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The map label for this gene is 157964015

Identifier: 157964015

GI number: 157964015

Start: 5100691

End: 5101287

Strand: Reverse

Name: 157964015

Synonym: Spea_4204

Alternate gene names: NA

Gene position: 5101287-5100691 (Counterclockwise)

Preceding gene: 157964016

Following gene: 157964014

Centisome position: 98.58

GC content: 47.91

Gene sequence:

>597_bases
ATGCGCATCTTACTGACTCAATTAATTTTCGCTAGCCTAGTGTTACTACAGGGCTGCGCCGAAACCGCCGAGCCATTTGC
TGTGGAACCACAAACACGAGACTTACTCGACACCGATATCGATGGTGTGATTAATGCTCGTGATAAATGTGCAGGCACAG
CTAAAGGGTCGGTCATCAATAATGATGGCTGTCCAACTAGCACTGTAAGCGTGAAGGAAGACTTTAGAGTGATTATGTTT
GGCTTCGATAAAGATACTTTAGCACCCGAGCAGGCTGATAAATGGCGAGGCATTATTGCGGGGTTAGTGCAGAAGCAGTC
ACCGTCACTCTATCTGGTTGGTGATACCAGCGTCGAAGGTAGTGAAGATTACAACCACGCCTTAGCCAAGCGACGCGTGG
ACTACATCACTCAACTTGCAGTAGATCAGGGCTTTCCCGCCAGTGGGATTAAAGAGGAAGTTTACTTTAAGCAAAACCAT
ATTCCTCAATCGGTATCGGGCCGCGAATATCGCCTCGTTGCCGTCGCAACTTGGGAGGAGTCGGGAACTGAGATGATGTG
GAATATCTATACTTCTGAGCGAGCTAAACGGAATTAG

Upstream 100 bases:

>100_bases
AACTACAATATTGCTGCTTATCGTCTTATTAACGCAACCGGCTATTTAATGGAGTCATTCCGTGTCGATACCCCAGAAGC
TTGGACGGAGGAGAAGTAAT

Downstream 100 bases:

>100_bases
CGCAAGCATAGGCCGTCGTATTGAGAAAAGAGCACTTAGGTGCTCTTTTTGTTTTCAGCCCTAAACCACCTACTTCAGTA
GGTGGTTATTATCAATTAGG

Product: outer membrane protein

Products: NA

Alternate protein names: OmpA/MotB Domain-Containing Protein; OmpA Family Protein; Ompa/Motb Domain Protein; Outer Membrane Porin F; OmpA/MotB

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRILLTQLIFASLVLLQGCAETAEPFAVEPQTRDLLDTDIDGVINARDKCAGTAKGSVINNDGCPTSTVSVKEDFRVIMF
GFDKDTLAPEQADKWRGIIAGLVQKQSPSLYLVGDTSVEGSEDYNHALAKRRVDYITQLAVDQGFPASGIKEEVYFKQNH
IPQSVSGREYRLVAVATWEESGTEMMWNIYTSERAKRN

Sequences:

>Translated_198_residues
MRILLTQLIFASLVLLQGCAETAEPFAVEPQTRDLLDTDIDGVINARDKCAGTAKGSVINNDGCPTSTVSVKEDFRVIMF
GFDKDTLAPEQADKWRGIIAGLVQKQSPSLYLVGDTSVEGSEDYNHALAKRRVDYITQLAVDQGFPASGIKEEVYFKQNH
IPQSVSGREYRLVAVATWEESGTEMMWNIYTSERAKRN
>Mature_198_residues
MRILLTQLIFASLVLLQGCAETAEPFAVEPQTRDLLDTDIDGVINARDKCAGTAKGSVINNDGCPTSTVSVKEDFRVIMF
GFDKDTLAPEQADKWRGIIAGLVQKQSPSLYLVGDTSVEGSEDYNHALAKRRVDYITQLAVDQGFPASGIKEEVYFKQNH
IPQSVSGREYRLVAVATWEESGTEMMWNIYTSERAKRN

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21968; Mature: 21968

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLTQLIFASLVLLQGCAETAEPFAVEPQTRDLLDTDIDGVINARDKCAGTAKGSVIN
CHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHCCCCHHCCCCHHHCCCCCCCEEC
NDGCPTSTVSVKEDFRVIMFGFDKDTLAPEQADKWRGIIAGLVQKQSPSLYLVGDTSVEG
CCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
SEDYNHALAKRRVDYITQLAVDQGFPASGIKEEVYFKQNHIPQSVSGREYRLVAVATWEE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEEEECC
SGTEMMWNIYTSERAKRN
CCCEEEEEEECCHHCCCC
>Mature Secondary Structure
MRILLTQLIFASLVLLQGCAETAEPFAVEPQTRDLLDTDIDGVINARDKCAGTAKGSVIN
CHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHCCCCHHCCCCHHHCCCCCCCEEC
NDGCPTSTVSVKEDFRVIMFGFDKDTLAPEQADKWRGIIAGLVQKQSPSLYLVGDTSVEG
CCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
SEDYNHALAKRRVDYITQLAVDQGFPASGIKEEVYFKQNHIPQSVSGREYRLVAVATWEE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEEEEECC
SGTEMMWNIYTSERAKRN
CCCEEEEEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA