| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963912
Identifier: 157963912
GI number: 157963912
Start: 4986700
End: 4988730
Strand: Reverse
Name: 157963912
Synonym: Spea_4101
Alternate gene names: NA
Gene position: 4988730-4986700 (Counterclockwise)
Preceding gene: 157963913
Following gene: 157963911
Centisome position: 96.41
GC content: 49.24
Gene sequence:
>2031_bases ATGGTGCCCTTCAGTAGAATATTCGCTCTCGTCTTTTTAAGTTTCATATTAGCAGCTTGTGGTGGAGATGACGGTGATGG TCCGGTTTGTCCTTCAAATGTCCCCTGTGAATTAATCAACGATAACGCTGCGCCTACAGCGGCTGTGATTTACGAGGTTT CGTTAACCATTACCGATGCCGAGGGCAATGAGATCTCATCTATCTCTTCGGTCAATCCAGGTAAGCTGGTTGCTAATGTT AGCGGCATCACTGAACCGACTATCGTTAGCTTTGCTAGCACGCTAGGGGAGCTCCCTATTACCACGGCGGTTACCGACAG TGATGGCAATGCCAGTGTGGTTATCTACGCGGGTAACGAGTTAGGAGCGAGTTCGGTAACTGCGAGCCTTGTTTCTGGTG AACAAGATATGGCGATCTTAGTCATTGGTGCCACCAACTTAGAGATGGGTAGCGGTGACCCACTGCAGTCCGGTGTCGCA GAGGTGAGTACCGCTTCGCTATCGGCGGGCGGAACTGCAAGCGTGTCGGTGATGATTGTCGATGAACAAGGGCAGCCTTT CAATGAAGCTATAGATGTTTTCTTTAGCTCTGGTTGTTCGTTGCTGTCTACGCCATTAGCTGAGGTGAGTTCGCCGGTAA TGTTAGTAAAGGGGGTCGCGACCAGTACTTATCTTGCAAAGGGCTGCGTTGGCGACGATACCATTAATATCAGTGCCAAT GCCGGTGGCATCAATCTATTTGCCACTGGAAGTATTAATGTTCTAGCCGCAGAGAAGGGCAGTATTGTGTTTGTATCGGC GACACCGAGTGATATTGGCATTTTGGGCTCGGGCAGGGATGAGTCATCCACAGTGCTGTTTAAGGTGCTAGATACCAACG GTAATCCTGTCAGTAATGCTGCGGTGAGTTTTGCTTTGAATACCCAAGTTGGTGGGCTAAAAATTCAACCGACTACGGCA AGCACCAATGGCAGCGGTATAGTCCAAACCATAGTGACATCAGGTACAGTGGCCACACCTGTAAGGGTAACGGCAAGCAT CGACAACAGTAATCCACTCCTATCGAGTCAGTCGAGCACCTTAGTGGTATCAACCGGGATCCCAGATCAAGATAGCTTTT CATTGTCTGCAGAGATATTAAATGCCGAGGGCTGGAGCTATGACGGCGAGCAGGTCAAGATCACTGCTAGGCTAGCGGAT GCGTTTAATAATCTCGCACCAGACGGAACTGCTGTGGCCTTTGTCACCGAAGGTGGTGCTATCGGTTCTTCCTGTTTCAC GGCTAATGGCGAGTGTAGCGTGACTTGGTCTAGCCAGAACCCACGCCCGCTAAATGGTCGGGCAACCATTACCGCCACAG CTATTGGTGAAGAGTCTTTCCCTGACTCTAATGGTAATGGTCGTTTCGATGCCGCTGAGATGGCCGCCTTTTTAGCAACG GATGTAGCAGGGCGCTCCAATGATATGGATGAAGCCTTTAACGATTACAACGAAGATGGCAGCTTCAATGAAGATGGGTT AGAAGAGTTAATAGACTTTAATGGTGACGGTGCATTTACCGCTAGAGATGGTATATATAACGGTGTGTTGTGTAGCGACC CGGTACATAGTGGTTGTGCCGATGGCGTCTCCGATTCTAAGTCGATTAATGTTCGAGATAGCCTAGTGCTGATCATGTCT GGAAGTACCGCATTTGGAAGTGACCTCACTGTTGTGGACAGCTCAAATGATAACGGCGACAGTGTCTTAGACCTATATGG TAAAGAGACGGGACAGGTTTCATTAATCATTAAAGATATCAATGGGCAACAGATGCCTGCTGGGACTAAGGTGGAGATCT CTGCTACGGCGGGAACGGTAGTGAGCAAGAGCAGCTTCGTTTGGCCTTCGACGAATGCGCCGGGAGGGCTTGGTTTTGGT ATCTTGGTGAAGGGTGAAGACACCGCAAACACCGGAGCGCTGTTAATTGAGGTGCAAACGCCAAATGGTGTGGATACTTT GGTAACAACTATCCCAATCACCATTCATTAG
Upstream 100 bases:
>100_bases GTAAAATTAAATGTGAAATATTGCGGATATTCACCTATACCTATTGAGTGCCTGATTTTTATACACCTTGTATACACCTA AGCTTTATATGGAGATAGAT
Downstream 100 bases:
>100_bases TTATTAGTCTTTTTTGATAACCATAAAGGGTGCTTATAGCACCCTTTTTTGTTTTCAAGCTGCGCTTGAGTTTTAAGTTA GACTTTGTCTAACAATTCGA
Product: Ig domain-containing protein
Products: NA
Alternate protein names: Ig Domain Domain Protein; Intimin/Invasin Family Protein; Invasin Domain-Containing Protein
Number of amino acids: Translated: 676; Mature: 676
Protein sequence:
>676_residues MVPFSRIFALVFLSFILAACGGDDGDGPVCPSNVPCELINDNAAPTAAVIYEVSLTITDAEGNEISSISSVNPGKLVANV SGITEPTIVSFASTLGELPITTAVTDSDGNASVVIYAGNELGASSVTASLVSGEQDMAILVIGATNLEMGSGDPLQSGVA EVSTASLSAGGTASVSVMIVDEQGQPFNEAIDVFFSSGCSLLSTPLAEVSSPVMLVKGVATSTYLAKGCVGDDTINISAN AGGINLFATGSINVLAAEKGSIVFVSATPSDIGILGSGRDESSTVLFKVLDTNGNPVSNAAVSFALNTQVGGLKIQPTTA STNGSGIVQTIVTSGTVATPVRVTASIDNSNPLLSSQSSTLVVSTGIPDQDSFSLSAEILNAEGWSYDGEQVKITARLAD AFNNLAPDGTAVAFVTEGGAIGSSCFTANGECSVTWSSQNPRPLNGRATITATAIGEESFPDSNGNGRFDAAEMAAFLAT DVAGRSNDMDEAFNDYNEDGSFNEDGLEELIDFNGDGAFTARDGIYNGVLCSDPVHSGCADGVSDSKSINVRDSLVLIMS GSTAFGSDLTVVDSSNDNGDSVLDLYGKETGQVSLIIKDINGQQMPAGTKVEISATAGTVVSKSSFVWPSTNAPGGLGFG ILVKGEDTANTGALLIEVQTPNGVDTLVTTIPITIH
Sequences:
>Translated_676_residues MVPFSRIFALVFLSFILAACGGDDGDGPVCPSNVPCELINDNAAPTAAVIYEVSLTITDAEGNEISSISSVNPGKLVANV SGITEPTIVSFASTLGELPITTAVTDSDGNASVVIYAGNELGASSVTASLVSGEQDMAILVIGATNLEMGSGDPLQSGVA EVSTASLSAGGTASVSVMIVDEQGQPFNEAIDVFFSSGCSLLSTPLAEVSSPVMLVKGVATSTYLAKGCVGDDTINISAN AGGINLFATGSINVLAAEKGSIVFVSATPSDIGILGSGRDESSTVLFKVLDTNGNPVSNAAVSFALNTQVGGLKIQPTTA STNGSGIVQTIVTSGTVATPVRVTASIDNSNPLLSSQSSTLVVSTGIPDQDSFSLSAEILNAEGWSYDGEQVKITARLAD AFNNLAPDGTAVAFVTEGGAIGSSCFTANGECSVTWSSQNPRPLNGRATITATAIGEESFPDSNGNGRFDAAEMAAFLAT DVAGRSNDMDEAFNDYNEDGSFNEDGLEELIDFNGDGAFTARDGIYNGVLCSDPVHSGCADGVSDSKSINVRDSLVLIMS GSTAFGSDLTVVDSSNDNGDSVLDLYGKETGQVSLIIKDINGQQMPAGTKVEISATAGTVVSKSSFVWPSTNAPGGLGFG ILVKGEDTANTGALLIEVQTPNGVDTLVTTIPITIH >Mature_676_residues MVPFSRIFALVFLSFILAACGGDDGDGPVCPSNVPCELINDNAAPTAAVIYEVSLTITDAEGNEISSISSVNPGKLVANV SGITEPTIVSFASTLGELPITTAVTDSDGNASVVIYAGNELGASSVTASLVSGEQDMAILVIGATNLEMGSGDPLQSGVA EVSTASLSAGGTASVSVMIVDEQGQPFNEAIDVFFSSGCSLLSTPLAEVSSPVMLVKGVATSTYLAKGCVGDDTINISAN AGGINLFATGSINVLAAEKGSIVFVSATPSDIGILGSGRDESSTVLFKVLDTNGNPVSNAAVSFALNTQVGGLKIQPTTA STNGSGIVQTIVTSGTVATPVRVTASIDNSNPLLSSQSSTLVVSTGIPDQDSFSLSAEILNAEGWSYDGEQVKITARLAD AFNNLAPDGTAVAFVTEGGAIGSSCFTANGECSVTWSSQNPRPLNGRATITATAIGEESFPDSNGNGRFDAAEMAAFLAT DVAGRSNDMDEAFNDYNEDGSFNEDGLEELIDFNGDGAFTARDGIYNGVLCSDPVHSGCADGVSDSKSINVRDSLVLIMS GSTAFGSDLTVVDSSNDNGDSVLDLYGKETGQVSLIIKDINGQQMPAGTKVEISATAGTVVSKSSFVWPSTNAPGGLGFG ILVKGEDTANTGALLIEVQTPNGVDTLVTTIPITIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68555; Mature: 68555
Theoretical pI: Translated: 3.67; Mature: 3.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPFSRIFALVFLSFILAACGGDDGDGPVCPSNVPCELINDNAAPTAAVIYEVSLTITDA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEEECC EGNEISSISSVNPGKLVANVSGITEPTIVSFASTLGELPITTAVTDSDGNASVVIYAGNE CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCC LGASSVTASLVSGEQDMAILVIGATNLEMGSGDPLQSGVAEVSTASLSAGGTASVSVMIV CCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHEEEEECCCCCCEEEEEEE DEQGQPFNEAIDVFFSSGCSLLSTPLAEVSSPVMLVKGVATSTYLAKGCVGDDTINISAN CCCCCCHHHHHHHHHHCCCHHHHCCHHHHCCCEEEEECCCHHHHHHCCCCCCCEEEEEEC AGGINLFATGSINVLAAEKGSIVFVSATPSDIGILGSGRDESSTVLFKVLDTNGNPVSNA CCCEEEEEECCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCCCE AVSFALNTQVGGLKIQPTTASTNGSGIVQTIVTSGTVATPVRVTASIDNSNPLLSSQSST EEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCEECCEEEEEEECCCCCCCCCCCCE LVVSTGIPDQDSFSLSAEILNAEGWSYDGEQVKITARLADAFNNLAPDGTAVAFVTEGGA EEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEHHHHHCCCCCCCEEEEEECCCC IGSSCFTANGECSVTWSSQNPRPLNGRATITATAIGEESFPDSNGNGRFDAAEMAAFLAT CCCCEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH DVAGRSNDMDEAFNDYNEDGSFNEDGLEELIDFNGDGAFTARDGIYNGVLCSDPVHSGCA HCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCCCC DGVSDSKSINVRDSLVLIMSGSTAFGSDLTVVDSSNDNGDSVLDLYGKETGQVSLIIKDI CCCCCCCEEEECCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEC NGQQMPAGTKVEISATAGTVVSKSSFVWPSTNAPGGLGFGILVKGEDTANTGALLIEVQT CCCCCCCCCEEEEEECCCEEEECCEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEC PNGVDTLVTTIPITIH CCCCEEEEEEEEEEEC >Mature Secondary Structure MVPFSRIFALVFLSFILAACGGDDGDGPVCPSNVPCELINDNAAPTAAVIYEVSLTITDA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEEEECC EGNEISSISSVNPGKLVANVSGITEPTIVSFASTLGELPITTAVTDSDGNASVVIYAGNE CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCC LGASSVTASLVSGEQDMAILVIGATNLEMGSGDPLQSGVAEVSTASLSAGGTASVSVMIV CCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHEEEEECCCCCCEEEEEEE DEQGQPFNEAIDVFFSSGCSLLSTPLAEVSSPVMLVKGVATSTYLAKGCVGDDTINISAN CCCCCCHHHHHHHHHHCCCHHHHCCHHHHCCCEEEEECCCHHHHHHCCCCCCCEEEEEEC AGGINLFATGSINVLAAEKGSIVFVSATPSDIGILGSGRDESSTVLFKVLDTNGNPVSNA CCCEEEEEECCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEEEEEEEECCCCCCCCE AVSFALNTQVGGLKIQPTTASTNGSGIVQTIVTSGTVATPVRVTASIDNSNPLLSSQSST EEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCEECCEEEEEEECCCCCCCCCCCCE LVVSTGIPDQDSFSLSAEILNAEGWSYDGEQVKITARLADAFNNLAPDGTAVAFVTEGGA EEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEHHHHHCCCCCCCEEEEEECCCC IGSSCFTANGECSVTWSSQNPRPLNGRATITATAIGEESFPDSNGNGRFDAAEMAAFLAT CCCCEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH DVAGRSNDMDEAFNDYNEDGSFNEDGLEELIDFNGDGAFTARDGIYNGVLCSDPVHSGCA HCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCCCC DGVSDSKSINVRDSLVLIMSGSTAFGSDLTVVDSSNDNGDSVLDLYGKETGQVSLIIKDI CCCCCCCEEEECCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEC NGQQMPAGTKVEISATAGTVVSKSSFVWPSTNAPGGLGFGILVKGEDTANTGALLIEVQT CCCCCCCCCEEEEEECCCEEEECCEEECCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEC PNGVDTLVTTIPITIH CCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA