| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963814
Identifier: 157963814
GI number: 157963814
Start: 4863801
End: 4864727
Strand: Direct
Name: 157963814
Synonym: Spea_4003
Alternate gene names: NA
Gene position: 4863801-4864727 (Clockwise)
Preceding gene: 157963813
Following gene: 157963815
Centisome position: 93.99
GC content: 44.44
Gene sequence:
>927_bases ATGACTCCAGTCCCTAACGCCACTAGCAGTAAAAAAACGACCAATACAGAGAACAGAACCCGTCGACCTAAGAATTGGCT CATAGGAACTGATGTCTCTCCTTTCACCATAATAAACAGGGCGCGGCCTAGATTAAACAGTATGAATAGCAGTAGCAGCA CTAGGACCAATTTAAAGATTAACAAAACAGACATGGGCTCTCCTCGTGTTAAGATGAATCTTGCTTGGTTATTTATTGTG CTTCTTACTGTGATAGTGTTTTCAGTTTTGGTCAAGTTAGGTTTTTGGCAACTTGAACGCGCCCATTTTAAGGCTAACTG GCAACAACAGCTGAGCGAAAGACAAGCCGCCTCTGTACTCAGCTATCCTCAGTTACTCAATATTTCTAAAGATGAAGCCT TAACTGGTTTTAAACTCAAAACTTCAGTGAGCCCAGTCTCGACAGATATCTTTCTGCTCGATAATCAGGTTTATCAGGGA AGAGTGGGCTACCTTGCTCTACAAGCTGTGCAAGTGAGTGAGCTAGAGCCTTGGTTACTGGTCGAACTCGGCTTTATCCC CGCAGGGCTCAGCCGCTCACAACTACCCAATGTAAAACCCATTAGTCAGCCAAGCGTTTTAGAGGGCCGCGTTTATCAAA AGCAGATAAACCCAATGAGCTCAGAATTAATGGCCGAAACCGCTTGGCCCAAACGCATCCAAAACCTCAATATTCCCCAG ATAGCTCAATTGATTGATAAGCCTTTAGCCAGTGTAGTCTTACAGCCAAGTAACCTCGACAACACATACCCTCACCCGTG GCAGCCTATTCCACTCTCTTCACAGAAGCATCAAGGTTATGCCGTACAATGGTTTTCAATGGCGGGCGTGTTTGCATTGC TAATGGGATATCTGTTGTTTCGTAAACTAAAACAGCCTGATAGATAA
Upstream 100 bases:
>100_bases GCACTTTGTTGATGTGGTGTGGCTGTGTCTATTTATCTTTGTGTATGTACTTTAATCCAAGATAGAACTTAACCATTAAT AGGGCCTGGAGTTAGGAGCA
Downstream 100 bases:
>100_bases CAAGGTCATTAGCCTATTGCCAATGACAGATAGACACTGTAGGTTAGAAATTAAGCGACCTAGCCGTTCCGGGAAGCTCA ATTCTGATCAATTATTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTPVPNATSSKKTTNTENRTRRPKNWLIGTDVSPFTIINRARPRLNSMNSSSSTRTNLKINKTDMGSPRVKMNLAWLFIV LLTVIVFSVLVKLGFWQLERAHFKANWQQQLSERQAASVLSYPQLLNISKDEALTGFKLKTSVSPVSTDIFLLDNQVYQG RVGYLALQAVQVSELEPWLLVELGFIPAGLSRSQLPNVKPISQPSVLEGRVYQKQINPMSSELMAETAWPKRIQNLNIPQ IAQLIDKPLASVVLQPSNLDNTYPHPWQPIPLSSQKHQGYAVQWFSMAGVFALLMGYLLFRKLKQPDR
Sequences:
>Translated_308_residues MTPVPNATSSKKTTNTENRTRRPKNWLIGTDVSPFTIINRARPRLNSMNSSSSTRTNLKINKTDMGSPRVKMNLAWLFIV LLTVIVFSVLVKLGFWQLERAHFKANWQQQLSERQAASVLSYPQLLNISKDEALTGFKLKTSVSPVSTDIFLLDNQVYQG RVGYLALQAVQVSELEPWLLVELGFIPAGLSRSQLPNVKPISQPSVLEGRVYQKQINPMSSELMAETAWPKRIQNLNIPQ IAQLIDKPLASVVLQPSNLDNTYPHPWQPIPLSSQKHQGYAVQWFSMAGVFALLMGYLLFRKLKQPDR >Mature_307_residues TPVPNATSSKKTTNTENRTRRPKNWLIGTDVSPFTIINRARPRLNSMNSSSSTRTNLKINKTDMGSPRVKMNLAWLFIVL LTVIVFSVLVKLGFWQLERAHFKANWQQQLSERQAASVLSYPQLLNISKDEALTGFKLKTSVSPVSTDIFLLDNQVYQGR VGYLALQAVQVSELEPWLLVELGFIPAGLSRSQLPNVKPISQPSVLEGRVYQKQINPMSSELMAETAWPKRIQNLNIPQI AQLIDKPLASVVLQPSNLDNTYPHPWQPIPLSSQKHQGYAVQWFSMAGVFALLMGYLLFRKLKQPDR
Specific function: Unknown
COG id: COG3346
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34809; Mature: 34678
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: PS50895 SURF1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVPNATSSKKTTNTENRTRRPKNWLIGTDVSPFTIINRARPRLNSMNSSSSTRTNLKI CCCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCHHHHHHCCCHHHCCCCCCCCEEEEEE NKTDMGSPRVKMNLAWLFIVLLTVIVFSVLVKLGFWQLERAHFKANWQQQLSERQAASVL ECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SYPQLLNISKDEALTGFKLKTSVSPVSTDIFLLDNQVYQGRVGYLALQAVQVSELEPWLL CCHHHHCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHCCCCCEEEEEEEHHCCCCCEEE VELGFIPAGLSRSQLPNVKPISQPSVLEGRVYQKQINPMSSELMAETAWPKRIQNLNIPQ EEECCCCCCCCHHHCCCCCCCCCCCHHHCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHH IAQLIDKPLASVVLQPSNLDNTYPHPWQPIPLSSQKHQGYAVQWFSMAGVFALLMGYLLF HHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH RKLKQPDR HHHCCCCC >Mature Secondary Structure TPVPNATSSKKTTNTENRTRRPKNWLIGTDVSPFTIINRARPRLNSMNSSSSTRTNLKI CCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCHHHHHHCCCHHHCCCCCCCCEEEEEE NKTDMGSPRVKMNLAWLFIVLLTVIVFSVLVKLGFWQLERAHFKANWQQQLSERQAASVL ECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SYPQLLNISKDEALTGFKLKTSVSPVSTDIFLLDNQVYQGRVGYLALQAVQVSELEPWLL CCHHHHCCCCCCCCCCEEEECCCCCCCEEEEEECCCHHCCCCCEEEEEEEHHCCCCCEEE VELGFIPAGLSRSQLPNVKPISQPSVLEGRVYQKQINPMSSELMAETAWPKRIQNLNIPQ EEECCCCCCCCHHHCCCCCCCCCCCHHHCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHH IAQLIDKPLASVVLQPSNLDNTYPHPWQPIPLSSQKHQGYAVQWFSMAGVFALLMGYLLF HHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHH RKLKQPDR HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA