| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963696
Identifier: 157963696
GI number: 157963696
Start: 4732994
End: 4733857
Strand: Direct
Name: 157963696
Synonym: Spea_3885
Alternate gene names: NA
Gene position: 4732994-4733857 (Clockwise)
Preceding gene: 157963695
Following gene: 157963697
Centisome position: 91.47
GC content: 48.96
Gene sequence:
>864_bases ATGCAACTCAGTCAAGAAGATAGAATTTCCCCACAGGAAAAAAGTTCTGGCACCAACGGTCTGGCAATTCTGGCTATAGT TGCCGTTGTAGCGCTATCTGCTGGCGGCTACTACTACCTCAGTGGTAACGAAAAAATCGAAGAGCCACAAATCATTGCAC CAGTGGTGATCCCCGATCCAGTTCCGGAACAGCCACTTGAAACTGAAGCCGTGCCAGAGCCCGAAATCGTCGAAGCCGTG CCTGTTCAGCTACCTGAAGTGGAGCCAGTCCCCGAAGTTGAGCCACTACCCGCGCTAGCCGATAGCGACACCTATGTGCA GCAAAAAGTGATCGAAGTTGCCGATGGTATGGCGATTGAACCTCTGTTGATTGAAGATAATGTAGTACGTCAATTTGTGG TGTTCGTTGATAACTTAGCGCAAGGTGAGTTGGCGCGCAAAACGGCTCCTTTAAAGGCGCCTAGCAATAGCTTCACCGTA TCGGAAATTGCCAATAAGACCTATATCAACCCAGACAGTTACCACAGATATGACCTGTACGCCGACTTCCTAGCAAGCTT AAATGACCAAGAGCTCGCTAAGACCTACAAAGAGATGACGCCGCTACTCGGTGAAGCCTTTGCAGAGCTAGGCTACAGCG ATATTTCGTTTGATGATCGCATGCAGCAAGCCATCGAAGTCATGTTAGATGCGCCGATTATCGAGCAGCCAATTGAGCTA GACGGTGTCAGCGTTAACTATCAGTTTGTCGACCCTAAACTAGAAGCACTGCCTAATGCGCAGAAGCTGATGATCCGCAT GGGTCCTGAAAACTCACGTAAGGTAAAGTCGGCACTACGCCGCCTACAAAAACATCTTAACTAA
Upstream 100 bases:
>100_bases AGAGGCTTAGCCTATAGACAATCCGTTGGAATATTGCAAAATGGATTAAAGCTATACTTTATTATTCGTTGTATCACTAC GCTGTCGCAGAGGAGTTAAA
Downstream 100 bases:
>100_bases GCCTGCAGGCAAATTATCCGCTTTTAAGAGCCCTGAATTAACAGGGCTCACATCTTGACCTAACATTTGCCACGCTAGCC TCACCTTTTGGCGACACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MQLSQEDRISPQEKSSGTNGLAILAIVAVVALSAGGYYYLSGNEKIEEPQIIAPVVIPDPVPEQPLETEAVPEPEIVEAV PVQLPEVEPVPEVEPLPALADSDTYVQQKVIEVADGMAIEPLLIEDNVVRQFVVFVDNLAQGELARKTAPLKAPSNSFTV SEIANKTYINPDSYHRYDLYADFLASLNDQELAKTYKEMTPLLGEAFAELGYSDISFDDRMQQAIEVMLDAPIIEQPIEL DGVSVNYQFVDPKLEALPNAQKLMIRMGPENSRKVKSALRRLQKHLN
Sequences:
>Translated_287_residues MQLSQEDRISPQEKSSGTNGLAILAIVAVVALSAGGYYYLSGNEKIEEPQIIAPVVIPDPVPEQPLETEAVPEPEIVEAV PVQLPEVEPVPEVEPLPALADSDTYVQQKVIEVADGMAIEPLLIEDNVVRQFVVFVDNLAQGELARKTAPLKAPSNSFTV SEIANKTYINPDSYHRYDLYADFLASLNDQELAKTYKEMTPLLGEAFAELGYSDISFDDRMQQAIEVMLDAPIIEQPIEL DGVSVNYQFVDPKLEALPNAQKLMIRMGPENSRKVKSALRRLQKHLN >Mature_287_residues MQLSQEDRISPQEKSSGTNGLAILAIVAVVALSAGGYYYLSGNEKIEEPQIIAPVVIPDPVPEQPLETEAVPEPEIVEAV PVQLPEVEPVPEVEPLPALADSDTYVQQKVIEVADGMAIEPLLIEDNVVRQFVVFVDNLAQGELARKTAPLKAPSNSFTV SEIANKTYINPDSYHRYDLYADFLASLNDQELAKTYKEMTPLLGEAFAELGYSDISFDDRMQQAIEVMLDAPIIEQPIEL DGVSVNYQFVDPKLEALPNAQKLMIRMGPENSRKVKSALRRLQKHLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31728; Mature: 31728
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSQEDRISPQEKSSGTNGLAILAIVAVVALSAGGYYYLSGNEKIEEPQIIAPVVIPDP CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCC VPEQPLETEAVPEPEIVEAVPVQLPEVEPVPEVEPLPALADSDTYVQQKVIEVADGMAIE CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEC PLLIEDNVVRQFVVFVDNLAQGELARKTAPLKAPSNSFTVSEIANKTYINPDSYHRYDLY EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCCCCCCCCCCHHHHH ADFLASLNDQELAKTYKEMTPLLGEAFAELGYSDISFDDRMQQAIEVMLDAPIIEQPIEL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCC DGVSVNYQFVDPKLEALPNAQKLMIRMGPENSRKVKSALRRLQKHLN CCEEEEEEEECCHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MQLSQEDRISPQEKSSGTNGLAILAIVAVVALSAGGYYYLSGNEKIEEPQIIAPVVIPDP CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCCC VPEQPLETEAVPEPEIVEAVPVQLPEVEPVPEVEPLPALADSDTYVQQKVIEVADGMAIE CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEC PLLIEDNVVRQFVVFVDNLAQGELARKTAPLKAPSNSFTVSEIANKTYINPDSYHRYDLY EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCCCCCCCCCCHHHHH ADFLASLNDQELAKTYKEMTPLLGEAFAELGYSDISFDDRMQQAIEVMLDAPIIEQPIEL HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHCCCCCC DGVSVNYQFVDPKLEALPNAQKLMIRMGPENSRKVKSALRRLQKHLN CCEEEEEEEECCHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA