| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963770
Identifier: 157963770
GI number: 157963770
Start: 4813337
End: 4814605
Strand: Reverse
Name: 157963770
Synonym: Spea_3959
Alternate gene names: NA
Gene position: 4814605-4813337 (Counterclockwise)
Preceding gene: 157963771
Following gene: 157963767
Centisome position: 93.04
GC content: 45.23
Gene sequence:
>1269_bases TTGCCACAATTTGATACTGAACAAACTAGTGCTTCAACATTATCCGATGGCGCTCAGCAGCAAGCCCTGAATAAGTTTGC AGAACGCTATATCAAGTTAGCTTTAGCTGTCGGTCAGCATGACAGTTATTATGTCGACGCCTACTATGGTCCAAAAGATT GGCAGAAAGAAACCTATTGGCAGCCTATCCCCGATCTGTTAAATCAGCATCAAGTTGGCTCCGAGCTATTGGCGACACTA GGGCTACAGCTGACAGTGGGTGAGCTCAATGAACGTTATCAATTTTTGAAGACTCAGTGGTACTCCATCGGCGCTTACCT TAACTTTTTACAAGGTAAACAGTTGAGTTTCGATGAAGAAGCCATTGCTTTATACGATTGCCATCTTAGCCCTTACTCCT TGCTCGAACATCAACAAGTACTGGCCGAAATAGAATCTCTATTGCCGGGAGAGGGCATGCTCACCGATCGGTATAATGAG TTTAAATCGCAATTTATTGTGCCTAAAAACAAGGCTGCTGAGGTATTTAGCGCTTCGGTGGATATTGCTCGAAAACTTAC TCGCAAGCATATGGACTTACCCGAAAACGAAAGTTTTGAAATTGAATATGTTAACGATAAGGTATGGACAGCGTATAACT GGTACAAGGGCGACTCTCACAGCTTAATCCAGTTGAACCAAGATCAGCCCCTAGGCATTGAGCGTTACTTAGAGCTGGCC TCCCATGAAGGCTACCCTGGGCATCATGTATTCAATGTTTTACAAGAGCAGAAGTTGGTGAAGGCTAAGCAATGGCTAGA GTATGCCATCTATCCGTTATACAGCCCGATCTCTTATTTGTCAGAGGGCAGCGCTAACTATGCGCTGAGTCTGATCATGT CCGATGAAGAGGTGTTGGCTTTTGAGCGTGACGTGCTAATGCCGCTGGCAGGATTGAGCGGAGATCTTGCCCTGTTTCAC AAGATATTAAAGTTAGTGAAAAAGCTGGGTTATTTTGAGAACTACGTCAGCCAGTGTTTAACCGATAAGCGAGTCGATGC TGAAGCGGCGGAAAAGATGCTAATCGAAGGCGCGCTTTACCCTAACTCACGTGCGAAACAGCGCGTTAAGTTTTATGAAC GTAATCGCTCTTATGTGATTAATTATAGCGTGGGTGAAGACGCCGTAGCGGCTTGGGTCGAGGCGAAAGCTGACACAAAA GCAGAAAAATGGACGCGCTTCGAAAGCCTGTTATCTAGACCTCTAAACGCGTCGGATATGGTTATTTAA
Upstream 100 bases:
>100_bases GCTGGGTGACTAGTTAGTCAAATTACTTAATCGACACGGTTATTGTATAATGTATACTGTGTTGGTAATTTGATTATCTG CTTACTCGATAGGAGTTCTC
Downstream 100 bases:
>100_bases CTTAATTAGCTATTAGGTTAAATAGGCTCGTTAGGATTGTGTTCGAACGTACGGCCTTTGTGTGGTGCAGAGGTCGGTGC TTCTTTATAAATCGACTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MPQFDTEQTSASTLSDGAQQQALNKFAERYIKLALAVGQHDSYYVDAYYGPKDWQKETYWQPIPDLLNQHQVGSELLATL GLQLTVGELNERYQFLKTQWYSIGAYLNFLQGKQLSFDEEAIALYDCHLSPYSLLEHQQVLAEIESLLPGEGMLTDRYNE FKSQFIVPKNKAAEVFSASVDIARKLTRKHMDLPENESFEIEYVNDKVWTAYNWYKGDSHSLIQLNQDQPLGIERYLELA SHEGYPGHHVFNVLQEQKLVKAKQWLEYAIYPLYSPISYLSEGSANYALSLIMSDEEVLAFERDVLMPLAGLSGDLALFH KILKLVKKLGYFENYVSQCLTDKRVDAEAAEKMLIEGALYPNSRAKQRVKFYERNRSYVINYSVGEDAVAAWVEAKADTK AEKWTRFESLLSRPLNASDMVI
Sequences:
>Translated_422_residues MPQFDTEQTSASTLSDGAQQQALNKFAERYIKLALAVGQHDSYYVDAYYGPKDWQKETYWQPIPDLLNQHQVGSELLATL GLQLTVGELNERYQFLKTQWYSIGAYLNFLQGKQLSFDEEAIALYDCHLSPYSLLEHQQVLAEIESLLPGEGMLTDRYNE FKSQFIVPKNKAAEVFSASVDIARKLTRKHMDLPENESFEIEYVNDKVWTAYNWYKGDSHSLIQLNQDQPLGIERYLELA SHEGYPGHHVFNVLQEQKLVKAKQWLEYAIYPLYSPISYLSEGSANYALSLIMSDEEVLAFERDVLMPLAGLSGDLALFH KILKLVKKLGYFENYVSQCLTDKRVDAEAAEKMLIEGALYPNSRAKQRVKFYERNRSYVINYSVGEDAVAAWVEAKADTK AEKWTRFESLLSRPLNASDMVI >Mature_421_residues PQFDTEQTSASTLSDGAQQQALNKFAERYIKLALAVGQHDSYYVDAYYGPKDWQKETYWQPIPDLLNQHQVGSELLATLG LQLTVGELNERYQFLKTQWYSIGAYLNFLQGKQLSFDEEAIALYDCHLSPYSLLEHQQVLAEIESLLPGEGMLTDRYNEF KSQFIVPKNKAAEVFSASVDIARKLTRKHMDLPENESFEIEYVNDKVWTAYNWYKGDSHSLIQLNQDQPLGIERYLELAS HEGYPGHHVFNVLQEQKLVKAKQWLEYAIYPLYSPISYLSEGSANYALSLIMSDEEVLAFERDVLMPLAGLSGDLALFHK ILKLVKKLGYFENYVSQCLTDKRVDAEAAEKMLIEGALYPNSRAKQRVKFYERNRSYVINYSVGEDAVAAWVEAKADTKA EKWTRFESLLSRPLNASDMVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48421; Mature: 48290
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQFDTEQTSASTLSDGAQQQALNKFAERYIKLALAVGQHDSYYVDAYYGPKDWQKETYW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC QPIPDLLNQHQVGSELLATLGLQLTVGELNERYQFLKTQWYSIGAYLNFLQGKQLSFDEE CCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AIALYDCHLSPYSLLEHQQVLAEIESLLPGEGMLTDRYNEFKSQFIVPKNKAAEVFSASV EEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH DIARKLTRKHMDLPENESFEIEYVNDKVWTAYNWYKGDSHSLIQLNQDQPLGIERYLELA HHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHH SHEGYPGHHVFNVLQEQKLVKAKQWLEYAIYPLYSPISYLSEGSANYALSLIMSDEEVLA HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHH FERDVLMPLAGLSGDLALFHKILKLVKKLGYFENYVSQCLTDKRVDAEAAEKMLIEGALY HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC PNSRAKQRVKFYERNRSYVINYSVGEDAVAAWVEAKADTKAEKWTRFESLLSRPLNASDM CCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC VI CC >Mature Secondary Structure PQFDTEQTSASTLSDGAQQQALNKFAERYIKLALAVGQHDSYYVDAYYGPKDWQKETYW CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC QPIPDLLNQHQVGSELLATLGLQLTVGELNERYQFLKTQWYSIGAYLNFLQGKQLSFDEE CCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AIALYDCHLSPYSLLEHQQVLAEIESLLPGEGMLTDRYNEFKSQFIVPKNKAAEVFSASV EEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH DIARKLTRKHMDLPENESFEIEYVNDKVWTAYNWYKGDSHSLIQLNQDQPLGIERYLELA HHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHH SHEGYPGHHVFNVLQEQKLVKAKQWLEYAIYPLYSPISYLSEGSANYALSLIMSDEEVLA HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHH FERDVLMPLAGLSGDLALFHKILKLVKKLGYFENYVSQCLTDKRVDAEAAEKMLIEGALY HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC PNSRAKQRVKFYERNRSYVINYSVGEDAVAAWVEAKADTKAEKWTRFESLLSRPLNASDM CCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC VI CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA