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The map label for this gene is yibP [H]

Identifier: 157964029

GI number: 157964029

Start: 5125468

End: 5126601

Strand: Direct

Name: yibP [H]

Synonym: Spea_4218

Alternate gene names: 157964029

Gene position: 5125468-5126601 (Clockwise)

Preceding gene: 157964028

Following gene: 157964030

Centisome position: 99.05

GC content: 44.36

Gene sequence:

>1134_bases
TTGAACATTCGATTTTTTATCAAAGCCAGCATTATTGCTGGCTTTCTATCGCTTCCTTTAACGGTTAATGCGACCGATCT
TGAGCGCCGCCAGTCTGAGCTTAAATCTATCCAAGCCCAGATTAACAAGCAGCAATCAGAGGTTAAAAACACCAGTAAGC
AAAGGGAGCGATTAGTCTCTTTATTAAAAGCTGATGAAAAAGCGATTGCTCAAGCGGCAAGAAAAGTAAACACGACCAAG
CAAGACTTAGCCAAAACAGATAAGAAAATTGCAGAGCTAAGCACTAAACAAGCTCAATTAGAAAAGCTGAAAACCGCACA
ACAGAAATCTCTGTCAAATCAACTTGCAAGTGCCTATTTGGCTGGCAATCACGATTACAGCAAAATGCTGTTAAATCAGC
AGTCTCCTGCAAGTATAGAGCGCCTACTGGCTTATTACGAATACTTGAATAACGCTCGTATCGATTCGATAGAACAATTG
CAAACGACCTTGAAAGAGTTAGACCAAATTCAAGCGGATCAGCAAGAACAGCAAAGCCGTCTTAATAAGCTGGTACTCGA
CCGACAGCAGCAAGCTAAAAAGCTAAGCCAAGAGCAGTCACAAAGACAAAGTACTCTTACGCAACTACAGAGAACATTAA
GCAGCAGCGGCGCAAAGTTAGAACAACTTCAAATAGAAGAAGCTAGCCTTAAGCGAGTAGTAGAACAAGCAGTTACCGCT
ATGAAAAATAATCCTTCTTACGAGGGATTATCAAGCCGCAAGAAACTCAATTGGCCAGCTAACGGACGCATAAGATCAGC
CTTCGGTAGTAAGCGATCTGGGCAAGTAAAATGGAAAGGTGTCATCATTTCAGCCGATGAAGGACAAAATGTAAGCGCGA
TTGCTGGCGGTAAAGTTATTTACGCCGACTGGCTACGCGGTTTCGGTATGGTTTTAGTCGTCGATCACGGTAAAGGTTAC
ATGAGCCTATACGGCCATGCACAGGCCTTACTCAAGAATGCGGGCGACTCGGTTAGTAAGGGCGAGTCGATTGCTTTGGT
CGGACGTTCGGGTGGACAGACCGAGCCTGGCCTATACTTTGAGGTAAGGCATAAGGGGCAAGCTGTCGATCCTGCAAGAT
ATTGCAAACGTTAG

Upstream 100 bases:

>100_bases
AGTGATTTAGCGCCGACTATGTTAACCTTGATGGGACAAGACGTACCTGAAGAGATGACAGGTCGCTCAATTATAAAACT
CAAAGAGTAATAGTTAACAA

Downstream 100 bases:

>100_bases
ACCATATAACCCCTTAAGATATAAGGGGTTAATATGTCACTGTACATACGCTATTTTTGTTGCCTCGCGGCGGGGCTCGC
TCTGGGTTTGTCTATCACCC

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MNIRFFIKASIIAGFLSLPLTVNATDLERRQSELKSIQAQINKQQSEVKNTSKQRERLVSLLKADEKAIAQAARKVNTTK
QDLAKTDKKIAELSTKQAQLEKLKTAQQKSLSNQLASAYLAGNHDYSKMLLNQQSPASIERLLAYYEYLNNARIDSIEQL
QTTLKELDQIQADQQEQQSRLNKLVLDRQQQAKKLSQEQSQRQSTLTQLQRTLSSSGAKLEQLQIEEASLKRVVEQAVTA
MKNNPSYEGLSSRKKLNWPANGRIRSAFGSKRSGQVKWKGVIISADEGQNVSAIAGGKVIYADWLRGFGMVLVVDHGKGY
MSLYGHAQALLKNAGDSVSKGESIALVGRSGGQTEPGLYFEVRHKGQAVDPARYCKR

Sequences:

>Translated_377_residues
MNIRFFIKASIIAGFLSLPLTVNATDLERRQSELKSIQAQINKQQSEVKNTSKQRERLVSLLKADEKAIAQAARKVNTTK
QDLAKTDKKIAELSTKQAQLEKLKTAQQKSLSNQLASAYLAGNHDYSKMLLNQQSPASIERLLAYYEYLNNARIDSIEQL
QTTLKELDQIQADQQEQQSRLNKLVLDRQQQAKKLSQEQSQRQSTLTQLQRTLSSSGAKLEQLQIEEASLKRVVEQAVTA
MKNNPSYEGLSSRKKLNWPANGRIRSAFGSKRSGQVKWKGVIISADEGQNVSAIAGGKVIYADWLRGFGMVLVVDHGKGY
MSLYGHAQALLKNAGDSVSKGESIALVGRSGGQTEPGLYFEVRHKGQAVDPARYCKR
>Mature_377_residues
MNIRFFIKASIIAGFLSLPLTVNATDLERRQSELKSIQAQINKQQSEVKNTSKQRERLVSLLKADEKAIAQAARKVNTTK
QDLAKTDKKIAELSTKQAQLEKLKTAQQKSLSNQLASAYLAGNHDYSKMLLNQQSPASIERLLAYYEYLNNARIDSIEQL
QTTLKELDQIQADQQEQQSRLNKLVLDRQQQAKKLSQEQSQRQSTLTQLQRTLSSSGAKLEQLQIEEASLKRVVEQAVTA
MKNNPSYEGLSSRKKLNWPANGRIRSAFGSKRSGQVKWKGVIISADEGQNVSAIAGGKVIYADWLRGFGMVLVVDHGKGY
MSLYGHAQALLKNAGDSVSKGESIALVGRSGGQTEPGLYFEVRHKGQAVDPARYCKR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=412, Percent_Identity=35.6796116504854, Blast_Score=239, Evalue=2e-64,
Organism=Escherichia coli, GI1789099, Length=118, Percent_Identity=37.2881355932203, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87082174, Length=118, Percent_Identity=33.8983050847458, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87081989, Length=114, Percent_Identity=32.4561403508772, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 41964; Mature: 41964

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRFFIKASIIAGFLSLPLTVNATDLERRQSELKSIQAQINKQQSEVKNTSKQRERLVS
CCEEEEEHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKADEKAIAQAARKVNTTKQDLAKTDKKIAELSTKQAQLEKLKTAQQKSLSNQLASAYL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGNHDYSKMLLNQQSPASIERLLAYYEYLNNARIDSIEQLQTTLKELDQIQADQQEQQSR
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
LNKLVLDRQQQAKKLSQEQSQRQSTLTQLQRTLSSSGAKLEQLQIEEASLKRVVEQAVTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
MKNNPSYEGLSSRKKLNWPANGRIRSAFGSKRSGQVKWKGVIISADEGQNVSAIAGGKVI
HHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEEECCCCCCEEEECCCCEE
YADWLRGFGMVLVVDHGKGYMSLYGHAQALLKNAGDSVSKGESIALVGRSGGQTEPGLYF
HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEE
EVRHKGQAVDPARYCKR
EEECCCCCCCHHHHHCC
>Mature Secondary Structure
MNIRFFIKASIIAGFLSLPLTVNATDLERRQSELKSIQAQINKQQSEVKNTSKQRERLVS
CCEEEEEHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLKADEKAIAQAARKVNTTKQDLAKTDKKIAELSTKQAQLEKLKTAQQKSLSNQLASAYL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGNHDYSKMLLNQQSPASIERLLAYYEYLNNARIDSIEQLQTTLKELDQIQADQQEQQSR
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
LNKLVLDRQQQAKKLSQEQSQRQSTLTQLQRTLSSSGAKLEQLQIEEASLKRVVEQAVTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
MKNNPSYEGLSSRKKLNWPANGRIRSAFGSKRSGQVKWKGVIISADEGQNVSAIAGGKVI
HHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEEEECCCCCCEEEECCCCEE
YADWLRGFGMVLVVDHGKGYMSLYGHAQALLKNAGDSVSKGESIALVGRSGGQTEPGLYF
HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEE
EVRHKGQAVDPARYCKR
EEECCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]