| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yfiP [C]
Identifier: 157963765
GI number: 157963765
Start: 4808529
End: 4809200
Strand: Reverse
Name: yfiP [C]
Synonym: Spea_3954
Alternate gene names: 157963765
Gene position: 4809200-4808529 (Counterclockwise)
Preceding gene: 157963767
Following gene: 157963763
Centisome position: 92.94
GC content: 46.88
Gene sequence:
>672_bases ATGTCGAGTTATCGTGTAATTTGTATCAACACTCGGCTACAATTTGCAGGCTATTTTAAACAATTACCCAGAGGTCTCGT GTCCCGTCCAACTTGTCCCAACTGCCACTATCCGCAAAATGCCTGTTTGTGTGCCAGTATCGAACTTATGCAAGTCACGC CTGAGCTGATAATTTTGCAAGATCCCAGTGAAGTAGGGCATGCGAAGAATAGTGTGCGCCTGCTAGAGCTGGTTATCGCT GAAACTCAAGTCGTCGTCGGTGAAACAGCCGATGATTTTGCTGCGCTGCGTCAACAATTGGCTGCATCCGATAAGCCTGT CTACTTAGTTTACCCATCAGAGAACAGCATATCGGCAAATGAGACTAAGGTTGAAGAGGAAGTGATCCTTCTCTTCTTAG ATGGCACTTGGAGAAAGGCCTATAAATTGCTGCAGCTTAACCCATGGTTACAGGCTTATCCTGCCTTGCACTTGGATTTG GACAGTGCTTCAAATTACACCATACGTAAGGCGAGCCGAAGCGATAGTCTGTCCACATTAGAGGCCGCGGCCATGATGTT AAAAGCCATAGATAACGAGCAAGATGTCGCGCCGCTAACTAAGGCATTAGATGCCATGGTAGAGCAAAGGTTAGCTTCTA TGCCTGCCGATGTGCGGGCTAGATATCAATAA
Upstream 100 bases:
>100_bases AGCTCCAAGTGTGCAACAAATTCATTCACTGAATTAGTTGGTTAAAATGATGTCCATATAAGTTCTGCTTGAAATTTACA CTAAAGTTATTGAGATTGTA
Downstream 100 bases:
>100_bases CCATTATTATTTTTAGTGGTTTTTATATTGGCTGAGTAAGTGTAAAAACTCACTGCAGTTTTTGGGCGAGATACAGATGT AAGTTTTTGTGATTCAAATC
Product: DTW domain-containing protein
Products: NA
Alternate protein names: DTW Domain Containing Protein; DTW Domain Protein; Cytoplasmic Protein; Dtw Domain Containing Protein; DTW Domain; DTW Protein
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSSYRVICINTRLQFAGYFKQLPRGLVSRPTCPNCHYPQNACLCASIELMQVTPELIILQDPSEVGHAKNSVRLLELVIA ETQVVVGETADDFAALRQQLAASDKPVYLVYPSENSISANETKVEEEVILLFLDGTWRKAYKLLQLNPWLQAYPALHLDL DSASNYTIRKASRSDSLSTLEAAAMMLKAIDNEQDVAPLTKALDAMVEQRLASMPADVRARYQ
Sequences:
>Translated_223_residues MSSYRVICINTRLQFAGYFKQLPRGLVSRPTCPNCHYPQNACLCASIELMQVTPELIILQDPSEVGHAKNSVRLLELVIA ETQVVVGETADDFAALRQQLAASDKPVYLVYPSENSISANETKVEEEVILLFLDGTWRKAYKLLQLNPWLQAYPALHLDL DSASNYTIRKASRSDSLSTLEAAAMMLKAIDNEQDVAPLTKALDAMVEQRLASMPADVRARYQ >Mature_222_residues SSYRVICINTRLQFAGYFKQLPRGLVSRPTCPNCHYPQNACLCASIELMQVTPELIILQDPSEVGHAKNSVRLLELVIAE TQVVVGETADDFAALRQQLAASDKPVYLVYPSENSISANETKVEEEVILLFLDGTWRKAYKLLQLNPWLQAYPALHLDLD SASNYTIRKASRSDSLSTLEAAAMMLKAIDNEQDVAPLTKALDAMVEQRLASMPADVRARYQ
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24861; Mature: 24730
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSYRVICINTRLQFAGYFKQLPRGLVSRPTCPNCHYPQNACLCASIELMQVTPELIILQ CCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEEE DPSEVGHAKNSVRLLELVIAETQVVVGETADDFAALRQQLAASDKPVYLVYPSENSISAN CCHHHCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC ETKVEEEVILLFLDGTWRKAYKLLQLNPWLQAYPALHLDLDSASNYTIRKASRSDSLSTL HHCCCEEEEEEEECCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCEEEEECCCCCCHHHH EAAAMMLKAIDNEQDVAPLTKALDAMVEQRLASMPADVRARYQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure SSYRVICINTRLQFAGYFKQLPRGLVSRPTCPNCHYPQNACLCASIELMQVTPELIILQ CCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEEE DPSEVGHAKNSVRLLELVIAETQVVVGETADDFAALRQQLAASDKPVYLVYPSENSISAN CCHHHCCCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC ETKVEEEVILLFLDGTWRKAYKLLQLNPWLQAYPALHLDLDSASNYTIRKASRSDSLSTL HHCCCEEEEEEEECCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCEEEEECCCCCCHHHH EAAAMMLKAIDNEQDVAPLTKALDAMVEQRLASMPADVRARYQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA