| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is maeB [H]
Identifier: 157963586
GI number: 157963586
Start: 4588590
End: 4589840
Strand: Reverse
Name: maeB [H]
Synonym: Spea_3774
Alternate gene names: 157963586
Gene position: 4589840-4588590 (Counterclockwise)
Preceding gene: 157963587
Following gene: 157963585
Centisome position: 88.7
GC content: 45.96
Gene sequence:
>1251_bases ATGGCAGATCTTCGTCAACAAGCCCTCGATTATCATGAATTCCCAGTTCCAGGCAAAACAGCAGTTTGCCTAACCAAGCC CGCAGAAACCAGCATGGACCTAGCGCTAGCATATAGCCCTGGCGTAGCTGAACCTGTCCGTGAAATTGCGGCTAATCCAG ACAATGCGTACCGCTATACAGGTAAAGGCAATACTGTTGCTGTTATCTCAAATGGTACGGCAATCTTAGGTTTAGGGAAT TTAGGCCCGTTGGCCTCTAAGCCTGTTATGGAAGGTAAAGCGCTACTTTTCAAACACTTTGCGAATATCGATGCTACAGA CATTGAAGTTAAACACAGAACGTCTGAAGAGTTCATCAACGTAGTTGAGGCGATTGCCGACACGTTTGGTGGTATTAACC TTGAAGATATCAAGGCACCAGAGTGTTTTGAGATTGAAAAAGCACTGATTGAGCGTTGTAACGTACCAGTATTCCACGAT GATCAGCATGGTACTGCGATTGTGACTGCGGCCGGTATGATTAACGCACTGGAAATTCAAGGCAAGTCTATCGAAGAGGC TGTGTTTGTATGTATGGGCGCCGGCGCTGCAGCTATTGCCTGTATGACTATGATTGTGAACTGTGGCGCTCAGCGCGAAA ACGTTTACATGCTAGATAGAAAAGGCGTTATTCATACTCGTCGTGAAGACATCAACGAGTACAAGGCGCTATTTGCCAAC AATACAGATAAGCGCACCCTGCAGGATGTGATTAAAGGTGCTGACGTATTCTTAGGTCTTTCTGGCCCAGATGTATTAGG CGCTGAAGATGTGGCATTGATGGCCGATAAGCCAGTTATTTTTGCTTGTTCTAACCCAGATCCTGAGATCAAGCCTGAAC TGGCACACGACGTGCGTAAAGATTTGATCATGGGGACGGGTCGTAGTGATTATCCTAACCAAGTTAACAATGTACTTTGC TTCCCATTCATTTTCCGTGGTGCGCTAGATGTTCGTGCTTCAAGTATTAATGATGAGATGAAGATTGCAGCGGTACATGC TATTGCAGCATTAGCTAAAGAGCCTGTTCCTGCGTCTGTGCTTGCAGCTTACCCAAATGTTGACTCGCTAGAGTTTGGTC CTGAGTACGTGATCCCTAAACCAATCGATGCACGTCTTCTACCAAACGTTGCTAAAGCCGTTGCTATTGCAGCAATTGAA TCGGGTGTAGCGACAATTAAAGAGCTACCAGAAGGCTACATGGAGTCTTAA
Upstream 100 bases:
>100_bases AAAGAACCTTTTAAATGTATCTTTATTGAGCAGCATGATTAACCTTTTAGTTGTCGACCTTTCGCTCAGGATATTATTAG TCGCACTCAGGATTAGAAAA
Downstream 100 bases:
>100_bases TCACTTGGTGCCATACTCAAGCGACTGAATTCTGTATCTTCAGGTGGCTTGGGCATACATCATAAAATAAGGGCCTAGTG GCCCTTTTTTGTTGCCGAGC
Product: malate dehydrogenase
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MADLRQQALDYHEFPVPGKTAVCLTKPAETSMDLALAYSPGVAEPVREIAANPDNAYRYTGKGNTVAVISNGTAILGLGN LGPLASKPVMEGKALLFKHFANIDATDIEVKHRTSEEFINVVEAIADTFGGINLEDIKAPECFEIEKALIERCNVPVFHD DQHGTAIVTAAGMINALEIQGKSIEEAVFVCMGAGAAAIACMTMIVNCGAQRENVYMLDRKGVIHTRREDINEYKALFAN NTDKRTLQDVIKGADVFLGLSGPDVLGAEDVALMADKPVIFACSNPDPEIKPELAHDVRKDLIMGTGRSDYPNQVNNVLC FPFIFRGALDVRASSINDEMKIAAVHAIAALAKEPVPASVLAAYPNVDSLEFGPEYVIPKPIDARLLPNVAKAVAIAAIE SGVATIKELPEGYMES
Sequences:
>Translated_416_residues MADLRQQALDYHEFPVPGKTAVCLTKPAETSMDLALAYSPGVAEPVREIAANPDNAYRYTGKGNTVAVISNGTAILGLGN LGPLASKPVMEGKALLFKHFANIDATDIEVKHRTSEEFINVVEAIADTFGGINLEDIKAPECFEIEKALIERCNVPVFHD DQHGTAIVTAAGMINALEIQGKSIEEAVFVCMGAGAAAIACMTMIVNCGAQRENVYMLDRKGVIHTRREDINEYKALFAN NTDKRTLQDVIKGADVFLGLSGPDVLGAEDVALMADKPVIFACSNPDPEIKPELAHDVRKDLIMGTGRSDYPNQVNNVLC FPFIFRGALDVRASSINDEMKIAAVHAIAALAKEPVPASVLAAYPNVDSLEFGPEYVIPKPIDARLLPNVAKAVAIAAIE SGVATIKELPEGYMES >Mature_415_residues ADLRQQALDYHEFPVPGKTAVCLTKPAETSMDLALAYSPGVAEPVREIAANPDNAYRYTGKGNTVAVISNGTAILGLGNL GPLASKPVMEGKALLFKHFANIDATDIEVKHRTSEEFINVVEAIADTFGGINLEDIKAPECFEIEKALIERCNVPVFHDD QHGTAIVTAAGMINALEIQGKSIEEAVFVCMGAGAAAIACMTMIVNCGAQRENVYMLDRKGVIHTRREDINEYKALFANN TDKRTLQDVIKGADVFLGLSGPDVLGAEDVALMADKPVIFACSNPDPEIKPELAHDVRKDLIMGTGRSDYPNQVNNVLCF PFIFRGALDVRASSINDEMKIAAVHAIAALAKEPVPASVLAAYPNVDSLEFGPEYVIPKPIDARLLPNVAKAVAIAAIES GVATIKELPEGYMES
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=350, Percent_Identity=26.2857142857143, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI62420880, Length=350, Percent_Identity=26.2857142857143, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI239049447, Length=350, Percent_Identity=26.2857142857143, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI4505143, Length=343, Percent_Identity=24.7813411078717, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI4505145, Length=371, Percent_Identity=25.6064690026954, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1788806, Length=404, Percent_Identity=62.1287128712871, Blast_Score=479, Evalue=1e-136, Organism=Escherichia coli, GI87081919, Length=242, Percent_Identity=26.0330578512397, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17537199, Length=367, Percent_Identity=25.8855585831063, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322823, Length=328, Percent_Identity=25.9146341463415, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI78707242, Length=401, Percent_Identity=25.9351620947631, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI78707238, Length=401, Percent_Identity=25.9351620947631, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI78707240, Length=339, Percent_Identity=26.8436578171091, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI281362674, Length=409, Percent_Identity=26.6503667481663, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281362672, Length=409, Percent_Identity=26.6503667481663, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI21356279, Length=408, Percent_Identity=26.2254901960784, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281363503, Length=357, Percent_Identity=22.96918767507, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI281363505, Length=357, Percent_Identity=22.96918767507, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707236, Length=357, Percent_Identity=22.96918767507, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707232, Length=357, Percent_Identity=22.96918767507, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646388, Length=365, Percent_Identity=27.3972602739726, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24646386, Length=365, Percent_Identity=27.3972602739726, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 44620; Mature: 44488
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLRQQALDYHEFPVPGKTAVCLTKPAETSMDLALAYSPGVAEPVREIAANPDNAYRYT CCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEE GKGNTVAVISNGTAILGLGNLGPLASKPVMEGKALLFKHFANIDATDIEVKHRTSEEFIN CCCCEEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHH VVEAIADTFGGINLEDIKAPECFEIEKALIERCNVPVFHDDQHGTAIVTAAGMINALEIQ HHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCEEEEEEC GKSIEEAVFVCMGAGAAAIACMTMIVNCGAQRENVYMLDRKGVIHTRREDINEYKALFAN CCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC NTDKRTLQDVIKGADVFLGLSGPDVLGAEDVALMADKPVIFACSNPDPEIKPELAHDVRK CCCHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHH DLIMGTGRSDYPNQVNNVLCFPFIFRGALDVRASSINDEMKIAAVHAIAALAKEPVPASV HHEECCCCCCCCHHHHCEEEEHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHH LAAYPNVDSLEFGPEYVIPKPIDARLLPNVAKAVAIAAIESGVATIKELPEGYMES HEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure ADLRQQALDYHEFPVPGKTAVCLTKPAETSMDLALAYSPGVAEPVREIAANPDNAYRYT CCHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHCCCCCCEEEE GKGNTVAVISNGTAILGLGNLGPLASKPVMEGKALLFKHFANIDATDIEVKHRTSEEFIN CCCCEEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHH VVEAIADTFGGINLEDIKAPECFEIEKALIERCNVPVFHDDQHGTAIVTAAGMINALEIQ HHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCEEEEEEC GKSIEEAVFVCMGAGAAAIACMTMIVNCGAQRENVYMLDRKGVIHTRREDINEYKALFAN CCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCC NTDKRTLQDVIKGADVFLGLSGPDVLGAEDVALMADKPVIFACSNPDPEIKPELAHDVRK CCCHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCHHHHHHHH DLIMGTGRSDYPNQVNNVLCFPFIFRGALDVRASSINDEMKIAAVHAIAALAKEPVPASV HHEECCCCCCCCHHHHCEEEEHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHH LAAYPNVDSLEFGPEYVIPKPIDARLLPNVAKAVAIAAIESGVATIKELPEGYMES HEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]