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The map label for this gene is ydiS [C]

Identifier: 157963932

GI number: 157963932

Start: 5004800

End: 5006449

Strand: Direct

Name: ydiS [C]

Synonym: Spea_4121

Alternate gene names: 157963932

Gene position: 5004800-5006449 (Clockwise)

Preceding gene: 157963915

Following gene: 157963954

Centisome position: 96.72

GC content: 50.06

Gene sequence:

>1650_bases
ATGGAACGCGAATCGATGGAATTCGATGTAGTAATCGTGGGTGCCGGCCCAGCGGGCTTGGCAACGGCATGTCGTTTAAT
GCAAATATCTAAAGACACTGGCCAAGAGCTCACCGTCTGCGTCGTCGAAAAAGGCTCTGAAGTCGGTGCACATATCTTGT
CTGGCGCAGTGTTTGAGCCCAAAGTGCTCGATGAGTTATTTGACGATTGGCGCGATAAGAATGCTCCCCTACTTACGGCC
GTGACCCATGATGAAATCCATATGCTCAGCTCGGCAACCGATGCCCGCGCCATGCCTAATGCCCTCGTGCCTAAAACCAT
GCACAACGAAGGTAACTACATCATCAGTGTCGGTAATCTCTGCCGCTGGCTAGCCGAACGCGCCGAAGAGCTTGCTGTCG
AAGTCTTTCCTGGTTTCCCTGCAAGCGAGTTACTGTTCAACGAAGACGGTAGCGTCAAAGGCATTCAAATTGGCGACATG
GGCGTAGGTGAAGATGGCCAGCCCAAAGATGGCTATGAGCCAGGCATGGAGCTACACGCTAAGTACACAGTATTTGGTGA
AGGTTGCCGCGGTCACTTAGGTAAACAGCTTATCGAGAAGTACCACCTCGACAATGGCAAAACCCCACAACACTATGGCT
TAGGTTTTAAAGAGATCTGGACAGTACCGAGCGAACAGCATGAGCTCGGTAAGGTCGTGCATACTGGCGGCTGGCCGCTT
ACCGAAGGTGCCTCTGGCGGTGGATTCATGTATCACCTGGAGAATAATCAGATCGCCGTCGGCTTGATTATCGATCTTAA
CTATAAGAATCCACACTTAAGTCCATTCGATGAGTTCCAGCGTTATAAGACTCACCCTGTTATCGCTAAGACGCTAACTG
GCGGCGAACGTATCGCTTACGGTGCAAGAGCCATTACTAAAGGTGGTCTAAACTCTCTACCTAAGCTGACATTCCCTGGC
GGCATGATTATTGGCTGTGATGCTGGCACGCTCAACTTCGCCAAGATCAAAGGCACACATACGGCAATGAAGAGCGGTAT
GCTGGCTGCAGAGACACTCGCTCAGGCTATGATGGCAGGTGTTGAGGCGGGTAAAGATCTTGACTGCTTACAAGACAGAT
TCGATGAAAGCTGGCTCAAAGAGGAGCTATACGCCTCGCGTAACTTCGGTCCTGCTATGCATAAGTTCGGTACCTACCTA
GGCGGCGCATTTAACTTTATCGATCAAAATTGGTTTGGCGGCAAACTGCCTATCACTCTACGCGATGAGAAGCCTGATTA
TGCGCAGATGGCTGAGGTGAGTGCTTACAGCAAGATTGATTACCCTAAGCCTGATGGCAAGTTGAGTTTCGATAAGCTGT
CTTCAGTTTATTTGTCTAATACCTTCCATGAAGAAGATCAGCTATGCCATCTACGCTTAAAGGATGCGCGCATCCCCATC
GAAGTGAACTTAATCAAATTCGATGAGCCGGCACAGCGTTACTGCCCTGCTGGCGTGTATGAGATCGTCGAGGAAGCCGG
TGAGAAAAAGTTTGTCATCAATGGGCAGAACTGCATTCACTGTAAGACCTGCGATATCAAAGATCCAAGCCAGAATATCA
CTTGGGTTACTCCCGAGGGTGGCGGTGGACCAAACTACCCCAACATGTAG

Upstream 100 bases:

>100_bases
CAGGTAAGGTGAACTAAAATATTAAAACACCCGTTTATAGGCTGCTTGATTCAATCGGCACTATTGTCATCGGGGGAAAA
TAAGAAGGAAAGGTGATCTG

Downstream 100 bases:

>100_bases
TAGCGCTCCGCCAAGTAAAGAAGCCGCCTTATGAAGAAAGTGGTTTAGGACTGAAAACAAAAATGCCTATCGAATATAGT
CGATAGGCATTTTGATTTTA

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MERESMEFDVVIVGAGPAGLATACRLMQISKDTGQELTVCVVEKGSEVGAHILSGAVFEPKVLDELFDDWRDKNAPLLTA
VTHDEIHMLSSATDARAMPNALVPKTMHNEGNYIISVGNLCRWLAERAEELAVEVFPGFPASELLFNEDGSVKGIQIGDM
GVGEDGQPKDGYEPGMELHAKYTVFGEGCRGHLGKQLIEKYHLDNGKTPQHYGLGFKEIWTVPSEQHELGKVVHTGGWPL
TEGASGGGFMYHLENNQIAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKTLTGGERIAYGARAITKGGLNSLPKLTFPG
GMIIGCDAGTLNFAKIKGTHTAMKSGMLAAETLAQAMMAGVEAGKDLDCLQDRFDESWLKEELYASRNFGPAMHKFGTYL
GGAFNFIDQNWFGGKLPITLRDEKPDYAQMAEVSAYSKIDYPKPDGKLSFDKLSSVYLSNTFHEEDQLCHLRLKDARIPI
EVNLIKFDEPAQRYCPAGVYEIVEEAGEKKFVINGQNCIHCKTCDIKDPSQNITWVTPEGGGGPNYPNM

Sequences:

>Translated_549_residues
MERESMEFDVVIVGAGPAGLATACRLMQISKDTGQELTVCVVEKGSEVGAHILSGAVFEPKVLDELFDDWRDKNAPLLTA
VTHDEIHMLSSATDARAMPNALVPKTMHNEGNYIISVGNLCRWLAERAEELAVEVFPGFPASELLFNEDGSVKGIQIGDM
GVGEDGQPKDGYEPGMELHAKYTVFGEGCRGHLGKQLIEKYHLDNGKTPQHYGLGFKEIWTVPSEQHELGKVVHTGGWPL
TEGASGGGFMYHLENNQIAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKTLTGGERIAYGARAITKGGLNSLPKLTFPG
GMIIGCDAGTLNFAKIKGTHTAMKSGMLAAETLAQAMMAGVEAGKDLDCLQDRFDESWLKEELYASRNFGPAMHKFGTYL
GGAFNFIDQNWFGGKLPITLRDEKPDYAQMAEVSAYSKIDYPKPDGKLSFDKLSSVYLSNTFHEEDQLCHLRLKDARIPI
EVNLIKFDEPAQRYCPAGVYEIVEEAGEKKFVINGQNCIHCKTCDIKDPSQNITWVTPEGGGGPNYPNM
>Mature_549_residues
MERESMEFDVVIVGAGPAGLATACRLMQISKDTGQELTVCVVEKGSEVGAHILSGAVFEPKVLDELFDDWRDKNAPLLTA
VTHDEIHMLSSATDARAMPNALVPKTMHNEGNYIISVGNLCRWLAERAEELAVEVFPGFPASELLFNEDGSVKGIQIGDM
GVGEDGQPKDGYEPGMELHAKYTVFGEGCRGHLGKQLIEKYHLDNGKTPQHYGLGFKEIWTVPSEQHELGKVVHTGGWPL
TEGASGGGFMYHLENNQIAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKTLTGGERIAYGARAITKGGLNSLPKLTFPG
GMIIGCDAGTLNFAKIKGTHTAMKSGMLAAETLAQAMMAGVEAGKDLDCLQDRFDESWLKEELYASRNFGPAMHKFGTYL
GGAFNFIDQNWFGGKLPITLRDEKPDYAQMAEVSAYSKIDYPKPDGKLSFDKLSSVYLSNTFHEEDQLCHLRLKDARIPI
EVNLIKFDEPAQRYCPAGVYEIVEEAGEKKFVINGQNCIHCKTCDIKDPSQNITWVTPEGGGGPNYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=559, Percent_Identity=50.4472271914132, Blast_Score=560, Evalue=1e-159,
Organism=Escherichia coli, GI1787991, Length=337, Percent_Identity=27.0029673590504, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1786227, Length=363, Percent_Identity=27.2727272727273, Blast_Score=99, Evalue=9e-22,
Organism=Escherichia coli, GI87082155, Length=336, Percent_Identity=25.297619047619, Blast_Score=77, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25144720, Length=559, Percent_Identity=49.5527728085868, Blast_Score=542, Evalue=1e-154,
Organism=Saccharomyces cerevisiae, GI6324932, Length=569, Percent_Identity=45.1669595782074, Blast_Score=464, Evalue=1e-131,
Organism=Drosophila melanogaster, GI24652256, Length=556, Percent_Identity=51.7985611510791, Blast_Score=563, Evalue=1e-160,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60287; Mature: 60287

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERESMEFDVVIVGAGPAGLATACRLMQISKDTGQELTVCVVEKGSEVGAHILSGAVFEP
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHCCCCCCH
KVLDELFDDWRDKNAPLLTAVTHDEIHMLSSATDARAMPNALVPKTMHNEGNYIISVGNL
HHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCHHHCCCCCCCCCEECCCCCEEEEHHHH
CRWLAERAEELAVEVFPGFPASELLFNEDGSVKGIQIGDMGVGEDGQPKDGYEPGMELHA
HHHHHHHHHHEEEEECCCCCHHHHEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEE
KYTVFGEGCRGHLGKQLIEKYHLDNGKTPQHYGLGFKEIWTVPSEQHELGKVVHTGGWPL
EEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHCCCCCCHHHHHHEEECCCCCC
TEGASGGGFMYHLENNQIAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKTLTGGERIAY
CCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEC
GARAITKGGLNSLPKLTFPGGMIIGCDAGTLNFAKIKGTHTAMKSGMLAAETLAQAMMAG
CHHHHHCCCCCCCCCEECCCCEEEECCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHH
VEAGKDLDCLQDRFDESWLKEELYASRNFGPAMHKFGTYLGGAFNFIDQNWFGGKLPITL
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCCCCEEEEEE
RDEKPDYAQMAEVSAYSKIDYPKPDGKLSFDKLSSVYLSNTFHEEDQLCHLRLKDARIPI
ECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
EVNLIKFDEPAQRYCPAGVYEIVEEAGEKKFVINGQNCIHCKTCDIKDPSQNITWVTPEG
EEEEEECCCCHHHHCCCHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCCEEEECCCC
GGGPNYPNM
CCCCCCCCC
>Mature Secondary Structure
MERESMEFDVVIVGAGPAGLATACRLMQISKDTGQELTVCVVEKGSEVGAHILSGAVFEP
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHCCCCCCH
KVLDELFDDWRDKNAPLLTAVTHDEIHMLSSATDARAMPNALVPKTMHNEGNYIISVGNL
HHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCHHHCCCCCCCCCEECCCCCEEEEHHHH
CRWLAERAEELAVEVFPGFPASELLFNEDGSVKGIQIGDMGVGEDGQPKDGYEPGMELHA
HHHHHHHHHHEEEEECCCCCHHHHEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEE
KYTVFGEGCRGHLGKQLIEKYHLDNGKTPQHYGLGFKEIWTVPSEQHELGKVVHTGGWPL
EEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHCCCCCCHHHHHHEEECCCCCC
TEGASGGGFMYHLENNQIAVGLIIDLNYKNPHLSPFDEFQRYKTHPVIAKTLTGGERIAY
CCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEC
GARAITKGGLNSLPKLTFPGGMIIGCDAGTLNFAKIKGTHTAMKSGMLAAETLAQAMMAG
CHHHHHCCCCCCCCCEECCCCEEEECCCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHH
VEAGKDLDCLQDRFDESWLKEELYASRNFGPAMHKFGTYLGGAFNFIDQNWFGGKLPITL
HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCCCCCEEEEEE
RDEKPDYAQMAEVSAYSKIDYPKPDGKLSFDKLSSVYLSNTFHEEDQLCHLRLKDARIPI
ECCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCE
EVNLIKFDEPAQRYCPAGVYEIVEEAGEKKFVINGQNCIHCKTCDIKDPSQNITWVTPEG
EEEEEECCCCHHHHCCCHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCCCEEEECCCC
GGGPNYPNM
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]