Click here to switch to the map view.

The map label for this gene is tar [C]

Identifier: 157963830

GI number: 157963830

Start: 4881979

End: 4883919

Strand: Direct

Name: tar [C]

Synonym: Spea_4019

Alternate gene names: 157963830

Gene position: 4881979-4883919 (Clockwise)

Preceding gene: 157963829

Following gene: 157963834

Centisome position: 94.35

GC content: 46.37

Gene sequence:

>1941_bases
ATGAAAATCTCAACGCTCTCCCTTTCAGCCTCAATTACACTGTTACTCATTGCGGCGTTACTGGCTTCGGTGGTGCTGTG
GAGCAACGACAAACGCCAACTCATCGAACAACAGACCTTGCAACTGCAACAGATCCAACAGAGTTTTTTAGTCGAGATAA
GACGTGAACTCGATAGCTATTTATCTAGCGGAGACAGCAATAAGCTTAACAGCGCTAAAGTTAAACTTGAGCATATGCAG
ACGCAAATCGCTTCACTAAACGACCTAAAAACCACACAACTACAGCAAGTTGTAATAGCCTTTACCCAAGCCTTAGATAG
TGATTACCGGGCTGCGGGGAAGTTAGCAGGCAACCCAAGACAGCTATTAGCCCACGCCGAATCAGAGATGCTTGATTACA
ATGCACGCTTAGCGGATTACGCCATCATAGGATTAGACGAACATCCGGCACTCGCCAATGAATACTTAAAGCTAACCCGG
GGTTTACCGCCGCTAATCTATAACTTGTCGCAGATCAGTGAGAGTTACCTTGTCGGCAAAGAAGATCGACTCAAGTCGAT
ATTAAAGAGCCAAGTCACCGAACTAAATGAGTGGAATGCTCGGCTCAATTCTCTCGCGTTAATCGGAGTTTATGAGGTAC
TTGAAACGGACGAGTTTACCCTTGGCGAAGATGAACCAGAAACCATAGAAATAGGAGAAGATGCGAGAGCCGAACTCCTT
AGCCTGAGTAAACGCTACAGTAAAGAGATCGATAACACTCACGCCTTAATGATTGATAATCAACAATCACAACAATCATT
AATTCAAGATATTAGCGTTATAGAGCAACAGTTATTAGCGCTAGGCATTCAACAGCAAGAGCAGAATGTGATCCTGAAAC
AAGAACTGATGTTTGCCATCTATACCATGGTCTCCATCTTGATTATTTTTGCCGCCAGTTACCTCATTTTATTGCAGCGC
CGGGTAGTTAATCCGCTAAAACAACTCAGCAACGCATTCCACAAGCTCACCGAATCAAATAGTCGCGAACGCATCCCTAT
TCTCAGGCGCTGTGAAACGGGACAAATAGCCGCTTATTTTAATCAGTTACTCAATCGCTTTGAAAGTGAAGATGAGTTAC
AACGACAACAGATGACACAAGTCTCTGATTCGCTAACTCAACTGGTTAATCGCATTGATCATATTTCGGCAAGCACAGAG
CAAACTCAACAAGTCGTCCTAACGGCACAGCAGCAGACCGAACACATTCGTTCCTTAGCCAAAGAGGTGTGTGACACCTC
AGAGAAAGTTGAACACAGTGCTCTACAAACGCAACTGCAGATGCAACAAAGCCAACAAGAGGCACAGGCTGTACTCGATG
CTACCGACGAGACCCGCTCTGCCGTAGACCATTGTCATCAAGCCTTAACTAGCCTATCGATTTCGGTTGCCGATGTGTCG
CAAATCATCGATGTTATCGGCAATATTGCCGCGCAAACAAATCTGCTAGCACTAAACGCTGCTATCGAAGCCGCCAGAGC
AGGGAAGCAGGGCCGCGGATTTGCCGTCGTGGCTGAAGAGGTGCGTAACCTATCTCAACGCACTCAAATATCGCTGCAAG
AAATAATGGACATACTCAAGCAACTCACTCAAGCCAACGGCGATTTGGGTTCTAGAGTGGAAGGGATTAAGGATGCCACC
GAAGTACAGAGATCTCGTGCAAATAGCCTGTGGCAAGTCGCCCAAAGTGTACAAACACAAGCCAGTGAAATGGCCATTAC
CGCCCAACAAGGCGCCCGGCATACTCAACAGCAAGTCCGTCATTTAGATGACTTTGCCAACGCAATGATAAGCCTGAAAA
ATCACGCCAAGGCAGCATCAGAGCAATCTGGCGTTATCGCCGCGGAGGTTCAGCAGAGTGTTGAAAATATCGGTAACAGC
TTAGGGGTCAAGGTTGTTTAG

Upstream 100 bases:

>100_bases
ATCGATTTTGTTCAAGTCATTTAAAATAAAGACTAATCTGTAATTTATTTGTAACGAAAAAGCCATATTCTAGCGCCATC
TCAAGTATTTGGCATTCAAG

Downstream 100 bases:

>100_bases
GCAACGGTAGTGGGCTTTACTGCCTTCAATGAATCATAAGTGACGCAATAATATAGTGCCGGCAACTTATAAGCCTCTCA
AAATCTAAAGCCTCAACACT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MKISTLSLSASITLLLIAALLASVVLWSNDKRQLIEQQTLQLQQIQQSFLVEIRRELDSYLSSGDSNKLNSAKVKLEHMQ
TQIASLNDLKTTQLQQVVIAFTQALDSDYRAAGKLAGNPRQLLAHAESEMLDYNARLADYAIIGLDEHPALANEYLKLTR
GLPPLIYNLSQISESYLVGKEDRLKSILKSQVTELNEWNARLNSLALIGVYEVLETDEFTLGEDEPETIEIGEDARAELL
SLSKRYSKEIDNTHALMIDNQQSQQSLIQDISVIEQQLLALGIQQQEQNVILKQELMFAIYTMVSILIIFAASYLILLQR
RVVNPLKQLSNAFHKLTESNSRERIPILRRCETGQIAAYFNQLLNRFESEDELQRQQMTQVSDSLTQLVNRIDHISASTE
QTQQVVLTAQQQTEHIRSLAKEVCDTSEKVEHSALQTQLQMQQSQQEAQAVLDATDETRSAVDHCHQALTSLSISVADVS
QIIDVIGNIAAQTNLLALNAAIEAARAGKQGRGFAVVAEEVRNLSQRTQISLQEIMDILKQLTQANGDLGSRVEGIKDAT
EVQRSRANSLWQVAQSVQTQASEMAITAQQGARHTQQQVRHLDDFANAMISLKNHAKAASEQSGVIAAEVQQSVENIGNS
LGVKVV

Sequences:

>Translated_646_residues
MKISTLSLSASITLLLIAALLASVVLWSNDKRQLIEQQTLQLQQIQQSFLVEIRRELDSYLSSGDSNKLNSAKVKLEHMQ
TQIASLNDLKTTQLQQVVIAFTQALDSDYRAAGKLAGNPRQLLAHAESEMLDYNARLADYAIIGLDEHPALANEYLKLTR
GLPPLIYNLSQISESYLVGKEDRLKSILKSQVTELNEWNARLNSLALIGVYEVLETDEFTLGEDEPETIEIGEDARAELL
SLSKRYSKEIDNTHALMIDNQQSQQSLIQDISVIEQQLLALGIQQQEQNVILKQELMFAIYTMVSILIIFAASYLILLQR
RVVNPLKQLSNAFHKLTESNSRERIPILRRCETGQIAAYFNQLLNRFESEDELQRQQMTQVSDSLTQLVNRIDHISASTE
QTQQVVLTAQQQTEHIRSLAKEVCDTSEKVEHSALQTQLQMQQSQQEAQAVLDATDETRSAVDHCHQALTSLSISVADVS
QIIDVIGNIAAQTNLLALNAAIEAARAGKQGRGFAVVAEEVRNLSQRTQISLQEIMDILKQLTQANGDLGSRVEGIKDAT
EVQRSRANSLWQVAQSVQTQASEMAITAQQGARHTQQQVRHLDDFANAMISLKNHAKAASEQSGVIAAEVQQSVENIGNS
LGVKVV
>Mature_646_residues
MKISTLSLSASITLLLIAALLASVVLWSNDKRQLIEQQTLQLQQIQQSFLVEIRRELDSYLSSGDSNKLNSAKVKLEHMQ
TQIASLNDLKTTQLQQVVIAFTQALDSDYRAAGKLAGNPRQLLAHAESEMLDYNARLADYAIIGLDEHPALANEYLKLTR
GLPPLIYNLSQISESYLVGKEDRLKSILKSQVTELNEWNARLNSLALIGVYEVLETDEFTLGEDEPETIEIGEDARAELL
SLSKRYSKEIDNTHALMIDNQQSQQSLIQDISVIEQQLLALGIQQQEQNVILKQELMFAIYTMVSILIIFAASYLILLQR
RVVNPLKQLSNAFHKLTESNSRERIPILRRCETGQIAAYFNQLLNRFESEDELQRQQMTQVSDSLTQLVNRIDHISASTE
QTQQVVLTAQQQTEHIRSLAKEVCDTSEKVEHSALQTQLQMQQSQQEAQAVLDATDETRSAVDHCHQALTSLSISVADVS
QIIDVIGNIAAQTNLLALNAAIEAARAGKQGRGFAVVAEEVRNLSQRTQISLQEIMDILKQLTQANGDLGSRVEGIKDAT
EVQRSRANSLWQVAQSVQTQASEMAITAQQGARHTQQQVRHLDDFANAMISLKNHAKAASEQSGVIAAEVQQSVENIGNS
LGVKVV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=218, Percent_Identity=32.1100917431193, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI2367378, Length=255, Percent_Identity=27.843137254902, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1787690, Length=255, Percent_Identity=28.2352941176471, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1788194, Length=244, Percent_Identity=29.5081967213115, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1789453, Length=256, Percent_Identity=26.5625, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 71848; Mature: 71848

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISTLSLSASITLLLIAALLASVVLWSNDKRQLIEQQTLQLQQIQQSFLVEIRRELDSY
CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSSGDSNKLNSAKVKLEHMQTQIASLNDLKTTQLQQVVIAFTQALDSDYRAAGKLAGNPR
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHH
QLLAHAESEMLDYNARLADYAIIGLDEHPALANEYLKLTRGLPPLIYNLSQISESYLVGK
HHHHHHHHHHHHHCCHHHHEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
EDRLKSILKSQVTELNEWNARLNSLALIGVYEVLETDEFTLGEDEPETIEIGEDARAELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHH
SLSKRYSKEIDNTHALMIDNQQSQQSLIQDISVIEQQLLALGIQQQEQNVILKQELMFAI
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YTMVSILIIFAASYLILLQRRVVNPLKQLSNAFHKLTESNSRERIPILRRCETGQIAAYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHH
NQLLNRFESEDELQRQQMTQVSDSLTQLVNRIDHISASTEQTQQVVLTAQQQTEHIRSLA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KEVCDTSEKVEHSALQTQLQMQQSQQEAQAVLDATDETRSAVDHCHQALTSLSISVADVS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QIIDVIGNIAAQTNLLALNAAIEAARAGKQGRGFAVVAEEVRNLSQRTQISLQEIMDILK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLTQANGDLGSRVEGIKDATEVQRSRANSLWQVAQSVQTQASEMAITAQQGARHTQQQVR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLDDFANAMISLKNHAKAASEQSGVIAAEVQQSVENIGNSLGVKVV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHCCCCCC
>Mature Secondary Structure
MKISTLSLSASITLLLIAALLASVVLWSNDKRQLIEQQTLQLQQIQQSFLVEIRRELDSY
CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSSGDSNKLNSAKVKLEHMQTQIASLNDLKTTQLQQVVIAFTQALDSDYRAAGKLAGNPR
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCHH
QLLAHAESEMLDYNARLADYAIIGLDEHPALANEYLKLTRGLPPLIYNLSQISESYLVGK
HHHHHHHHHHHHHCCHHHHEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
EDRLKSILKSQVTELNEWNARLNSLALIGVYEVLETDEFTLGEDEPETIEIGEDARAELL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHH
SLSKRYSKEIDNTHALMIDNQQSQQSLIQDISVIEQQLLALGIQQQEQNVILKQELMFAI
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YTMVSILIIFAASYLILLQRRVVNPLKQLSNAFHKLTESNSRERIPILRRCETGQIAAYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHH
NQLLNRFESEDELQRQQMTQVSDSLTQLVNRIDHISASTEQTQQVVLTAQQQTEHIRSLA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KEVCDTSEKVEHSALQTQLQMQQSQQEAQAVLDATDETRSAVDHCHQALTSLSISVADVS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
QIIDVIGNIAAQTNLLALNAAIEAARAGKQGRGFAVVAEEVRNLSQRTQISLQEIMDILK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLTQANGDLGSRVEGIKDATEVQRSRANSLWQVAQSVQTQASEMAITAQQGARHTQQQVR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLDDFANAMISLKNHAKAASEQSGVIAAEVQQSVENIGNSLGVKVV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA