Click here to switch to the map view.

The map label for this gene is ychN [H]

Identifier: 157964049

GI number: 157964049

Start: 5152750

End: 5153106

Strand: Reverse

Name: ychN [H]

Synonym: Spea_4238

Alternate gene names: 157964049

Gene position: 5153106-5152750 (Counterclockwise)

Preceding gene: 157964050

Following gene: 157964048

Centisome position: 99.58

GC content: 41.18

Gene sequence:

>357_bases
ATGCAACACGTGCTTATTATCGTTAATGACGCCCCTTATGGCTCTGAAAAGCTGTTTAATGCGCTTCGTTTAGCTATACA
GCTTAATGAACAAGATTACTCTCCTGCTAAGGTGAGTATTTTTTTATTGTCTGATGCAGTGACAGCCGTTTTACCCAATC
AAAAGCCAGCCGAAGGTTATAATATTCAGCAGATGCTAGAGATAGTTATTGCACAAAAAACACAGGTTAAGTTCTGTAGT
TCCTGTATGTATGCTCGTGGATTGACAGACCTGAAGGTGGTTGAGGGCTGTGAGATGGCTACCATGGATGATCTTGCACA
ATGGGTACTTGTGGCAGATAAAACTATCAGCTTCTAA

Upstream 100 bases:

>100_bases
CTAAAACCTAGATTTATCTTTGAACGTGATCTGCGTAAGAATCCTGATTCGAATGGAGTGTTACCCTCTCGCACTAATCT
AACGTCAGAGAAACTTTCCC

Downstream 100 bases:

>100_bases
TACTTCTTCAGTTATAAGTCGAGTCGCTTTTAATACCCGTATCGCTTAAAATCAAAACTCAAATATAGCTCTCATTTTTC
TAATATTAGATAAAGCACTA

Product: DsrE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MQHVLIIVNDAPYGSEKLFNALRLAIQLNEQDYSPAKVSIFLLSDAVTAVLPNQKPAEGYNIQQMLEIVIAQKTQVKFCS
SCMYARGLTDLKVVEGCEMATMDDLAQWVLVADKTISF

Sequences:

>Translated_118_residues
MQHVLIIVNDAPYGSEKLFNALRLAIQLNEQDYSPAKVSIFLLSDAVTAVLPNQKPAEGYNIQQMLEIVIAQKTQVKFCS
SCMYARGLTDLKVVEGCEMATMDDLAQWVLVADKTISF
>Mature_118_residues
MQHVLIIVNDAPYGSEKLFNALRLAIQLNEQDYSPAKVSIFLLSDAVTAVLPNQKPAEGYNIQQMLEIVIAQKTQVKFCS
SCMYARGLTDLKVVEGCEMATMDDLAQWVLVADKTISF

Specific function: Unknown

COG id: COG1553

COG function: function code P; Uncharacterized conserved protein involved in intracellular sulfur reduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0989 [H]

Homologues:

Organism=Escherichia coli, GI1787471, Length=118, Percent_Identity=55.9322033898305, Blast_Score=140, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003787 [H]

Pfam domain/function: PF02635 DrsE [H]

EC number: NA

Molecular weight: Translated: 13113; Mature: 13113

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHVLIIVNDAPYGSEKLFNALRLAIQLNEQDYSPAKVSIFLLSDAVTAVLPNQKPAEGY
CCEEEEEEECCCCCHHHHHHHHHHHEEECCCCCCCCEEEEEEECCHHHEECCCCCCCCCC
NIQQMLEIVIAQKTQVKFCSSCMYARGLTDLKVVEGCEMATMDDLAQWVLVADKTISF
CHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQHVLIIVNDAPYGSEKLFNALRLAIQLNEQDYSPAKVSIFLLSDAVTAVLPNQKPAEGY
CCEEEEEEECCCCCHHHHHHHHHHHEEECCCCCCCCEEEEEEECCHHHEECCCCCCCCCC
NIQQMLEIVIAQKTQVKFCSSCMYARGLTDLKVVEGCEMATMDDLAQWVLVADKTISF
CHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]