCCAGCGGCGCGGCATCCAGCCCGTCGTCGACCTCACC GTCCGCGGCCGCGACCGCGTCGACGTCAATGCCGGCGAGAAGGTCGACTTCCGGGCCCAGGTCGCGACACCGCCCGGCGC CGGAAGGATCGTCTCCGCCGGCTGGGACGTCACCGGATCCGGCACCTTCACACCGGCCACCACGGGCTTCACCGCCAGCC ACCGGTTCACCGAACCCGGCACCTACTACGTGTCCCTCAAAGTGGCCGCGTCCCGGTCCGGCCACGCGGAGTCGTTCGCC ATGGTCGAAAACCTGGATCGGGTCCGCGTCGTCGTCCACCCCCGCTGA
Upstream 100 bases:
>100_bases GCTACCTCTCCACCGAAGTCGCGTCCGGGTTCACCGGCCGCATGCTCGCCACCGCCGGACCGCACGTCCGGTCGGTGACC TACCGCCCCCAGGAGCAGCC
Downstream 100 bases:
>100_bases GGAGTCTCCATGCTGACGCATTTCATCACCGTCGGGCAGGTGCTCGACGCGCCGGGCGGACGAGACGTACTGGAACGGTT CCTGCCGCAGGCCGTCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MKAVLSSLLLTAGLILVPAGAASAAPPDCAAATPGGPVQVTPGCVDPLYADPVVDSEQDLSTPVTHRRVSGHFDGTGVKF TIYLPPARQWQGRFFQYTYPISTENALDRSVAFGAASGAYTLQTSGTGGYRHAAAAAKFAETAAAAYYRSGSRRIYGYLY GPSGGSFQTVGAIENTTGVWEGAVPVVLGVPTSIPINFFVRAQARMVLRDVADQIADAVRPGGSGNPYTGLTPVQAAMLH ETTSLGVPLKAWADPDYVLGLSAPDGLLGFGAVIKQLDPTYADDFWSKPGYLGTEQSALGDIVRAELARTGDRWAVALPS YYRHQVPPAGEGYDVFDSLRGRYPQRPLLVGPAIATSVAGGGTYTGRINGKVIVVDNLVDSDAYPWHADWYARRVQSPGD FRLYYNDNADHLEGPVTGAKASRIVSYDPIVEQALRDLAAWAERGVRPPQSTRYTVTGGQVRVPSTAAQRRGIQPVVDLT VRGRDRVDVNAGEKVDFRAQVATPPGAGRIVSAGWDVTGSGTFTPATTGFTASHRFTEPGTYYVSLKVAASRSGHAESFA MVENLDRVRVVVHPR
Sequences:
>Translated_575_residues MKAVLSSLLLTAGLILVPAGAASAAPPDCAAATPGGPVQVTPGCVDPLYADPVVDSEQDLSTPVTHRRVSGHFDGTGVKF TIYLPPARQWQGRFFQYTYPISTENALDRSVAFGAASGAYTLQTSGTGGYRHAAAAAKFAETAAAAYYRSGSRRIYGYLY GPSGGSFQTVGAIENTTGVWEGAVPVVLGVPTSIPINFFVRAQARMVLRDVADQIADAVRPGGSGNPYTGLTPVQAAMLH ETTSLGVPLKAWADPDYVLGLSAPDGLLGFGAVIKQLDPTYADDFWSKPGYLGTEQSALGDIVRAELARTGDRWAVALPS YYRHQVPPAGEGYDVFDSLRGRYPQRPLLVGPAIATSVAGGGTYTGRINGKVIVVDNLVDSDAYPWHADWYARRVQSPGD FRLYYNDNADHLEGPVTGAKASRIVSYDPIVEQALRDLAAWAERGVRPPQSTRYTVTGGQVRVPSTAAQRRGIQPVVDLT VRGRDRVDVNAGEKVDFRAQVATPPGAGRIVSAGWDVTGSGTFTPATTGFTASHRFTEPGTYYVSLKVAASRSGHAESFA MVENLDRVRVVVHPR >Mature_575_residues MKAVLSSLLLTAGLILVPAGAASAAPPDCAAATPGGPVQVTPGCVDPLYADPVVDSEQDLSTPVTHRRVSGHFDGTGVKF TIYLPPARQWQGRFFQYTYPISTENALDRSVAFGAASGAYTLQTSGTGGYRHAAAAAKFAETAAAAYYRSGSRRIYGYLY GPSGGSFQTVGAIENTTGVWEGAVPVVLGVPTSIPINFFVRAQARMVLRDVADQIADAVRPGGSGNPYTGLTPVQAAMLH ETTSLGVPLKAWADPDYVLGLSAPDGLLGFGAVIKQLDPTYADDFWSKPGYLGTEQSALGDIVRAELARTGDRWAVALPS YYRHQVPPAGEGYDVFDSLRGRYPQRPLLVGPAIATSVAGGGTYTGRINGKVIVVDNLVDSDAYPWHADWYARRVQSPGD FRLYYNDNADHLEGPVTGAKASRIVSYDPIVEQALRDLAAWAERGVRPPQSTRYTVTGGQVRVPSTAAQRRGIQPVVDLT VRGRDRVDVNAGEKVDFRAQVATPPGAGRIVSAGWDVTGSGTFTPATTGFTASHRFTEPGTYYVSLKVAASRSGHAESFA MVENLDRVRVVVHPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61138; Mature: 61138
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: PS50093 PKD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVLSSLLLTAGLILVPAGAASAAPPDCAAATPGGPVQVTPGCVDPLYADPVVDSEQDL CHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC STPVTHRRVSGHFDGTGVKFTIYLPPARQWQGRFFQYTYPISTENALDRSVAFGAASGAY CCCHHHHEECCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHEEECCCCEE TLQTSGTGGYRHAAAAAKFAETAAAAYYRSGSRRIYGYLYGPSGGSFQTVGAIENTTGVW EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCC EGAVPVVLGVPTSIPINFFVRAQARMVLRDVADQIADAVRPGGSGNPYTGLTPVQAAMLH CCCCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH ETTSLGVPLKAWADPDYVLGLSAPDGLLGFGAVIKQLDPTYADDFWSKPGYLGTEQSALG HHHHCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHH DIVRAELARTGDRWAVALPSYYRHQVPPAGEGYDVFDSLRGRYPQRPLLVGPAIATSVAG HHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEECCHHHHHCCC GGTYTGRINGKVIVVDNLVDSDAYPWHADWYARRVQSPGDFRLYYNDNADHLEGPVTGAK CCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCC ASRIVSYDPIVEQALRDLAAWAERGVRPPQSTRYTVTGGQVRVPSTAAQRRGIQPVVDLT CCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCHHHHHCCCCCEEEEE VRGRDRVDVNAGEKVDFRAQVATPPGAGRIVSAGWDVTGSGTFTPATTGFTASHRFTEPG ECCCCEEECCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC TYYVSLKVAASRSGHAESFAMVENLDRVRVVVHPR EEEEEEEEEECCCCCCHHHHHHHCCCEEEEEEECC >Mature Secondary Structure MKAVLSSLLLTAGLILVPAGAASAAPPDCAAATPGGPVQVTPGCVDPLYADPVVDSEQDL CHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC STPVTHRRVSGHFDGTGVKFTIYLPPARQWQGRFFQYTYPISTENALDRSVAFGAASGAY CCCHHHHEECCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHEEECCCCEE TLQTSGTGGYRHAAAAAKFAETAAAAYYRSGSRRIYGYLYGPSGGSFQTVGAIENTTGVW EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCC EGAVPVVLGVPTSIPINFFVRAQARMVLRDVADQIADAVRPGGSGNPYTGLTPVQAAMLH CCCCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH ETTSLGVPLKAWADPDYVLGLSAPDGLLGFGAVIKQLDPTYADDFWSKPGYLGTEQSALG HHHHCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHH DIVRAELARTGDRWAVALPSYYRHQVPPAGEGYDVFDSLRGRYPQRPLLVGPAIATSVAG HHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEECCHHHHHCCC GGTYTGRINGKVIVVDNLVDSDAYPWHADWYARRVQSPGDFRLYYNDNADHLEGPVTGAK CCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCC ASRIVSYDPIVEQALRDLAAWAERGVRPPQSTRYTVTGGQVRVPSTAAQRRGIQPVVDLT CCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCHHHHHCCCCCEEEEE VRGRDRVDVNAGEKVDFRAQVATPPGAGRIVSAGWDVTGSGTFTPATTGFTASHRFTEPG ECCCCEEECCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC TYYVSLKVAASRSGHAESFAMVENLDRVRVVVHPR EEEEEEEEEECCCCCCHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA