| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963992
Identifier: 157963992
GI number: 157963992
Start: 5076788
End: 5077741
Strand: Reverse
Name: 157963992
Synonym: Spea_4181
Alternate gene names: NA
Gene position: 5077741-5076788 (Counterclockwise)
Preceding gene: 157963993
Following gene: 157963990
Centisome position: 98.13
GC content: 43.71
Gene sequence:
>954_bases ATGACGGCAACAAAAATAATAACAATTCCCGCAGCTTTGCAAGTCATAATATCTTCGGTTAAGGGCTTCTACCAAAAGAG AATTTCAGGCTTAGGGCAAAAGCTGTCAGTACTGACTTTTGCGCAATACCTATATGTGTTAGCGGGATTGATTGCAATTT TTGCGGACTCATTTAGTTGGGTTGTAGTGTTAACTGTGTTGGCGTTAACGATAGAGCTGTTACCTATTTTTGAGCGAATT TGGCATAGCTTAGTTGGTAAAGCTGTGCTGTTGCTGTTTTATGCCTTAGTGGCTAACTTTGCGTTGGGTTGGGCTGCTGG GGTCGTCAATGATGTGATTGGGGTGTCTGCCACGAATGTTGCCTATACTCATAATTTGGCGATTTTACTGTATGTCCCTG TGTGGTTTGTGTTTATCACCGCCCTGGTTATTCTCGCCGCGCAGTTGCTGGTGCCTTTCTATTTAATACTTGCTTTAATG CTCGCGCCATTAGGCATTAAACTGCCTAAGTTGACTCAAAATGTTCATTTTCAAAAACTCACTTGGCTATTGCGTTTGAT GTTGGCAACTGGCTTGTTCGCTCACCTTGTTTTATATGTATTGCCAGAGCTTGGAGTCGAACAGTCACAACAAACTATCA CTAGCGATATCACTGCTGGCTTGGTACCGACGACGACCACTATAAGCGCCGAGGATGCAGAGCTAAAGGGGATGACAGAT GAGTATTTGCAAACGCGGTATGAGTACCAAGCATTTGTGCGGCAGATGATTGCGCTTTTTGCATTTGAGTTTGAAGCTGA CAGTAAGTCTCGCTGCCAGAAGGATCCCGATTCAAGAGTGGTTGAATTAAACGACTATGAACTGATCGAAATATATCGCG ATAAGACACTGAACGATGGTTTTCGTTTCGAGGTTAAAAAGTGTATCTCGCCCGCTTTTCCAAGCGACAGTTGA
Upstream 100 bases:
>100_bases GCGTTTTTACTTATAGCAATCGGAAATGTTGGTAAATTGTTAGCAAACGTTTATGGTGGTCGCTTCTTGTGCGATTAATA ATGAGTGAGGCCAGTTTTTT
Downstream 100 bases:
>100_bases CAGCAAAAGTAACAAAAGAGCCTTTAAGGCCCTTTTGTTACTTAGCATTAACTTAATCTATCTTTAGCTCGTCAAAGCTA GCAATGGTTTTAAAATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTATKIITIPAALQVIISSVKGFYQKRISGLGQKLSVLTFAQYLYVLAGLIAIFADSFSWVVVLTVLALTIELLPIFERI WHSLVGKAVLLLFYALVANFALGWAAGVVNDVIGVSATNVAYTHNLAILLYVPVWFVFITALVILAAQLLVPFYLILALM LAPLGIKLPKLTQNVHFQKLTWLLRLMLATGLFAHLVLYVLPELGVEQSQQTITSDITAGLVPTTTTISAEDAELKGMTD EYLQTRYEYQAFVRQMIALFAFEFEADSKSRCQKDPDSRVVELNDYELIEIYRDKTLNDGFRFEVKKCISPAFPSDS
Sequences:
>Translated_317_residues MTATKIITIPAALQVIISSVKGFYQKRISGLGQKLSVLTFAQYLYVLAGLIAIFADSFSWVVVLTVLALTIELLPIFERI WHSLVGKAVLLLFYALVANFALGWAAGVVNDVIGVSATNVAYTHNLAILLYVPVWFVFITALVILAAQLLVPFYLILALM LAPLGIKLPKLTQNVHFQKLTWLLRLMLATGLFAHLVLYVLPELGVEQSQQTITSDITAGLVPTTTTISAEDAELKGMTD EYLQTRYEYQAFVRQMIALFAFEFEADSKSRCQKDPDSRVVELNDYELIEIYRDKTLNDGFRFEVKKCISPAFPSDS >Mature_316_residues TATKIITIPAALQVIISSVKGFYQKRISGLGQKLSVLTFAQYLYVLAGLIAIFADSFSWVVVLTVLALTIELLPIFERIW HSLVGKAVLLLFYALVANFALGWAAGVVNDVIGVSATNVAYTHNLAILLYVPVWFVFITALVILAAQLLVPFYLILALML APLGIKLPKLTQNVHFQKLTWLLRLMLATGLFAHLVLYVLPELGVEQSQQTITSDITAGLVPTTTTISAEDAELKGMTDE YLQTRYEYQAFVRQMIALFAFEFEADSKSRCQKDPDSRVVELNDYELIEIYRDKTLNDGFRFEVKKCISPAFPSDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35340; Mature: 35209
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATKIITIPAALQVIISSVKGFYQKRISGLGQKLSVLTFAQYLYVLAGLIAIFADSFSW CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VVVLTVLALTIELLPIFERIWHSLVGKAVLLLFYALVANFALGWAAGVVNDVIGVSATNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AYTHNLAILLYVPVWFVFITALVILAAQLLVPFYLILALMLAPLGIKLPKLTQNVHFQKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TWLLRLMLATGLFAHLVLYVLPELGVEQSQQTITSDITAGLVPTTTTISAEDAELKGMTD HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHCCCCH EYLQTRYEYQAFVRQMIALFAFEFEADSKSRCQKDPDSRVVELNDYELIEIYRDKTLNDG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCC FRFEVKKCISPAFPSDS HHHHHHHHCCCCCCCCC >Mature Secondary Structure TATKIITIPAALQVIISSVKGFYQKRISGLGQKLSVLTFAQYLYVLAGLIAIFADSFSW CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VVVLTVLALTIELLPIFERIWHSLVGKAVLLLFYALVANFALGWAAGVVNDVIGVSATNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AYTHNLAILLYVPVWFVFITALVILAAQLLVPFYLILALMLAPLGIKLPKLTQNVHFQKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TWLLRLMLATGLFAHLVLYVLPELGVEQSQQTITSDITAGLVPTTTTISAEDAELKGMTD HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCCHHCCCCH EYLQTRYEYQAFVRQMIALFAFEFEADSKSRCQKDPDSRVVELNDYELIEIYRDKTLNDG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCC FRFEVKKCISPAFPSDS HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA