| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963866
Identifier: 157963866
GI number: 157963866
Start: 4926314
End: 4927336
Strand: Reverse
Name: 157963866
Synonym: Spea_4055
Alternate gene names: NA
Gene position: 4927336-4926314 (Counterclockwise)
Preceding gene: 157963867
Following gene: 157963865
Centisome position: 95.22
GC content: 42.13
Gene sequence:
>1023_bases ATGAATCTATTTAGCTTCTTGTTTGGCGCATCGATAAAGCCTATACGTAACACTGATCACCTCGTTGCCGCGCCATCTGA GATAGATGAATTTAAGCAGTATTATCAGCAGCATCTTGAGCCACTTACCAGCAAGTTTGAAAATGCCCGTGTTGCGAGTC TAAAAGCGTGTCGTCAGCGTTTGTACCTGTGTGCTGCCATCTATATTGGTATCGCGATCTTGGCATTTATGTTTATGCCA TATCTGAATTTTTCCGATCCGCTGATGGTTTATCTTATCGGTTTAGTCTTGCTGACATTGCCGTTTGCTTGGTGGGTATT TAGGCCTATTAAGCATTATAAAACCGATGTGAAACAGAAGATTTATCCACTTATTTTTAAGTACTTTGGTCATGATTTTA TCTTTTGCAAAGAGCATAAGATGAGCCTTAGTGCGCTGAAGGCATCCAAGTTGCTACCTTATTATGAATCTGCGAGCTTT GACGATTATGTGCAGGGTACCTACAAAAATATTGAGATCGCTATCAATGAGTTGCAGCTAACTAAACAGGTTAAGCGTGA CAAGTCGACCGACACGGTTACCGTCTTTAAAGGGGTGATGATTGAGCTCAGTAGCCATAAAGATTTTCGTGGCCATACCG TGGTGGTGAAGAACCGCGGAGGCTTGGTTAATTTCCTCTCGGACTCCTTTAAAGGCCTTGAACGGGTGAAGCTGGAGGAT CCTATCTTTGAGAAGCAGTTTGATGTGTTCTCGACCGATCAAATAGAGGCGCGTTATCTGTTAACTGTGACTTTTATGGA GCGCTTGCAGGAGCTATCTGCCAGTTTTGGCAACAAGATCCAATGTGCTTTCTATCGCAATAAATTACTGATCATGCTTG GTAGTAAAGAGAATCGCTTCGAGATGGCGTCGATATTTAAGGCGGCAACATTCGAATATGAATTTAGTCAGATAAACAAA GAGATGAAGCAGTTATTTGCTATCGTTGATGTACTGCAATTGGATAGTTCGACCGGATTATGA
Upstream 100 bases:
>100_bases TTATCTAAAATAGCTTAAATGTATTCGCTCAATTACCGTAATACTGATTATTGCGGTAATGACTCGTTACTAAACTGCAC TTGAGTGAGTTAGCAATAAT
Downstream 100 bases:
>100_bases TGAAGCGAGCACCCCTGTTTAGTTTACTGTGCTTGTCTACTGCTGTGACTTCTGCAGTTGTAACTCCTACAGCCATGGCG GCAGAGACGAGTAAGCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MNLFSFLFGASIKPIRNTDHLVAAPSEIDEFKQYYQQHLEPLTSKFENARVASLKACRQRLYLCAAIYIGIAILAFMFMP YLNFSDPLMVYLIGLVLLTLPFAWWVFRPIKHYKTDVKQKIYPLIFKYFGHDFIFCKEHKMSLSALKASKLLPYYESASF DDYVQGTYKNIEIAINELQLTKQVKRDKSTDTVTVFKGVMIELSSHKDFRGHTVVVKNRGGLVNFLSDSFKGLERVKLED PIFEKQFDVFSTDQIEARYLLTVTFMERLQELSASFGNKIQCAFYRNKLLIMLGSKENRFEMASIFKAATFEYEFSQINK EMKQLFAIVDVLQLDSSTGL
Sequences:
>Translated_340_residues MNLFSFLFGASIKPIRNTDHLVAAPSEIDEFKQYYQQHLEPLTSKFENARVASLKACRQRLYLCAAIYIGIAILAFMFMP YLNFSDPLMVYLIGLVLLTLPFAWWVFRPIKHYKTDVKQKIYPLIFKYFGHDFIFCKEHKMSLSALKASKLLPYYESASF DDYVQGTYKNIEIAINELQLTKQVKRDKSTDTVTVFKGVMIELSSHKDFRGHTVVVKNRGGLVNFLSDSFKGLERVKLED PIFEKQFDVFSTDQIEARYLLTVTFMERLQELSASFGNKIQCAFYRNKLLIMLGSKENRFEMASIFKAATFEYEFSQINK EMKQLFAIVDVLQLDSSTGL >Mature_340_residues MNLFSFLFGASIKPIRNTDHLVAAPSEIDEFKQYYQQHLEPLTSKFENARVASLKACRQRLYLCAAIYIGIAILAFMFMP YLNFSDPLMVYLIGLVLLTLPFAWWVFRPIKHYKTDVKQKIYPLIFKYFGHDFIFCKEHKMSLSALKASKLLPYYESASF DDYVQGTYKNIEIAINELQLTKQVKRDKSTDTVTVFKGVMIELSSHKDFRGHTVVVKNRGGLVNFLSDSFKGLERVKLED PIFEKQFDVFSTDQIEARYLLTVTFMERLQELSASFGNKIQCAFYRNKLLIMLGSKENRFEMASIFKAATFEYEFSQINK EMKQLFAIVDVLQLDSSTGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39445; Mature: 39445
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFSFLFGASIKPIRNTDHLVAAPSEIDEFKQYYQQHLEPLTSKFENARVASLKACRQR CCHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LYLCAAIYIGIAILAFMFMPYLNFSDPLMVYLIGLVLLTLPFAWWVFRPIKHYKTDVKQK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYPLIFKYFGHDFIFCKEHKMSLSALKASKLLPYYESASFDDYVQGTYKNIEIAINELQL HHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHEEEHHHHHH TKQVKRDKSTDTVTVFKGVMIELSSHKDFRGHTVVVKNRGGLVNFLSDSFKGLERVKLED HHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC PIFEKQFDVFSTDQIEARYLLTVTFMERLQELSASFGNKIQCAFYRNKLLIMLGSKENRF CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECEEEEEECCCCCHH EMASIFKAATFEYEFSQINKEMKQLFAIVDVLQLDSSTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNLFSFLFGASIKPIRNTDHLVAAPSEIDEFKQYYQQHLEPLTSKFENARVASLKACRQR CCHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LYLCAAIYIGIAILAFMFMPYLNFSDPLMVYLIGLVLLTLPFAWWVFRPIKHYKTDVKQK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYPLIFKYFGHDFIFCKEHKMSLSALKASKLLPYYESASFDDYVQGTYKNIEIAINELQL HHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHEEEHHHHHH TKQVKRDKSTDTVTVFKGVMIELSSHKDFRGHTVVVKNRGGLVNFLSDSFKGLERVKLED HHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC PIFEKQFDVFSTDQIEARYLLTVTFMERLQELSASFGNKIQCAFYRNKLLIMLGSKENRF CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECEEEEEECCCCCHH EMASIFKAATFEYEFSQINKEMKQLFAIVDVLQLDSSTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA