| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963911
Identifier: 157963911
GI number: 157963911
Start: 4984821
End: 4985825
Strand: Reverse
Name: 157963911
Synonym: Spea_4100
Alternate gene names: NA
Gene position: 4985825-4984821 (Counterclockwise)
Preceding gene: 157963912
Following gene: 157963904
Centisome position: 96.35
GC content: 37.61
Gene sequence:
>1005_bases GTGGAATTTCCAGGCGAAAAGTTAGTTATAAAAATGTGGGAGACTCTAACTGAAAAAGGAATTGGTTCAGCGCTGCAACC TTGGCATGAAAAACGTCTAGGAGAAGCAAAAAATCAGGTAAGGCGTAATGAGATTATAATGTTGGCTGAAGCTGAAAAAA TGGCTGCCGATATAAAAGCGGGTAGATTGAAACCTATTGACACAACTACTCCACTAATTAGTGTGTCTGCGCAAGAAAGA ATAGAGCCAACTATTAGCCTTCCCGATATAGCAATTACAGCTGCCAATATTAATGTTTCAGAAACCATTAGGAAAGAAGT TAACGTAAGTAAAGCCGTCCTTGCTGCCGAGAACATATTGGCTAATGAAGAGCAGGAAGTTCCAACTCAAAATGTAGAAG ATGATTGGTTGTACTCATGGAGAGAAAATGCCGGTAAAGTCTCATCGGAAGAATTACAGGATCTTTGGGGGCGAATTTTA GCGGGAGAAATTAAAAACCCGGGTAGTTACTCTTTTAGAACAATGGAGTTTCTAAAAGGATTATCTAAAGACGAGGCTGA ATTAATTAGTAAGCTTGCGCAATTTGTAGTTGACGGTTCAATTTTTCGGCATAAAGATACTTTCCTAGAGCAAAGTGGCA TTAGCTTTAATACATTGTTATTTTTACAAGAAATTGGTGTCGTTGCTGGTGTGGAAGCTACAGGTTTACATGTAACGTGG AATTCTTTATTACCTAATAGCTATATGAAAGCATTAGTATCTAACAATAAGGTAATAGTGTTAGAGCATGATGATGTTAA TAAAAAAGCTGATGCAGGGGTATACCAATTAACTAGTGTGGGTAGGCAAGTATTAGCCTTGGCTTCATTTGGTTCAAGAG ACGACTATTTACTTTCTATTGCCCAAGATTATGTAAAAAAAGGCTATAAAGTAAAGTTAGGAGATTGGCGGCCTTTGAAT GCAACACGAGGTCAAATTCTAAACCCTCAAGAAGTTAAAGTTTAA
Upstream 100 bases:
>100_bases GCGAACATTATTAAGACGCATTGATAATAATTAAATGTGGAACACTGATAACGAATATCTGTGTTGCTCAATAAGCTGAT AGATATTTAATGGAGTAAAT
Downstream 100 bases:
>100_bases AACCTGTATCAGTCAGATAACAAAACCCGACATTTACGTCGGGTTTTATGTATCTAGCGTACAGCTAACTCCAAGCTAAC AGTTAACCACTGTGGTGACA
Product: membrane-fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MEFPGEKLVIKMWETLTEKGIGSALQPWHEKRLGEAKNQVRRNEIIMLAEAEKMAADIKAGRLKPIDTTTPLISVSAQER IEPTISLPDIAITAANINVSETIRKEVNVSKAVLAAENILANEEQEVPTQNVEDDWLYSWRENAGKVSSEELQDLWGRIL AGEIKNPGSYSFRTMEFLKGLSKDEAELISKLAQFVVDGSIFRHKDTFLEQSGISFNTLLFLQEIGVVAGVEATGLHVTW NSLLPNSYMKALVSNNKVIVLEHDDVNKKADAGVYQLTSVGRQVLALASFGSRDDYLLSIAQDYVKKGYKVKLGDWRPLN ATRGQILNPQEVKV
Sequences:
>Translated_334_residues MEFPGEKLVIKMWETLTEKGIGSALQPWHEKRLGEAKNQVRRNEIIMLAEAEKMAADIKAGRLKPIDTTTPLISVSAQER IEPTISLPDIAITAANINVSETIRKEVNVSKAVLAAENILANEEQEVPTQNVEDDWLYSWRENAGKVSSEELQDLWGRIL AGEIKNPGSYSFRTMEFLKGLSKDEAELISKLAQFVVDGSIFRHKDTFLEQSGISFNTLLFLQEIGVVAGVEATGLHVTW NSLLPNSYMKALVSNNKVIVLEHDDVNKKADAGVYQLTSVGRQVLALASFGSRDDYLLSIAQDYVKKGYKVKLGDWRPLN ATRGQILNPQEVKV >Mature_334_residues MEFPGEKLVIKMWETLTEKGIGSALQPWHEKRLGEAKNQVRRNEIIMLAEAEKMAADIKAGRLKPIDTTTPLISVSAQER IEPTISLPDIAITAANINVSETIRKEVNVSKAVLAAENILANEEQEVPTQNVEDDWLYSWRENAGKVSSEELQDLWGRIL AGEIKNPGSYSFRTMEFLKGLSKDEAELISKLAQFVVDGSIFRHKDTFLEQSGISFNTLLFLQEIGVVAGVEATGLHVTW NSLLPNSYMKALVSNNKVIVLEHDDVNKKADAGVYQLTSVGRQVLALASFGSRDDYLLSIAQDYVKKGYKVKLGDWRPLN ATRGQILNPQEVKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37195; Mature: 37195
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFPGEKLVIKMWETLTEKGIGSALQPWHEKRLGEAKNQVRRNEIIMLAEAEKMAADIKA CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHC GRLKPIDTTTPLISVSAQERIEPTISLPDIAITAANINVSETIRKEVNVSKAVLAAENIL CCCCCCCCCCCEEECCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH ANEEQEVPTQNVEDDWLYSWRENAGKVSSEELQDLWGRILAGEIKNPGSYSFRTMEFLKG CCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC LSKDEAELISKLAQFVVDGSIFRHKDTFLEQSGISFNTLLFLQEIGVVAGVEATGLHVTW CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEH NSLLPNSYMKALVSNNKVIVLEHDDVNKKADAGVYQLTSVGRQVLALASFGSRDDYLLSI HHHCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH AQDYVKKGYKVKLGDWRPLNATRGQILNPQEVKV HHHHHHCCCEEEECCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MEFPGEKLVIKMWETLTEKGIGSALQPWHEKRLGEAKNQVRRNEIIMLAEAEKMAADIKA CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHC GRLKPIDTTTPLISVSAQERIEPTISLPDIAITAANINVSETIRKEVNVSKAVLAAENIL CCCCCCCCCCCEEECCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH ANEEQEVPTQNVEDDWLYSWRENAGKVSSEELQDLWGRILAGEIKNPGSYSFRTMEFLKG CCCHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC LSKDEAELISKLAQFVVDGSIFRHKDTFLEQSGISFNTLLFLQEIGVVAGVEATGLHVTW CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEH NSLLPNSYMKALVSNNKVIVLEHDDVNKKADAGVYQLTSVGRQVLALASFGSRDDYLLSI HHHCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH AQDYVKKGYKVKLGDWRPLNATRGQILNPQEVKV HHHHHHCCCEEEECCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA