| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963958
Identifier: 157963958
GI number: 157963958
Start: 5036980
End: 5037381
Strand: Reverse
Name: 157963958
Synonym: Spea_4147
Alternate gene names: NA
Gene position: 5037381-5036980 (Counterclockwise)
Preceding gene: 157963960
Following gene: 157963957
Centisome position: 97.35
GC content: 40.3
Gene sequence:
>402_bases ATGAATAAACTAATCGCAGTATTATTTTTAGTGCTATGCAGTAGTTTTAGCACGTTTGCTGCAGATAATAAGCCATTGGA AGAGTATGCTTATTATGGTTTCGAACCTGAGATTGTGACCAACTATATCTCTAATCGAAAGAAACTTGGCTATGTCAGAC TCAGTGTCGAGCTGATGGTTAAAAAGCCTGAACAGTTAGTGAGTCTGGAGCGACATGACCCGCTGTTAAGGGCGGCAATC GTCGAGATTTTAGGTAACCAGACCGAAGATAAGGTGAAGTCATTAACCGGAAAAGAAGAGATCCGTCGTCAGTGCTATGA AAAAGTGAATCAGCTTTTAGAGCAAGAAACAGGTGAGCCTTTGGTGGTGAACTTACTTTTCACCAAATATCTATACGATT AA
Upstream 100 bases:
>100_bases GCTGTCGACGCAGGTAGAGATTGTCTACTTAGAATGCTGACGTGACAATGTAAATTGGGAGTCTATCTCATCGATTATCG ACTAGGGAGTAAGTTTGAAG
Downstream 100 bases:
>100_bases TTTTCAATGCAAACGTCAGTAATGTTTGCTCTTTTACAGGTGCTAGCGCGTTAAAACATGAGTCATAAAACTAAATCTAC CACTCAAGAGCGCAAGGCTG
Product: flagellar basal body-associated protein FliL-like protein
Products: NA
Alternate protein names: Flagellar Basal Body-Associated Protein FliL; Flagellar Protein FliL; Flagellar Biosynthesis Protein FliL
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MNKLIAVLFLVLCSSFSTFAADNKPLEEYAYYGFEPEIVTNYISNRKKLGYVRLSVELMVKKPEQLVSLERHDPLLRAAI VEILGNQTEDKVKSLTGKEEIRRQCYEKVNQLLEQETGEPLVVNLLFTKYLYD
Sequences:
>Translated_133_residues MNKLIAVLFLVLCSSFSTFAADNKPLEEYAYYGFEPEIVTNYISNRKKLGYVRLSVELMVKKPEQLVSLERHDPLLRAAI VEILGNQTEDKVKSLTGKEEIRRQCYEKVNQLLEQETGEPLVVNLLFTKYLYD >Mature_133_residues MNKLIAVLFLVLCSSFSTFAADNKPLEEYAYYGFEPEIVTNYISNRKKLGYVRLSVELMVKKPEQLVSLERHDPLLRAAI VEILGNQTEDKVKSLTGKEEIRRQCYEKVNQLLEQETGEPLVVNLLFTKYLYD
Specific function: Unknown
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15394; Mature: 15394
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLIAVLFLVLCSSFSTFAADNKPLEEYAYYGFEPEIVTNYISNRKKLGYVRLSVELMV CHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHEEHHHHHH KKPEQLVSLERHDPLLRAAIVEILGNQTEDKVKSLTGKEEIRRQCYEKVNQLLEQETGEP HCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC LVVNLLFTKYLYD HHHHHHHHHHHCC >Mature Secondary Structure MNKLIAVLFLVLCSSFSTFAADNKPLEEYAYYGFEPEIVTNYISNRKKLGYVRLSVELMV CHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHEEHHHHHH KKPEQLVSLERHDPLLRAAIVEILGNQTEDKVKSLTGKEEIRRQCYEKVNQLLEQETGEP HCHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC LVVNLLFTKYLYD HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA