| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is gpmI [H]
Identifier: 157964028
GI number: 157964028
Start: 5123913
End: 5125457
Strand: Direct
Name: gpmI [H]
Synonym: Spea_4217
Alternate gene names: 157964028
Gene position: 5123913-5125457 (Clockwise)
Preceding gene: 157964024
Following gene: 157964029
Centisome position: 99.02
GC content: 48.67
Gene sequence:
>1545_bases ATGACGACACGCAAACGCCCGCTGGCACTGCTGATCCTCGATGGCTGGGGTTACCGTGAAAACACACAAAAAAATGCTGT TTTTCATGCCAACACACCGGTTCTTGACCAGTTAAATGCCAAATATCCAAATAGTTTAATCTCAGGTTCTGGCATCGATG TTGGTTTACCTGACGGCCAAATGGGTAACTCTGAAGTCGGACACATCAACATTGGCTCTGGGCGCATCGTTTACCAAGAG CTAACTCGTATTAGCAAAGCTATCGATGATGGCGAGTTTGATACAAACCCTGCACTAACCAAGGCTATCGATGATGCAAT CGAGGTTAATGGTGCGGTCCACATCATGGGACTCTTATCGCCAGGTGGCGTTCACAGTCACCAAGATCATATCGAAGCCA TGTGCCGCCTTGCGGTAAAACGCGGCGCGAAAAAAGTCTACCTACACGCATTCTTAGATGGCCGCGATACACCGCCACGC AGCGCTAAACCAGGCTTGGCTCACTTTGAAGAACTATTCAAATCCTTAGGTACAGGTCAAGTCGCATCTGTGATTGGTCG CTACTACGCGATGGACCGCGACAACCGCTGGGATCGCGTATCACAAGCCTATGAACTCATCACTGAAGGCAAAAGCCTGC ACCAAAGTGCTACGGCAGTAGACGCAATTGAAGCCGCTTATACGCGTGATGAGAATGATGAATTTGTTGGCAGCACAGTT ATTCCAGATGCTCAGGGCAATATCGCTAAGCTTGTCGACAATGACGCACTGATTTTCATGAACTTCCGAGCCGATCGTGC TCGTCAAATTACCCGCAGCTTCGTCGATGCTGACTTTGATGGCTTCGAGCGAGCCGTTACACCGAAGATCAACTTCGTTA TGTTGACCGAATATGCTGCCAACATTAAGGCCGCAATAGCTTATCCATCGAGTGACTTAGTTAATACCTTAGGCGAGACG CTGCAAGACAGAGATCTGACTCAGCTACGTATCTCTGAAACTGAGAAGTATGCCCATGTCACTTTCTTCTTCAACGGTGG TAAAGAGGAGCCGTTCAAGGGTGAAGATCGCATTCTGATCCAGTCTCCAAAAGTCGCGACCTACGACCTGCAGCCAGAGA TGAGTTCTACCGAATTAACCGACAAGCTCGTTGCGGCCATCGAGTCAACCGAGTATGACGTCATCATCTGTAACTATCCT AACGGTGATATGGTTGGCCACACGGGCAATTTCGATGCGGCAGTTAAAGCCTGTGAAGCCGTCGATACCTGCATTGGTCG CGTTGTCGAAGCGCTAGAAAAAGTGGGGGGTGAGTGTTTAATTACTGCCGATCACGGTAATGCCGAGCAGATGACGGATG AGTCTACAGGTCAAGCTCACACCGCACACACCAGCGAATTAATACCGTTAATCTATGTCGGGCGTGATGCAGAGATAGAA AATGGCGGTCGTTTAAGTGATTTAGCGCCGACTATGTTAACCTTGATGGGACAAGACGTACCTGAAGAGATGACAGGTCG CTCAATTATAAAACTCAAAGAGTAA
Upstream 100 bases:
>100_bases ACGCCAATCTGGGTAAATGTCTTTATGCACGACCATAATTGGTAGTAATATTTAACCAATTCTGATTTCAATTTTATTTT TTAAACTTAAAGGTACTACC
Downstream 100 bases:
>100_bases TAGTTAACAATTGAACATTCGATTTTTTATCAAAGCCAGCATTATTGCTGGCTTTCTATCGCTTCCTTTAACGGTTAATG CGACCGATCTTGAGCGCCGC
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MTTRKRPLALLILDGWGYRENTQKNAVFHANTPVLDQLNAKYPNSLISGSGIDVGLPDGQMGNSEVGHINIGSGRIVYQE LTRISKAIDDGEFDTNPALTKAIDDAIEVNGAVHIMGLLSPGGVHSHQDHIEAMCRLAVKRGAKKVYLHAFLDGRDTPPR SAKPGLAHFEELFKSLGTGQVASVIGRYYAMDRDNRWDRVSQAYELITEGKSLHQSATAVDAIEAAYTRDENDEFVGSTV IPDAQGNIAKLVDNDALIFMNFRADRARQITRSFVDADFDGFERAVTPKINFVMLTEYAANIKAAIAYPSSDLVNTLGET LQDRDLTQLRISETEKYAHVTFFFNGGKEEPFKGEDRILIQSPKVATYDLQPEMSSTELTDKLVAAIESTEYDVIICNYP NGDMVGHTGNFDAAVKACEAVDTCIGRVVEALEKVGGECLITADHGNAEQMTDESTGQAHTAHTSELIPLIYVGRDAEIE NGGRLSDLAPTMLTLMGQDVPEEMTGRSIIKLKE
Sequences:
>Translated_514_residues MTTRKRPLALLILDGWGYRENTQKNAVFHANTPVLDQLNAKYPNSLISGSGIDVGLPDGQMGNSEVGHINIGSGRIVYQE LTRISKAIDDGEFDTNPALTKAIDDAIEVNGAVHIMGLLSPGGVHSHQDHIEAMCRLAVKRGAKKVYLHAFLDGRDTPPR SAKPGLAHFEELFKSLGTGQVASVIGRYYAMDRDNRWDRVSQAYELITEGKSLHQSATAVDAIEAAYTRDENDEFVGSTV IPDAQGNIAKLVDNDALIFMNFRADRARQITRSFVDADFDGFERAVTPKINFVMLTEYAANIKAAIAYPSSDLVNTLGET LQDRDLTQLRISETEKYAHVTFFFNGGKEEPFKGEDRILIQSPKVATYDLQPEMSSTELTDKLVAAIESTEYDVIICNYP NGDMVGHTGNFDAAVKACEAVDTCIGRVVEALEKVGGECLITADHGNAEQMTDESTGQAHTAHTSELIPLIYVGRDAEIE NGGRLSDLAPTMLTLMGQDVPEEMTGRSIIKLKE >Mature_513_residues TTRKRPLALLILDGWGYRENTQKNAVFHANTPVLDQLNAKYPNSLISGSGIDVGLPDGQMGNSEVGHINIGSGRIVYQEL TRISKAIDDGEFDTNPALTKAIDDAIEVNGAVHIMGLLSPGGVHSHQDHIEAMCRLAVKRGAKKVYLHAFLDGRDTPPRS AKPGLAHFEELFKSLGTGQVASVIGRYYAMDRDNRWDRVSQAYELITEGKSLHQSATAVDAIEAAYTRDENDEFVGSTVI PDAQGNIAKLVDNDALIFMNFRADRARQITRSFVDADFDGFERAVTPKINFVMLTEYAANIKAAIAYPSSDLVNTLGETL QDRDLTQLRISETEKYAHVTFFFNGGKEEPFKGEDRILIQSPKVATYDLQPEMSSTELTDKLVAAIESTEYDVIICNYPN GDMVGHTGNFDAAVKACEAVDTCIGRVVEALEKVGGECLITADHGNAEQMTDESTGQAHTAHTSELIPLIYVGRDAEIEN GGRLSDLAPTMLTLMGQDVPEEMTGRSIIKLKE
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=511, Percent_Identity=66.3405088062622, Blast_Score=706, Evalue=0.0, Organism=Caenorhabditis elegans, GI32564249, Length=512, Percent_Identity=43.75, Blast_Score=426, Evalue=1e-119, Organism=Caenorhabditis elegans, GI17507741, Length=512, Percent_Identity=43.75, Blast_Score=426, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 56231; Mature: 56100
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRKRPLALLILDGWGYRENTQKNAVFHANTPVLDQLNAKYPNSLISGSGIDVGLPDGQ CCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCEECCCCCC MGNSEVGHINIGSGRIVYQELTRISKAIDDGEFDTNPALTKAIDDAIEVNGAVHIMGLLS CCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECC PGGVHSHQDHIEAMCRLAVKRGAKKVYLHAFLDGRDTPPRSAKPGLAHFEELFKSLGTGQ CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCH VASVIGRYYAMDRDNRWDRVSQAYELITEGKSLHQSATAVDAIEAAYTRDENDEFVGSTV HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE IPDAQGNIAKLVDNDALIFMNFRADRARQITRSFVDADFDGFERAVTPKINFVMLTEYAA CCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEEECCC NIKAAIAYPSSDLVNTLGETLQDRDLTQLRISETEKYAHVTFFFNGGKEEPFKGEDRILI CCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEE QSPKVATYDLQPEMSSTELTDKLVAAIESTEYDVIICNYPNGDMVGHTGNFDAAVKACEA ECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH VDTCIGRVVEALEKVGGECLITADHGNAEQMTDESTGQAHTAHTSELIPLIYVGRDAEIE HHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCC NGGRLSDLAPTMLTLMGQDVPEEMTGRSIIKLKE CCCCCHHHHHHHHHHHCCCCCHHHCCCCEEEECC >Mature Secondary Structure TTRKRPLALLILDGWGYRENTQKNAVFHANTPVLDQLNAKYPNSLISGSGIDVGLPDGQ CCCCCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCEECCCCCC MGNSEVGHINIGSGRIVYQELTRISKAIDDGEFDTNPALTKAIDDAIEVNGAVHIMGLLS CCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECC PGGVHSHQDHIEAMCRLAVKRGAKKVYLHAFLDGRDTPPRSAKPGLAHFEELFKSLGTGQ CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCH VASVIGRYYAMDRDNRWDRVSQAYELITEGKSLHQSATAVDAIEAAYTRDENDEFVGSTV HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE IPDAQGNIAKLVDNDALIFMNFRADRARQITRSFVDADFDGFERAVTPKINFVMLTEYAA CCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEEEECCC NIKAAIAYPSSDLVNTLGETLQDRDLTQLRISETEKYAHVTFFFNGGKEEPFKGEDRILI CCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEE QSPKVATYDLQPEMSSTELTDKLVAAIESTEYDVIICNYPNGDMVGHTGNFDAAVKACEA ECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH VDTCIGRVVEALEKVGGECLITADHGNAEQMTDESTGQAHTAHTSELIPLIYVGRDAEIE HHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCC NGGRLSDLAPTMLTLMGQDVPEEMTGRSIIKLKE CCCCCHHHHHHHHHHHCCCCCHHHCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA