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The map label for this gene is ybeQ [C]

Identifier: 157963771

GI number: 157963771

Start: 4814948

End: 4816369

Strand: Reverse

Name: ybeQ [C]

Synonym: Spea_3960

Alternate gene names: 157963771

Gene position: 4816369-4814948 (Counterclockwise)

Preceding gene: 157963772

Following gene: 157963770

Centisome position: 93.08

GC content: 49.72

Gene sequence:

>1422_bases
TTGTTGAACGATATTGAGTTCGTCAATCTGTTCTCAGCTGAATTAGGTGAGGATTATCGCAAGGCCAAAAGTTATGTAAA
AGATGTACCGACTCAGGCACTGCTACATGTACGCAGTTTTAGTCATAAGCTCACGAGTTTGCTGGCTGAGCCTAAGAAGA
TCCGTTTCGAAAGCCCTAACCTATATGACCGAATCGAGCAGCTTAATCAGCATCGACTCATCAACGTTAAAACCACCCGC
GCACTACACAAGCTCAGAGCCGACGGTAACCGTGGCGCTCATCCTGAAAAGTATCACCTCACCCCCGAGCAGCTACAGCA
GTTAAGTGAGCGTTCGATTAAACAGCTTTTATCTTTGGTGGAGTCGCTGTTTGTTAGTGTGAGCAAGCAAGATAAGCCTG
AATATTACTTTGAAGATTTTGACTCGTTAGCGGGGCGAGACCTGTGCTATCGCGCCGTCATGGATCGCGACCCCGAGTCG
CAGTATTTGGTGGGGATGTCATTAAAAACCCGAGCTCTGATGCAGCGTGAGCAGGAACACGCACTGCAGGGCAGTGGTGA
TGAGGCGGTAGAAGAGCGCTCGACGGCTTCATTGAAGCAGGCCAGCTATTGGTTTGCTCAGGCATCGATCAAAGATCTAA
ACGCTTTGTTCGAGCACGGGGTATCTTTGATCCACGGTTACAGCGGAGAGACCGACGTAATCGCAGGAGAGCTTGCAATT
GCTAAGGCTGCCGAAGCGGGCATTGCTAATGCGATGGCGCTATTAGGTTATTTCTATCTGGTGGGCAGTGAGCAGTTTGA
AGCTGACTCGAGTTTGGCGCAGCAATACCTCAGCGAAGCGGCTAAGTTAGAGCAATCGGAGGCAATGGCTAATTTAGGGG
TGCTCTATTACCAGCAGGGTGAGCTAGAAAGCGCCTATAAGTATATTCATCGAGCGGCTCAGGCTGGATTCCCTCACGCT
CAATATCATTTAGCCTTGATGCTGGCACGTGGCGAAGGCTGTGAGCAAGACAGCATTAAGAGTGCTTATTGGATGGCTGA
GGCCGCTGAGCAGGGGCAGGTGGATGCTATGTTTTCCTGTGCGCAGGGGATGCTGCATGATGACAGCGCCATTGGGCAAG
ACTTGTCACAAGCAGAAGCCTATCTGCGAGAGGTGATTAAGTATGGTCATAGCGTACCGGCAATGATTGAACTCAGTATT
GCACTCGCCGATGGCATCTTAGGGCGCATCGATGTGGTGTCTGCCGCAGCGTTACTTAAAATGGCGAGAGAGCGAGCCAA
TCAAACTGAGCTGGATGTGATTTTGCCGCTATGGAGTTCATTGGCGCAGCAAGTTGATGCCGTTTTAGCCGTTACCAATT
CAAAACAAGAGCTTTTATCATTAAACAAAGCGGCAGAGTTGTTATCTGAGCCCGAAGATTAA

Upstream 100 bases:

>100_bases
TTGTTCTCTGGGATTGCAGCGACTTACTTTGTGTAATAGCTGCAATGCCTAGCCTGTTATCTGAAAAGCTTAGGGTTATT
CTTGATTAGGGGTAAATGTC

Downstream 100 bases:

>100_bases
GGGCGTAGAGTCATCAATCGATGGATTGATGACTCATTTTACAAGTAAACTCCGCTAGCAAGGCTGATGCCTCAGGAATA
AGTATGCACTATAACAGCTA

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: SecC Motif-Containing Protein; Sel1-Like Repeat Protein; Sel1 Domain Protein Repeat-Containing Protein

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MLNDIEFVNLFSAELGEDYRKAKSYVKDVPTQALLHVRSFSHKLTSLLAEPKKIRFESPNLYDRIEQLNQHRLINVKTTR
ALHKLRADGNRGAHPEKYHLTPEQLQQLSERSIKQLLSLVESLFVSVSKQDKPEYYFEDFDSLAGRDLCYRAVMDRDPES
QYLVGMSLKTRALMQREQEHALQGSGDEAVEERSTASLKQASYWFAQASIKDLNALFEHGVSLIHGYSGETDVIAGELAI
AKAAEAGIANAMALLGYFYLVGSEQFEADSSLAQQYLSEAAKLEQSEAMANLGVLYYQQGELESAYKYIHRAAQAGFPHA
QYHLALMLARGEGCEQDSIKSAYWMAEAAEQGQVDAMFSCAQGMLHDDSAIGQDLSQAEAYLREVIKYGHSVPAMIELSI
ALADGILGRIDVVSAAALLKMARERANQTELDVILPLWSSLAQQVDAVLAVTNSKQELLSLNKAAELLSEPED

Sequences:

>Translated_473_residues
MLNDIEFVNLFSAELGEDYRKAKSYVKDVPTQALLHVRSFSHKLTSLLAEPKKIRFESPNLYDRIEQLNQHRLINVKTTR
ALHKLRADGNRGAHPEKYHLTPEQLQQLSERSIKQLLSLVESLFVSVSKQDKPEYYFEDFDSLAGRDLCYRAVMDRDPES
QYLVGMSLKTRALMQREQEHALQGSGDEAVEERSTASLKQASYWFAQASIKDLNALFEHGVSLIHGYSGETDVIAGELAI
AKAAEAGIANAMALLGYFYLVGSEQFEADSSLAQQYLSEAAKLEQSEAMANLGVLYYQQGELESAYKYIHRAAQAGFPHA
QYHLALMLARGEGCEQDSIKSAYWMAEAAEQGQVDAMFSCAQGMLHDDSAIGQDLSQAEAYLREVIKYGHSVPAMIELSI
ALADGILGRIDVVSAAALLKMARERANQTELDVILPLWSSLAQQVDAVLAVTNSKQELLSLNKAAELLSEPED
>Mature_473_residues
MLNDIEFVNLFSAELGEDYRKAKSYVKDVPTQALLHVRSFSHKLTSLLAEPKKIRFESPNLYDRIEQLNQHRLINVKTTR
ALHKLRADGNRGAHPEKYHLTPEQLQQLSERSIKQLLSLVESLFVSVSKQDKPEYYFEDFDSLAGRDLCYRAVMDRDPES
QYLVGMSLKTRALMQREQEHALQGSGDEAVEERSTASLKQASYWFAQASIKDLNALFEHGVSLIHGYSGETDVIAGELAI
AKAAEAGIANAMALLGYFYLVGSEQFEADSSLAQQYLSEAAKLEQSEAMANLGVLYYQQGELESAYKYIHRAAQAGFPHA
QYHLALMLARGEGCEQDSIKSAYWMAEAAEQGQVDAMFSCAQGMLHDDSAIGQDLSQAEAYLREVIKYGHSVPAMIELSI
ALADGILGRIDVVSAAALLKMARERANQTELDVILPLWSSLAQQVDAVLAVTNSKQELLSLNKAAELLSEPED

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI151301150, Length=231, Percent_Identity=28.1385281385281, Blast_Score=72, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52562; Mature: 52562

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNDIEFVNLFSAELGEDYRKAKSYVKDVPTQALLHVRSFSHKLTSLLAEPKKIRFESPN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
LYDRIEQLNQHRLINVKTTRALHKLRADGNRGAHPEKYHLTPEQLQQLSERSIKQLLSLV
HHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ESLFVSVSKQDKPEYYFEDFDSLAGRDLCYRAVMDRDPESQYLVGMSLKTRALMQREQEH
HHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHH
ALQGSGDEAVEERSTASLKQASYWFAQASIKDLNALFEHGVSLIHGYSGETDVIAGELAI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHH
AKAAEAGIANAMALLGYFYLVGSEQFEADSSLAQQYLSEAAKLEQSEAMANLGVLYYQQG
HHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
ELESAYKYIHRAAQAGFPHAQYHLALMLARGEGCEQDSIKSAYWMAEAAEQGQVDAMFSC
CHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
AQGMLHDDSAIGQDLSQAEAYLREVIKYGHSVPAMIELSIALADGILGRIDVVSAAALLK
HHCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MARERANQTELDVILPLWSSLAQQVDAVLAVTNSKQELLSLNKAAELLSEPED
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLNDIEFVNLFSAELGEDYRKAKSYVKDVPTQALLHVRSFSHKLTSLLAEPKKIRFESPN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
LYDRIEQLNQHRLINVKTTRALHKLRADGNRGAHPEKYHLTPEQLQQLSERSIKQLLSLV
HHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ESLFVSVSKQDKPEYYFEDFDSLAGRDLCYRAVMDRDPESQYLVGMSLKTRALMQREQEH
HHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHH
ALQGSGDEAVEERSTASLKQASYWFAQASIKDLNALFEHGVSLIHGYSGETDVIAGELAI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHH
AKAAEAGIANAMALLGYFYLVGSEQFEADSSLAQQYLSEAAKLEQSEAMANLGVLYYQQG
HHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
ELESAYKYIHRAAQAGFPHAQYHLALMLARGEGCEQDSIKSAYWMAEAAEQGQVDAMFSC
CHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
AQGMLHDDSAIGQDLSQAEAYLREVIKYGHSVPAMIELSIALADGILGRIDVVSAAALLK
HHCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MARERANQTELDVILPLWSSLAQQVDAVLAVTNSKQELLSLNKAAELLSEPED
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA