| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963739
Identifier: 157963739
GI number: 157963739
Start: 4776409
End: 4776954
Strand: Direct
Name: 157963739
Synonym: Spea_3928
Alternate gene names: NA
Gene position: 4776409-4776954 (Clockwise)
Preceding gene: 157963737
Following gene: 157963740
Centisome position: 92.31
GC content: 45.97
Gene sequence:
>546_bases ATGCGTGCAGGCTTAGTTTTACTACTGTTATTGGTCGCAACCTTGGCACATGCCACCGTTTATAAATGGGTCGATGAAAA TGGCAAGGTTCATTTCTCTGACAAGCCGGTAAAGAATGCCGAAGTTGTCGAGCTCAATGAAAACACCCAAAACAGTATCA AATTGCCCGATCCGATCGTCTTACCTAGTCTTAACACCCCTGCCGATAGCGATAAAGCCAGTTACAAACTTAATATCGCC TCTCCCAGTGAAGAAGAGACGATCCGCAGTAACGAAGGCAAGATAACCCTTATCGCTAATAGTGATCCGCAGCTGTCATC AGCCCACGAATTCGTGCTCTATATGGATGGTCAGCAGCTAGGAAGCGCGCAGAAAAGTGGCCAGTTCAAACTCAGCGATA TCGATCGCGGCGAACACAGCTTTGTTATTAAGGTATTGAGCAAAAACGGCAAACAACTTGCAGCAACTCCTCCAAGGAAG GTATTTCTTCATCGGACGAGCTTAAATCAACCTAAAGCTATTAGGCCTCAGCCTAGAAGCAATTAG
Upstream 100 bases:
>100_bases CGCACTTTCGTCTTATTTCATCAAACATAAAGTCGATGCTTTTCTATAGAAAAACAGCTACTCTTCGAGTGATTACAACC CCGTAACAAAGGACGTCACG
Downstream 100 bases:
>100_bases TAAAAACCTTTGAATATAAAAACTTAGGATTACTTTGACTTAGTCTACATTCCGATGACCTTCTATTGCGCACTGCACCA TTTCGGTGCAACATAGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MRAGLVLLLLLVATLAHATVYKWVDENGKVHFSDKPVKNAEVVELNENTQNSIKLPDPIVLPSLNTPADSDKASYKLNIA SPSEEETIRSNEGKITLIANSDPQLSSAHEFVLYMDGQQLGSAQKSGQFKLSDIDRGEHSFVIKVLSKNGKQLAATPPRK VFLHRTSLNQPKAIRPQPRSN
Sequences:
>Translated_181_residues MRAGLVLLLLLVATLAHATVYKWVDENGKVHFSDKPVKNAEVVELNENTQNSIKLPDPIVLPSLNTPADSDKASYKLNIA SPSEEETIRSNEGKITLIANSDPQLSSAHEFVLYMDGQQLGSAQKSGQFKLSDIDRGEHSFVIKVLSKNGKQLAATPPRK VFLHRTSLNQPKAIRPQPRSN >Mature_181_residues MRAGLVLLLLLVATLAHATVYKWVDENGKVHFSDKPVKNAEVVELNENTQNSIKLPDPIVLPSLNTPADSDKASYKLNIA SPSEEETIRSNEGKITLIANSDPQLSSAHEFVLYMDGQQLGSAQKSGQFKLSDIDRGEHSFVIKVLSKNGKQLAATPPRK VFLHRTSLNQPKAIRPQPRSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19920; Mature: 19920
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGLVLLLLLVATLAHATVYKWVDENGKVHFSDKPVKNAEVVELNENTQNSIKLPDPIV CCHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCEEEEECCCCCCCEECCCCEE LPSLNTPADSDKASYKLNIASPSEEETIRSNEGKITLIANSDPQLSSAHEFVLYMDGQQL ECCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEECCHHH GSAQKSGQFKLSDIDRGEHSFVIKVLSKNGKQLAATPPRKVFLHRTSLNQPKAIRPQPRS CCCCCCCCEEEECCCCCCCEEEEEEECCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCC N C >Mature Secondary Structure MRAGLVLLLLLVATLAHATVYKWVDENGKVHFSDKPVKNAEVVELNENTQNSIKLPDPIV CCHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCEEEEECCCCCCCEECCCCEE LPSLNTPADSDKASYKLNIASPSEEETIRSNEGKITLIANSDPQLSSAHEFVLYMDGQQL ECCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEECCHHH GSAQKSGQFKLSDIDRGEHSFVIKVLSKNGKQLAATPPRKVFLHRTSLNQPKAIRPQPRS CCCCCCCCEEEECCCCCCCEEEEEEECCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA