| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963993
Identifier: 157963993
GI number: 157963993
Start: 5077868
End: 5078629
Strand: Reverse
Name: 157963993
Synonym: Spea_4182
Alternate gene names: NA
Gene position: 5078629-5077868 (Counterclockwise)
Preceding gene: 157963996
Following gene: 157963992
Centisome position: 98.15
GC content: 45.01
Gene sequence:
>762_bases ATGCACAGAATGGTAAAGCTGCTAATCGCAGGCTTGATGTTATGCATTGGGCAAACAGCTCAAGCCGCAATAATAAGTCA GTTTATTGAAGCAGAAACACGCCAAGAGCTTCGGGCATATCGATTAATTAAAAGCATTGAGCCACAGTTGCAGCAACTAT TTCTGGCTCTGCCTATGCAGCAAGATTTAACCTTGGTTTATGGCGCGCAAGACGGCCCCTTGTTTGCCCCTGAGTTAATG CAAATTCAAATTCCTTATCACTTCGTCACTGAGGTGCTTAGTCGCTTTACTAAAGATGAATATCAAAAAACTGGCGTAAC ACCGAAAACCGCAACTCAAGATGCGATTTTACATACCCTAGGGCATGAGTATGGCCATGCTTATATCTATGCCAATGAAG TGATAGTGCTGGGCCGTGAAGAGGATGCTGTCGACACCTTAGCCACATTGTTATTGATAAACGCGTTCGAAGACGGCGCC GAAATCGCGCTAAGTGCCGCAGATCTGTTTGCCCTTGAAGATGAAGACATTGATGAACTGGTTGAAGATGACTTTAGTGA TGAACATAGCCTAGACGCCCAGCGTTACCACGCAACTGTGTGCTTAATTTATGGCAGCGATCCTGACAAATATGCAAGTC TGCTAGCAGGCTCTGAACAAGACGCAGAACAAGCCACAGAAAGAGGGGCGATGTGTGAACAGGAGTACGCTCGTCAAAAT GATAATTGGGAGAGGTTAAAAAGCCGCTATTTAGCAAAATAA
Upstream 100 bases:
>100_bases TAATTGATTACTGTGGTTGCTTAAACATGTATTTAAACGGCTGTTTAACTTTTAGCCAGCATAACAGTATGTTTATCTAG CAACAAGGAGGGGGCGAAAT
Downstream 100 bases:
>100_bases TGCACTTGAAAGTTGGCAAATACTAAGCGTTTTTACTTATAGCAATCGGAAATGTTGGTAAATTGTTAGCAAACGTTTAT GGTGGTCGCTTCTTGTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MHRMVKLLIAGLMLCIGQTAQAAIISQFIEAETRQELRAYRLIKSIEPQLQQLFLALPMQQDLTLVYGAQDGPLFAPELM QIQIPYHFVTEVLSRFTKDEYQKTGVTPKTATQDAILHTLGHEYGHAYIYANEVIVLGREEDAVDTLATLLLINAFEDGA EIALSAADLFALEDEDIDELVEDDFSDEHSLDAQRYHATVCLIYGSDPDKYASLLAGSEQDAEQATERGAMCEQEYARQN DNWERLKSRYLAK
Sequences:
>Translated_253_residues MHRMVKLLIAGLMLCIGQTAQAAIISQFIEAETRQELRAYRLIKSIEPQLQQLFLALPMQQDLTLVYGAQDGPLFAPELM QIQIPYHFVTEVLSRFTKDEYQKTGVTPKTATQDAILHTLGHEYGHAYIYANEVIVLGREEDAVDTLATLLLINAFEDGA EIALSAADLFALEDEDIDELVEDDFSDEHSLDAQRYHATVCLIYGSDPDKYASLLAGSEQDAEQATERGAMCEQEYARQN DNWERLKSRYLAK >Mature_253_residues MHRMVKLLIAGLMLCIGQTAQAAIISQFIEAETRQELRAYRLIKSIEPQLQQLFLALPMQQDLTLVYGAQDGPLFAPELM QIQIPYHFVTEVLSRFTKDEYQKTGVTPKTATQDAILHTLGHEYGHAYIYANEVIVLGREEDAVDTLATLLLINAFEDGA EIALSAADLFALEDEDIDELVEDDFSDEHSLDAQRYHATVCLIYGSDPDKYASLLAGSEQDAEQATERGAMCEQEYARQN DNWERLKSRYLAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28522; Mature: 28522
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRMVKLLIAGLMLCIGQTAQAAIISQFIEAETRQELRAYRLIKSIEPQLQQLFLALPMQ CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QDLTLVYGAQDGPLFAPELMQIQIPYHFVTEVLSRFTKDEYQKTGVTPKTATQDAILHTL CCCEEEEECCCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH GHEYGHAYIYANEVIVLGREEDAVDTLATLLLINAFEDGAEIALSAADLFALEDEDIDEL HHHHCCEEEEECEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH VEDDFSDEHSLDAQRYHATVCLIYGSDPDKYASLLAGSEQDAEQATERGAMCEQEYARQN HHCCCCCCCCCCHHHEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCC DNWERLKSRYLAK CCHHHHHHHHCCC >Mature Secondary Structure MHRMVKLLIAGLMLCIGQTAQAAIISQFIEAETRQELRAYRLIKSIEPQLQQLFLALPMQ CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QDLTLVYGAQDGPLFAPELMQIQIPYHFVTEVLSRFTKDEYQKTGVTPKTATQDAILHTL CCCEEEEECCCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH GHEYGHAYIYANEVIVLGREEDAVDTLATLLLINAFEDGAEIALSAADLFALEDEDIDEL HHHHCCEEEEECEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHH VEDDFSDEHSLDAQRYHATVCLIYGSDPDKYASLLAGSEQDAEQATERGAMCEQEYARQN HHCCCCCCCCCCHHHEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCC DNWERLKSRYLAK CCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA