Click here to switch to the map view.

The map label for this gene is lemA [H]

Identifier: 157963867

GI number: 157963867

Start: 4927424

End: 4927993

Strand: Reverse

Name: lemA [H]

Synonym: Spea_4056

Alternate gene names: 157963867

Gene position: 4927993-4927424 (Counterclockwise)

Preceding gene: 157963871

Following gene: 157963866

Centisome position: 95.23

GC content: 46.67

Gene sequence:

>570_bases
ATGGAAGGGTTATTGTTGGGATCAGGCTTAGTGGTGATTATTGCCTATCTTTGGTATGTCAGTTTAATCAAGAAGCGTAA
TGCGGGGCGTGAAGCGTTATCGGGAATAGACGTTCAGCTTAAGAAGCGGTCTAACCTAGTACCGAATATCCTCAAGATTG
CACAGAAGTACATGGACCATGAGAAGTCGCTGCTGACCGAGATCACCGAATTAAGAACTTTGGCTGTTAAGGGGTATGAC
GATGGTGACTCAGGTTCAGTTAAAGCTCATCTTCAGGTATCAGAAAAACTGAATCAGAAGATGTCACAGCTGATGGTAAG
TGTTGAAAACTATCCTGAGCTGAAGTCAGACAATACCATGCTGCAAGCGATGCAGACCTACAACGAAGTCGAGGCTCAGC
TGTCTGCTGCGCGTCGTTTCTACAACTCGGCAGTATCTGAGCTGAATACCGCGGTTGAGATCTTCCCTGGCTCTATCATA
GCCTCTATGGCGAGTGTGAAGGTGATGCCTTTCTATGAAGCCGACGAGGCGTCTAAAGCACCTGTCGATGCTGCCGATTA
TCTAAAATAG

Upstream 100 bases:

>100_bases
TATGAGTTATATAAGAATAGCGTAATCGTTTTTTGGCTTTAGTCTACTGGATAGAGACTAGCGCTAGCCATTTAAATAAA
AAGAACAATAGGACACACAG

Downstream 100 bases:

>100_bases
CTTAAATGTATTCGCTCAATTACCGTAATACTGATTATTGCGGTAATGACTCGTTACTAAACTGCACTTGAGTGAGTTAG
CAATAATATGAATCTATTTA

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MEGLLLGSGLVVIIAYLWYVSLIKKRNAGREALSGIDVQLKKRSNLVPNILKIAQKYMDHEKSLLTEITELRTLAVKGYD
DGDSGSVKAHLQVSEKLNQKMSQLMVSVENYPELKSDNTMLQAMQTYNEVEAQLSAARRFYNSAVSELNTAVEIFPGSII
ASMASVKVMPFYEADEASKAPVDAADYLK

Sequences:

>Translated_189_residues
MEGLLLGSGLVVIIAYLWYVSLIKKRNAGREALSGIDVQLKKRSNLVPNILKIAQKYMDHEKSLLTEITELRTLAVKGYD
DGDSGSVKAHLQVSEKLNQKMSQLMVSVENYPELKSDNTMLQAMQTYNEVEAQLSAARRFYNSAVSELNTAVEIFPGSII
ASMASVKVMPFYEADEASKAPVDAADYLK
>Mature_189_residues
MEGLLLGSGLVVIIAYLWYVSLIKKRNAGREALSGIDVQLKKRSNLVPNILKIAQKYMDHEKSLLTEITELRTLAVKGYD
DGDSGSVKAHLQVSEKLNQKMSQLMVSVENYPELKSDNTMLQAMQTYNEVEAQLSAARRFYNSAVSELNTAVEIFPGSII
ASMASVKVMPFYEADEASKAPVDAADYLK

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 20924; Mature: 20924

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGLLLGSGLVVIIAYLWYVSLIKKRNAGREALSGIDVQLKKRSNLVPNILKIAQKYMDH
CCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEHHHCCCCHHHHHHHHHHHHH
EKSLLTEITELRTLAVKGYDDGDSGSVKAHLQVSEKLNQKMSQLMVSVENYPELKSDNTM
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LQAMQTYNEVEAQLSAARRFYNSAVSELNTAVEIFPGSIIASMASVKVMPFYEADEASKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCCCCC
PVDAADYLK
CCCHHHCCC
>Mature Secondary Structure
MEGLLLGSGLVVIIAYLWYVSLIKKRNAGREALSGIDVQLKKRSNLVPNILKIAQKYMDH
CCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEHHHCCCCHHHHHHHHHHHHH
EKSLLTEITELRTLAVKGYDDGDSGSVKAHLQVSEKLNQKMSQLMVSVENYPELKSDNTM
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LQAMQTYNEVEAQLSAARRFYNSAVSELNTAVEIFPGSIIASMASVKVMPFYEADEASKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCCCCCCC
PVDAADYLK
CCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]