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The map label for this gene is bepC [H]

Identifier: 157964016

GI number: 157964016

Start: 5101289

End: 5102584

Strand: Reverse

Name: bepC [H]

Synonym: Spea_4205

Alternate gene names: 157964016

Gene position: 5102584-5101289 (Counterclockwise)

Preceding gene: 157964017

Following gene: 157964015

Centisome position: 98.61

GC content: 49.15

Gene sequence:

>1296_bases
ATGCGACGACTGATACTTATACCAATACTGGCATTATCGGCTCAGGCGCAGGCTCTCACACTTGAAGAGTCTGTGGCGGA
AGCGATTAATCACCACCCAACAATTTGGCAGAAATATGCCAGTTTCGAAGCTGCGGTAAGATATAAACGTGCGGCAGTAG
GGGATTACCTGCCACAGGTGAAACTTTACGGTGGCGTGGGCTATGAAAGTGTCCGCTATAACAGCGGACAGCGTATCGAT
ACCGAGCTGGACCGTACCGAAATAGGTGTACGTGTATCACAGCTACTCTTCGATGGTTTCCGCACGACCTCTGAGATTGA
TAGGCTAGATTTTGAGAAAGAGGCCGAGCGTTTAGGTCTACTTTCCGATGCAGAGAACTTGAGTTTAGAAGTCAGCCGAG
TCTACCTTGAATTGTCGATGGCCAATAAAATCGTCGAGCTGTCTGAGCGTAATATAAAAGAGCACCAAGAGGTGCTTAAA
AATATTGAGTCACGTAGAGATAAAGGCCTGAGTAGCGACTCCGATGTTGCGCAGGTGCGGGCGCGTTTGGCAACCAGTCA
GTCGGGTTATCTTTCTGCGCGTAATAACCAGATGGATAAACAGGCGCGTTACTATGACCTTGTGGGGCAACTTCCGAAAG
ACCTCCATGATCCGCAGCCAGATTTTGAGTTTGTGCCGACTAACTTGCCCGATGCTATTCGCCTCGCGTTGGAAAACCAC
CCAGAGATCGACGCTGCAATTCTCGATACTCAGGCGGCTAACGCCCAATATGAACGCGAGAAAAGTGACTTTTGGCCGAC
TTTATCTTTAGAGCTACAAGCAAATAAAAACGACAACATTGGCGGCATCGAAGGCCCAGATGAAGATGCCAGAGCTATGT
TGATGCTCAGCTATGATCTATTCAGTGGTGGCTCGACGACTGACCGCACTGAAGCCGCCTCTTGGCGTTATCAGCAATCA
CTCGCGATTAGTAAGAATACCCAGAAGCAGGTTGAAGAGGGCACGCGCCTCGCGTGGAATGCCTATGAATTTATTGGTCA
GCAGCGAGGGTTCTATCGCGAGAATGTCGATCAAGCGGTTAAAGCTGAGCAAGGTTATGCTAAACAGTTTGAGTTGGGTC
GCCGCTCACTGCTCGATGTACTCGATGCCAAGGTCGAGGTGTTCTTAGCGCGCAAGCACTACATCACAGCGCACTATAAC
TACAATATTGCTGCTTATCGTCTTATTAACGCAACCGGCTATTTAATGGAGTCATTCCGTGTCGATACCCCAGAAGCTTG
GACGGAGGAGAAGTAA

Upstream 100 bases:

>100_bases
CGACATATTAACCGGTGAGAAAACCGTTTTAAATTATTGGCTAAAGCCTCTATTACGCGCTAAAGCAAATGCACTTCGCG
AACCATAAGGTAAGGACACG

Downstream 100 bases:

>100_bases
TATGCGCATCTTACTGACTCAATTAATTTTCGCTAGCCTAGTGTTACTACAGGGCTGCGCCGAAACCGCCGAGCCATTTG
CTGTGGAACCACAAACACGA

Product: TolC family type I secretion outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MRRLILIPILALSAQAQALTLEESVAEAINHHPTIWQKYASFEAAVRYKRAAVGDYLPQVKLYGGVGYESVRYNSGQRID
TELDRTEIGVRVSQLLFDGFRTTSEIDRLDFEKEAERLGLLSDAENLSLEVSRVYLELSMANKIVELSERNIKEHQEVLK
NIESRRDKGLSSDSDVAQVRARLATSQSGYLSARNNQMDKQARYYDLVGQLPKDLHDPQPDFEFVPTNLPDAIRLALENH
PEIDAAILDTQAANAQYEREKSDFWPTLSLELQANKNDNIGGIEGPDEDARAMLMLSYDLFSGGSTTDRTEAASWRYQQS
LAISKNTQKQVEEGTRLAWNAYEFIGQQRGFYRENVDQAVKAEQGYAKQFELGRRSLLDVLDAKVEVFLARKHYITAHYN
YNIAAYRLINATGYLMESFRVDTPEAWTEEK

Sequences:

>Translated_431_residues
MRRLILIPILALSAQAQALTLEESVAEAINHHPTIWQKYASFEAAVRYKRAAVGDYLPQVKLYGGVGYESVRYNSGQRID
TELDRTEIGVRVSQLLFDGFRTTSEIDRLDFEKEAERLGLLSDAENLSLEVSRVYLELSMANKIVELSERNIKEHQEVLK
NIESRRDKGLSSDSDVAQVRARLATSQSGYLSARNNQMDKQARYYDLVGQLPKDLHDPQPDFEFVPTNLPDAIRLALENH
PEIDAAILDTQAANAQYEREKSDFWPTLSLELQANKNDNIGGIEGPDEDARAMLMLSYDLFSGGSTTDRTEAASWRYQQS
LAISKNTQKQVEEGTRLAWNAYEFIGQQRGFYRENVDQAVKAEQGYAKQFELGRRSLLDVLDAKVEVFLARKHYITAHYN
YNIAAYRLINATGYLMESFRVDTPEAWTEEK
>Mature_431_residues
MRRLILIPILALSAQAQALTLEESVAEAINHHPTIWQKYASFEAAVRYKRAAVGDYLPQVKLYGGVGYESVRYNSGQRID
TELDRTEIGVRVSQLLFDGFRTTSEIDRLDFEKEAERLGLLSDAENLSLEVSRVYLELSMANKIVELSERNIKEHQEVLK
NIESRRDKGLSSDSDVAQVRARLATSQSGYLSARNNQMDKQARYYDLVGQLPKDLHDPQPDFEFVPTNLPDAIRLALENH
PEIDAAILDTQAANAQYEREKSDFWPTLSLELQANKNDNIGGIEGPDEDARAMLMLSYDLFSGGSTTDRTEAASWRYQQS
LAISKNTQKQVEEGTRLAWNAYEFIGQQRGFYRENVDQAVKAEQGYAKQFELGRRSLLDVLDAKVEVFLARKHYITAHYN
YNIAAYRLINATGYLMESFRVDTPEAWTEEK

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 49069; Mature: 49069

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLILIPILALSAQAQALTLEESVAEAINHHPTIWQKYASFEAAVRYKRAAVGDYLPQV
CCCEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCE
KLYGGVGYESVRYNSGQRIDTELDRTEIGVRVSQLLFDGFRTTSEIDRLDFEKEAERLGL
EEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCC
LSDAENLSLEVSRVYLELSMANKIVELSERNIKEHQEVLKNIESRRDKGLSSDSDVAQVR
CCCCCCCEEEEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ARLATSQSGYLSARNNQMDKQARYYDLVGQLPKDLHDPQPDFEFVPTNLPDAIRLALENH
HHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCC
PEIDAAILDTQAANAQYEREKSDFWPTLSLELQANKNDNIGGIEGPDEDARAMLMLSYDL
CCCCCEEECCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHEEEEEEEEC
FSGGSTTDRTEAASWRYQQSLAISKNTQKQVEEGTRLAWNAYEFIGQQRGFYRENVDQAV
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCEEHHHHHHHHHCCCCHHHHHHHHH
KAEQGYAKQFELGRRSLLDVLDAKVEVFLARKHYITAHYNYNIAAYRLINATGYLMESFR
HHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCEEEEEEEHHHHHHHHHHC
VDTPEAWTEEK
CCCCCCCCCCC
>Mature Secondary Structure
MRRLILIPILALSAQAQALTLEESVAEAINHHPTIWQKYASFEAAVRYKRAAVGDYLPQV
CCCEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCE
KLYGGVGYESVRYNSGQRIDTELDRTEIGVRVSQLLFDGFRTTSEIDRLDFEKEAERLGL
EEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCC
LSDAENLSLEVSRVYLELSMANKIVELSERNIKEHQEVLKNIESRRDKGLSSDSDVAQVR
CCCCCCCEEEEEHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ARLATSQSGYLSARNNQMDKQARYYDLVGQLPKDLHDPQPDFEFVPTNLPDAIRLALENH
HHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCC
PEIDAAILDTQAANAQYEREKSDFWPTLSLELQANKNDNIGGIEGPDEDARAMLMLSYDL
CCCCCEEECCCCCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHEEEEEEEEC
FSGGSTTDRTEAASWRYQQSLAISKNTQKQVEEGTRLAWNAYEFIGQQRGFYRENVDQAV
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCEEHHHHHHHHHCCCCHHHHHHHHH
KAEQGYAKQFELGRRSLLDVLDAKVEVFLARKHYITAHYNYNIAAYRLINATGYLMESFR
HHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCEEEEEEEHHHHHHHHHHC
VDTPEAWTEEK
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]