| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157963988
Identifier: 157963988
GI number: 157963988
Start: 5072226
End: 5072699
Strand: Direct
Name: 157963988
Synonym: Spea_4177
Alternate gene names: NA
Gene position: 5072226-5072699 (Clockwise)
Preceding gene: 157963982
Following gene: 157963989
Centisome position: 98.02
GC content: 41.77
Gene sequence:
>474_bases GTGCGTATTATATTTCTATTCATTTTTATACTTATCTCTACCGGCGTAAACGCGAGCTCTCCCCAACTAACAACTATTGG TCAGCATAACAAATCCATTATTTTGGAAACGGTATCTCCGGATCAAAAACACAAATTTCCAGCACTCTATATTTACGATA CCGAGCAACAACAATTTCTAAGCAAACAAGACGCTGCCGCCTATCTACAAACATTAGATGCAAGTCCTCTTTTGCCAGAG CTTGCTAGCCAATGGACTAAAAGCACCGAACAGTTCTCAACCAACAACAACGCGCTAGCCAAATCACTACCTATGTTGCA ATTAGATAGAACCTATTTAATCTTGTACGATAATCTGCCGGCTCCCATGCTAACGCAGCTCAAATCGATGGACCCTGAGT TAGAGCTCAAAGACGCCCTGCTTAGAAAGGTGTTAAGCCAATTAACCAGCGCTAGAAGCTATACCACCTATTAA
Upstream 100 bases:
>100_bases ACAAGCTCTTGACAGCATGCTCGCAACATCGCTAGTTTAGAAAATGGAGATAGGGATGTACTCCAAAATATTATTAAACC AAATAATTCAAGGATGAAAC
Downstream 100 bases:
>100_bases GCTCATATAAGGCTTATCACTTTCAAGCTCATCATTATTTATTGCTAGCGTTACTGGTAGTGTTAGTGATGTTGTTATTG ATAAGCCTTAAACGCATACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRIIFLFIFILISTGVNASSPQLTTIGQHNKSIILETVSPDQKHKFPALYIYDTEQQQFLSKQDAAAYLQTLDASPLLPE LASQWTKSTEQFSTNNNALAKSLPMLQLDRTYLILYDNLPAPMLTQLKSMDPELELKDALLRKVLSQLTSARSYTTY
Sequences:
>Translated_157_residues MRIIFLFIFILISTGVNASSPQLTTIGQHNKSIILETVSPDQKHKFPALYIYDTEQQQFLSKQDAAAYLQTLDASPLLPE LASQWTKSTEQFSTNNNALAKSLPMLQLDRTYLILYDNLPAPMLTQLKSMDPELELKDALLRKVLSQLTSARSYTTY >Mature_157_residues MRIIFLFIFILISTGVNASSPQLTTIGQHNKSIILETVSPDQKHKFPALYIYDTEQQQFLSKQDAAAYLQTLDASPLLPE LASQWTKSTEQFSTNNNALAKSLPMLQLDRTYLILYDNLPAPMLTQLKSMDPELELKDALLRKVLSQLTSARSYTTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17787; Mature: 17787
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIFLFIFILISTGVNASSPQLTTIGQHNKSIILETVSPDQKHKFPALYIYDTEQQQFL CHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEECHHHHHH SKQDAAAYLQTLDASPLLPELASQWTKSTEQFSTNNNALAKSLPMLQLDRTYLILYDNLP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCEEEEEECCCC APMLTQLKSMDPELELKDALLRKVLSQLTSARSYTTY CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRIIFLFIFILISTGVNASSPQLTTIGQHNKSIILETVSPDQKHKFPALYIYDTEQQQFL CHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCEEEEEECHHHHHH SKQDAAAYLQTLDASPLLPELASQWTKSTEQFSTNNNALAKSLPMLQLDRTYLILYDNLP HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCEEECCEEEEEECCCC APMLTQLKSMDPELELKDALLRKVLSQLTSARSYTTY CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA