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The map label for this gene is 157963587

Identifier: 157963587

GI number: 157963587

Start: 4590045

End: 4590818

Strand: Reverse

Name: 157963587

Synonym: Spea_3775

Alternate gene names: NA

Gene position: 4590818-4590045 (Counterclockwise)

Preceding gene: 157963588

Following gene: 157963586

Centisome position: 88.72

GC content: 42.89

Gene sequence:

>774_bases
ATGGGGCTAATTAGAATACTGGCGTTGCTATTGTTATCTTTGCAAGCACTCGCTGTGCAAGCGAGTCAATGTGTGCCGAC
TCAGTTTGATGAAACTGTTACTTTAGACTATATCAACGATGGCGATACTATCACTTTAACCGATGGTCGATTGATCCGCC
TTATCGGTGTCGACTCGCCCGAAATCGATTTTGAATTTCCTGCACTGTCTCAGCCTTACGCGACTTCAGCTAAAGCCTTT
CTCTCGGATCGCATTAAACCCGGTCAGACCCTGTTACTTGCTTTCGATAAGCGACGTTTAGATCCTTTCGGCCGCACACT
TGCCTATGTTTACACGCAAGAATTACAGCATCTGCAAGAGTTGATGCTAGCTAATGGCTATGCCAAGGCAAGGGTCTATC
AGAATGATTATTTTTGGCAGTGTTTGAGTCAAATTGAGCAAGTAGCTCGCGAAGATCGAGTAGGGCTTTGGAGCCTTAAA
GATTACCAAGCCAAGTCAACAGATACGCTTTCACGTATTGATGCCAATAAATGGCTAGAGGTCAGAGGTGTTGTTACTGG
TTATGAAAGAAAAGGTCAAAATTTTGAGCTGAAAATCGACAATAACTTAGTTGTGATGATGTCTCAGCAAGATATTGGTA
AGTTTAGTAACATTTTGACGCTAGAACTGCTCGAAACTAGCGTTGTTGTTCGAGGTAAGCTGTATTTTTCTTACGGTAAA
TATCGGCTAAATGCGACGCATCCATCCCAGATAACCATGAAAAATAGCCCTTAG

Upstream 100 bases:

>100_bases
TTAGTTAACTAAGTAGCTATCGGTTATGGGCTCGTGTTACTTTTACTTTTTAATCTATTGTCGTCACTTTAGACACAGTA
ATTGATAAGGCAGCCATAAC

Downstream 100 bases:

>100_bases
GAATAATATATAGCGATAAAGTTAAAAAATGAGAAGAACTTATTTGAAATGACCTGAGATTCAAGTATCTTAGCGGGAAT
CAACTAACTGTTTTTTGTTC

Product: nuclease

Products: NA

Alternate protein names: Thermonuclease; Staphylococcal Nuclease; Staphylococcal Nuclease-Like Protein; Rmonuclease Family Protein; Nuclease Domain Protein; Thermonuclease Family Protein; Micrococcal Nuclease

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MGLIRILALLLLSLQALAVQASQCVPTQFDETVTLDYINDGDTITLTDGRLIRLIGVDSPEIDFEFPALSQPYATSAKAF
LSDRIKPGQTLLLAFDKRRLDPFGRTLAYVYTQELQHLQELMLANGYAKARVYQNDYFWQCLSQIEQVAREDRVGLWSLK
DYQAKSTDTLSRIDANKWLEVRGVVTGYERKGQNFELKIDNNLVVMMSQQDIGKFSNILTLELLETSVVVRGKLYFSYGK
YRLNATHPSQITMKNSP

Sequences:

>Translated_257_residues
MGLIRILALLLLSLQALAVQASQCVPTQFDETVTLDYINDGDTITLTDGRLIRLIGVDSPEIDFEFPALSQPYATSAKAF
LSDRIKPGQTLLLAFDKRRLDPFGRTLAYVYTQELQHLQELMLANGYAKARVYQNDYFWQCLSQIEQVAREDRVGLWSLK
DYQAKSTDTLSRIDANKWLEVRGVVTGYERKGQNFELKIDNNLVVMMSQQDIGKFSNILTLELLETSVVVRGKLYFSYGK
YRLNATHPSQITMKNSP
>Mature_256_residues
GLIRILALLLLSLQALAVQASQCVPTQFDETVTLDYINDGDTITLTDGRLIRLIGVDSPEIDFEFPALSQPYATSAKAFL
SDRIKPGQTLLLAFDKRRLDPFGRTLAYVYTQELQHLQELMLANGYAKARVYQNDYFWQCLSQIEQVAREDRVGLWSLKD
YQAKSTDTLSRIDANKWLEVRGVVTGYERKGQNFELKIDNNLVVMMSQQDIGKFSNILTLELLETSVVVRGKLYFSYGKY
RLNATHPSQITMKNSP

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29246; Mature: 29115

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIRILALLLLSLQALAVQASQCVPTQFDETVTLDYINDGDTITLTDGRLIRLIGVDSP
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCEEEEEEECCCC
EIDFEFPALSQPYATSAKAFLSDRIKPGQTLLLAFDKRRLDPFGRTLAYVYTQELQHLQE
CCCEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
LMLANGYAKARVYQNDYFWQCLSQIEQVAREDRVGLWSLKDYQAKSTDTLSRIDANKWLE
HHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHCCCCCEEE
VRGVVTGYERKGQNFELKIDNNLVVMMSQQDIGKFSNILTLELLETSVVVRGKLYFSYGK
EEEEEECHHCCCCEEEEEECCCEEEEEECCCHHHHHCEEEEEEECCEEEEEEEEEEEECE
YRLNATHPSQITMKNSP
EEEECCCCCEEEECCCC
>Mature Secondary Structure 
GLIRILALLLLSLQALAVQASQCVPTQFDETVTLDYINDGDTITLTDGRLIRLIGVDSP
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCEEEEEEECCCC
EIDFEFPALSQPYATSAKAFLSDRIKPGQTLLLAFDKRRLDPFGRTLAYVYTQELQHLQE
CCCEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
LMLANGYAKARVYQNDYFWQCLSQIEQVAREDRVGLWSLKDYQAKSTDTLSRIDANKWLE
HHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHCCCCCEEE
VRGVVTGYERKGQNFELKIDNNLVVMMSQQDIGKFSNILTLELLETSVVVRGKLYFSYGK
EEEEEECHHCCCCEEEEEECCCEEEEEECCCHHHHHCEEEEEEECCEEEEEEEEEEEECE
YRLNATHPSQITMKNSP
EEEECCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA