| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is mltC [H]
Identifier: 157963989
GI number: 157963989
Start: 5072934
End: 5073983
Strand: Direct
Name: mltC [H]
Synonym: Spea_4178
Alternate gene names: 157963989
Gene position: 5072934-5073983 (Clockwise)
Preceding gene: 157963988
Following gene: 157963991
Centisome position: 98.04
GC content: 47.71
Gene sequence:
>1050_bases ATGTCTAAATACCTATCCCAGCTACTGATACTCGTGCTCAGCGTAATCGCTATAACCATAGCGAATGTCGCTAACGCTAA CAGTAGTGAATTAGACCTGAGTGACTACGATGCCGATGTAGCGGCATTGCTACTGGAATATCAGGGGCAAGACTCCTACT CACGACCAATAGTGCCATCGGTGTTGGTGTATAAAGAAACCGAGCAGGCTTCAACTTATGTCGACTTTAAACGGGGTTTG ATCTTGGTGGAAACCCGCACTAAAGCGCAGCTTAAAGAGGCTGTGGTGCAAGTACTGTTAACCCAGATAGATCCTACTAT TATCGACGCGCAAACTGCAGAGGACTTTGGTTTAATCAGCAAAAAGAAGAAGCCATTCTTCTGGGGGCAAGTGCTCGACA GAGACGGCAAGGCGATTGAGTTTGAATGGCGCGCATCTCGCTATGCCGACGGCTTGGTCGCGAAAAGCAAACGAGTGAAC TCGCGCTTTCAAGTAGCCATTCACATGGTGAAAGAGCACACCACCATTGCCGGTAATAAGTATATAAACTACGCCCGTAG CGCTAGCCGTAAACACGGCATCAGTACCGATCTCATCATGGCGATTATCGAGACTGAGAGCTCGTTTAACCCACTGGCAC GCTCACGTTCTAATGCTCTAGGCTTGATGCAGATTAAGGCTAATACCGCCGGGCGAGATTATTTCAACTTAATCCAGGGC TATAAACACACGCCGTCATCGGCCTACCTTTATGATCCGGCCAAAAATATTGAGGTGGGCACTGGCTATCTAAAGATACT TTCAAGCCGCTACCTTAAAGGGATCACCCACCCTAAGAAGCGTGAGTATGCGGTGATCTCAAGTTATAACGGCGGCGCAG GAAACCTGTGGAAAAGCTTAGATCCGCGCGGTAATCGCACCAAGGCCTTAGCGCGAATTAATAAGATGACGGTCAGTGAG TTTTACTGGTTTTTAACCCACCGCCATAACCGCGAAGAAACCCGTAACTACTTAAAAAAAGTCAGTAGTCGACAGAAGAA ATACCTGTAA
Upstream 100 bases:
>100_bases ATCAAAACTTAGACACAAGCTAACAATCCAGCCATTTCACCTGAATAAATTCTGCTTACCCATGTATAATCAAGCCACAA AAACTCTAACCCACTGATAA
Downstream 100 bases:
>100_bases CGGCATCTAATACCAATTAGTATAAGAAGTTGATCTACTCAGAGCGATTTTGGCAAACTAATTCAAGGCGAATAACTGAA AGAATGGTTGCTCCCTTGTG
Product: lytic transglycosylase
Products: N-Acetylmuramic Acid Residues; N-Acetylglucosamine Residues [C]
Alternate protein names: Murein hydrolase C [H]
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MSKYLSQLLILVLSVIAITIANVANANSSELDLSDYDADVAALLLEYQGQDSYSRPIVPSVLVYKETEQASTYVDFKRGL ILVETRTKAQLKEAVVQVLLTQIDPTIIDAQTAEDFGLISKKKKPFFWGQVLDRDGKAIEFEWRASRYADGLVAKSKRVN SRFQVAIHMVKEHTTIAGNKYINYARSASRKHGISTDLIMAIIETESSFNPLARSRSNALGLMQIKANTAGRDYFNLIQG YKHTPSSAYLYDPAKNIEVGTGYLKILSSRYLKGITHPKKREYAVISSYNGGAGNLWKSLDPRGNRTKALARINKMTVSE FYWFLTHRHNREETRNYLKKVSSRQKKYL
Sequences:
>Translated_349_residues MSKYLSQLLILVLSVIAITIANVANANSSELDLSDYDADVAALLLEYQGQDSYSRPIVPSVLVYKETEQASTYVDFKRGL ILVETRTKAQLKEAVVQVLLTQIDPTIIDAQTAEDFGLISKKKKPFFWGQVLDRDGKAIEFEWRASRYADGLVAKSKRVN SRFQVAIHMVKEHTTIAGNKYINYARSASRKHGISTDLIMAIIETESSFNPLARSRSNALGLMQIKANTAGRDYFNLIQG YKHTPSSAYLYDPAKNIEVGTGYLKILSSRYLKGITHPKKREYAVISSYNGGAGNLWKSLDPRGNRTKALARINKMTVSE FYWFLTHRHNREETRNYLKKVSSRQKKYL >Mature_348_residues SKYLSQLLILVLSVIAITIANVANANSSELDLSDYDADVAALLLEYQGQDSYSRPIVPSVLVYKETEQASTYVDFKRGLI LVETRTKAQLKEAVVQVLLTQIDPTIIDAQTAEDFGLISKKKKPFFWGQVLDRDGKAIEFEWRASRYADGLVAKSKRVNS RFQVAIHMVKEHTTIAGNKYINYARSASRKHGISTDLIMAIIETESSFNPLARSRSNALGLMQIKANTAGRDYFNLIQGY KHTPSSAYLYDPAKNIEVGTGYLKILSSRYLKGITHPKKREYAVISSYNGGAGNLWKSLDPRGNRTKALARINKMTVSEF YWFLTHRHNREETRNYLKKVSSRQKKYL
Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transglycosylase slt family [H]
Homologues:
Organism=Escherichia coli, GI87082191, Length=296, Percent_Identity=42.5675675675676, Blast_Score=224, Evalue=9e-60, Organism=Escherichia coli, GI87081855, Length=162, Percent_Identity=37.037037037037, Blast_Score=112, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008258 - InterPro: IPR000189 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 39494; Mature: 39362
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS00922 TRANSGLYCOSYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYLSQLLILVLSVIAITIANVANANSSELDLSDYDADVAALLLEYQGQDSYSRPIVPS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC VLVYKETEQASTYVDFKRGLILVETRTKAQLKEAVVQVLLTQIDPTIIDAQTAEDFGLIS EEEEECCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCC KKKKPFFWGQVLDRDGKAIEFEWRASRYADGLVAKSKRVNSRFQVAIHMVKEHTTIAGNK CCCCCCCHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEECCCH YINYARSASRKHGISTDLIMAIIETESSFNPLARSRSNALGLMQIKANTAGRDYFNLIQG HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEECCCCCHHHHHHHHC YKHTPSSAYLYDPAKNIEVGTGYLKILSSRYLKGITHPKKREYAVISSYNGGAGNLWKSL CCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHCC DPRGNRTKALARINKMTVSEFYWFLTHRHNREETRNYLKKVSSRQKKYL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKYLSQLLILVLSVIAITIANVANANSSELDLSDYDADVAALLLEYQGQDSYSRPIVPS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC VLVYKETEQASTYVDFKRGLILVETRTKAQLKEAVVQVLLTQIDPTIIDAQTAEDFGLIS EEEEECCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCCCC KKKKPFFWGQVLDRDGKAIEFEWRASRYADGLVAKSKRVNSRFQVAIHMVKEHTTIAGNK CCCCCCCHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEECCCH YINYARSASRKHGISTDLIMAIIETESSFNPLARSRSNALGLMQIKANTAGRDYFNLIQG HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHCCCCCEEEEEEECCCCCHHHHHHHHC YKHTPSSAYLYDPAKNIEVGTGYLKILSSRYLKGITHPKKREYAVISSYNGGAGNLWKSL CCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHCC DPRGNRTKALARINKMTVSEFYWFLTHRHNREETRNYLKKVSSRQKKYL CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA