| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963886
Identifier: 157963886
GI number: 157963886
Start: 4955287
End: 4956273
Strand: Reverse
Name: 157963886
Synonym: Spea_4075
Alternate gene names: NA
Gene position: 4956273-4955287 (Counterclockwise)
Preceding gene: 157963887
Following gene: 157963885
Centisome position: 95.78
GC content: 45.69
Gene sequence:
>987_bases ATGACTAATACACAAAAAGGTTGGATGGCTGCGATTTTCGTTGGTCTGTTATGGGGTATCCCGTGGATTGTTGGTACACC GATTCTTGAAGTAATGGATCCACAAGTACTAGTTTGGTTACGCTATACCGTTGCATTCGTGACCCTAGGTTTGATTTTCA ACATCGGTCTTGCGTCTGGCAAGATGAAGAAGAAAACCGATTTTAAACTTAACTGGCAGAACCGTAATGACATCTTCTGG GCTGCATGTTGCGGTATCATTGGTCAAGGCTCTTTCAGCTTCCTATCATTCCTATCTTTGGATTATATTACCGCCTCTGA AAACGGCGTGATCCAAGGTTTGATCCCAATCCTTATCTTGAGTGTTGGTTTCCTACGCCACGGTGAGCGTTTCACTGTTA TGCAAATCATGTGTGCGTTAGGTGCTTTCCTAGGTGTGGCGATTCTAGTAATGGACCCACAGTCTGAAACTAAAGGCTTC AACATCGGTCACCTGATCTGTTTCGGTTCAGCAGCAAGCTTTGCATGTATGGCTTACGCTCGTGCAAAACTAGCAGACAA GTACGGTTCAGTAGCGACTATGTTCCACCAGTTTGTATTTGCATCACTAGGCTTTGGTCTGTACCTGTTCGTTGTAGGCG CTGATTTTAGCTCTGCATTGAACGTATTCAGCTCTCCACTACGTATCCTATGTATCGTTATCTTAGGTGTGTGTATCTCA GGTATGAGCTACCTAGTTTACATCTACGGTATGGAGCGTGTAGGTGTTGACGGTACCGGTATGGCACTAAACCTAATGCC ACTATCTTCATTCATCCTAGCGGTATTCGCACTAGGTGAGCAGGTAACGCCGATGCGCTTAGTTGCTATCGCAGTGGTTA TTACCTCGATGATCGCCTTCATGAAGCTTGGCAACAAGAACAAGGCCAAAGCAGAAGAAGTTGAAGCTGAGCTAGCTGTA GCACCTAAGCCTTGCCGCAGCCAGTAA
Upstream 100 bases:
>100_bases GACCGGCAACGTGGCTCAATGCCCAGGTTACGGCAAACTACTTAATAATCAAACAGCTTAAGCTGTTGACTACCAATTAC AAATTGTTGGAAAAATAAAA
Downstream 100 bases:
>100_bases CTGAATAATTCAGTTAGCAAATTGAATCAATTTTTATCACCGGTGACCTAGTCACCGGTTTGTTGTTATAAGAGAAAAGC ATATGAATATCGAACAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MTNTQKGWMAAIFVGLLWGIPWIVGTPILEVMDPQVLVWLRYTVAFVTLGLIFNIGLASGKMKKKTDFKLNWQNRNDIFW AACCGIIGQGSFSFLSFLSLDYITASENGVIQGLIPILILSVGFLRHGERFTVMQIMCALGAFLGVAILVMDPQSETKGF NIGHLICFGSAASFACMAYARAKLADKYGSVATMFHQFVFASLGFGLYLFVVGADFSSALNVFSSPLRILCIVILGVCIS GMSYLVYIYGMERVGVDGTGMALNLMPLSSFILAVFALGEQVTPMRLVAIAVVITSMIAFMKLGNKNKAKAEEVEAELAV APKPCRSQ
Sequences:
>Translated_328_residues MTNTQKGWMAAIFVGLLWGIPWIVGTPILEVMDPQVLVWLRYTVAFVTLGLIFNIGLASGKMKKKTDFKLNWQNRNDIFW AACCGIIGQGSFSFLSFLSLDYITASENGVIQGLIPILILSVGFLRHGERFTVMQIMCALGAFLGVAILVMDPQSETKGF NIGHLICFGSAASFACMAYARAKLADKYGSVATMFHQFVFASLGFGLYLFVVGADFSSALNVFSSPLRILCIVILGVCIS GMSYLVYIYGMERVGVDGTGMALNLMPLSSFILAVFALGEQVTPMRLVAIAVVITSMIAFMKLGNKNKAKAEEVEAELAV APKPCRSQ >Mature_327_residues TNTQKGWMAAIFVGLLWGIPWIVGTPILEVMDPQVLVWLRYTVAFVTLGLIFNIGLASGKMKKKTDFKLNWQNRNDIFWA ACCGIIGQGSFSFLSFLSLDYITASENGVIQGLIPILILSVGFLRHGERFTVMQIMCALGAFLGVAILVMDPQSETKGFN IGHLICFGSAASFACMAYARAKLADKYGSVATMFHQFVFASLGFGLYLFVVGADFSSALNVFSSPLRILCIVILGVCISG MSYLVYIYGMERVGVDGTGMALNLMPLSSFILAVFALGEQVTPMRLVAIAVVITSMIAFMKLGNKNKAKAEEVEAELAVA PKPCRSQ
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35619; Mature: 35488
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTQKGWMAAIFVGLLWGIPWIVGTPILEVMDPQVLVWLRYTVAFVTLGLIFNIGLASG CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC KMKKKTDFKLNWQNRNDIFWAACCGIIGQGSFSFLSFLSLDYITASENGVIQGLIPILIL CCCCCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHH SVGFLRHGERFTVMQIMCALGAFLGVAILVMDPQSETKGFNIGHLICFGSAASFACMAYA HHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHH RAKLADKYGSVATMFHQFVFASLGFGLYLFVVGADFSSALNVFSSPLRILCIVILGVCIS HHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GMSYLVYIYGMERVGVDGTGMALNLMPLSSFILAVFALGEQVTPMRLVAIAVVITSMIAF HHHHHHHHEEHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH MKLGNKNKAKAEEVEAELAVAPKPCRSQ HHCCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TNTQKGWMAAIFVGLLWGIPWIVGTPILEVMDPQVLVWLRYTVAFVTLGLIFNIGLASG CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC KMKKKTDFKLNWQNRNDIFWAACCGIIGQGSFSFLSFLSLDYITASENGVIQGLIPILIL CCCCCCCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHH SVGFLRHGERFTVMQIMCALGAFLGVAILVMDPQSETKGFNIGHLICFGSAASFACMAYA HHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHH RAKLADKYGSVATMFHQFVFASLGFGLYLFVVGADFSSALNVFSSPLRILCIVILGVCIS HHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GMSYLVYIYGMERVGVDGTGMALNLMPLSSFILAVFALGEQVTPMRLVAIAVVITSMIAF HHHHHHHHEEHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH MKLGNKNKAKAEEVEAELAVAPKPCRSQ HHCCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA