| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is caiD [C]
Identifier: 157963521
GI number: 157963521
Start: 4515241
End: 4516047
Strand: Reverse
Name: caiD [C]
Synonym: Spea_3709
Alternate gene names: 157963521
Gene position: 4516047-4515241 (Counterclockwise)
Preceding gene: 157963524
Following gene: 157963520
Centisome position: 87.27
GC content: 45.23
Gene sequence:
>807_bases ATGACTGATGATTTAGTACGTATTACCAAGGAGAATGGCATTGCTTTTGTGAGTCTTAATCGGCCAGATAAGTATAATGC ATTGAATTACGAGCTTTTTAAGCAGATTGATCGCTGCATAAAAACACTAGCGCGAGACAAAACGCTTACTGCCGTAGTGC TTTTTGGTGAAGGTGGTAATTTCAGCTCAGGCTTGGATGTAAAAAGTGTGATGAGCTCGCCGTTAGACGCGGTTAAATTA CTGTTTAAGTTTCTTCCTGGTAACGCCAATCTCGCCCAGCGCGTTTCTATAGGATGGCGACGATTACCCGTTCCCGTTAT CGCGGTGCTAGAGGGGATTTGTTATGGCGGCGGCATGCAAATAGTCTTAGGTGCCGATTTTAGAATCGCTGCACCAGATT GCAAGATGTCGATAATGGAAGCTAAATGGGGGCTCGTGCCTGATATGGCTGGCTTAGCGGGCTTGCGAGAGTTAATGCCA AAAGATCAGGCGCTTATGTTAACAATGTCGGCAGATGTTATCTCTGCTGAAAAGGCCTTATCCATGAATTTGATTACGGC TGTGGAAGATAATCCTATGGCCGCAGCTAGCAAATTGGCGAGTAAGTTATCGCAAACCTCTCCCGATGCCAATGCGGCAA TTAAGCGCAGTATAAATAAGAGTTGGTCGGCTCCCGTTCGACTGCTGTTAGGGCGTGAGTCTTGGTATCAGGTGCGCTTA TTATTGGGAAAAAATCGAGTGATTGCAGCATTAAGACAGACTAAGAAACCAGATAAAACTTATAGAAACAGGCAATCAGG CTGGTAA
Upstream 100 bases:
>100_bases AATGTCATAATTCCTACGTATGTTATAGCTATTAACGAAATATTCCAAATGTGTTAACTTTGCTTTCTGGACAGACCACT TGGCAAGGAAGGACGCGAAT
Downstream 100 bases:
>100_bases TTTTTAGCTAAGATGATGAAGTGTGACCAGGTTCACGAATTGTTGTGAATTTTCTGTAGTAGGCAAGGGCTTATTCTACA CTCCCGCCTATTCTAAGGTT
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTDDLVRITKENGIAFVSLNRPDKYNALNYELFKQIDRCIKTLARDKTLTAVVLFGEGGNFSSGLDVKSVMSSPLDAVKL LFKFLPGNANLAQRVSIGWRRLPVPVIAVLEGICYGGGMQIVLGADFRIAAPDCKMSIMEAKWGLVPDMAGLAGLRELMP KDQALMLTMSADVISAEKALSMNLITAVEDNPMAAASKLASKLSQTSPDANAAIKRSINKSWSAPVRLLLGRESWYQVRL LLGKNRVIAALRQTKKPDKTYRNRQSGW
Sequences:
>Translated_268_residues MTDDLVRITKENGIAFVSLNRPDKYNALNYELFKQIDRCIKTLARDKTLTAVVLFGEGGNFSSGLDVKSVMSSPLDAVKL LFKFLPGNANLAQRVSIGWRRLPVPVIAVLEGICYGGGMQIVLGADFRIAAPDCKMSIMEAKWGLVPDMAGLAGLRELMP KDQALMLTMSADVISAEKALSMNLITAVEDNPMAAASKLASKLSQTSPDANAAIKRSINKSWSAPVRLLLGRESWYQVRL LLGKNRVIAALRQTKKPDKTYRNRQSGW >Mature_267_residues TDDLVRITKENGIAFVSLNRPDKYNALNYELFKQIDRCIKTLARDKTLTAVVLFGEGGNFSSGLDVKSVMSSPLDAVKLL FKFLPGNANLAQRVSIGWRRLPVPVIAVLEGICYGGGMQIVLGADFRIAAPDCKMSIMEAKWGLVPDMAGLAGLRELMPK DQALMLTMSADVISAEKALSMNLITAVEDNPMAAASKLASKLSQTSPDANAAIKRSINKSWSAPVRLLLGRESWYQVRLL LGKNRVIAALRQTKKPDKTYRNRQSGW
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI70995211, Length=190, Percent_Identity=31.0526315789474, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI213417737, Length=216, Percent_Identity=24.537037037037, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI157694516, Length=216, Percent_Identity=24.537037037037, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI68989263, Length=232, Percent_Identity=28.0172413793103, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI194097323, Length=216, Percent_Identity=26.3888888888889, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI31542718, Length=197, Percent_Identity=27.9187817258883, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1787660, Length=230, Percent_Identity=30.4347826086957, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI221142681, Length=273, Percent_Identity=26.7399267399267, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787659, Length=258, Percent_Identity=25.968992248062, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1790281, Length=178, Percent_Identity=28.0898876404494, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788682, Length=215, Percent_Identity=27.4418604651163, Blast_Score=67, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17540714, Length=217, Percent_Identity=30.8755760368664, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17536985, Length=262, Percent_Identity=24.0458015267176, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17534483, Length=210, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560910, Length=210, Percent_Identity=25.2380952380952, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25145438, Length=220, Percent_Identity=25.4545454545455, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17554946, Length=256, Percent_Identity=21.484375, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17558304, Length=192, Percent_Identity=26.0416666666667, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25141363, Length=191, Percent_Identity=27.7486910994764, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI20129971, Length=227, Percent_Identity=24.6696035242291, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24653477, Length=227, Percent_Identity=24.6696035242291, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24653139, Length=256, Percent_Identity=26.171875, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI21357171, Length=259, Percent_Identity=21.2355212355212, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 29386; Mature: 29255
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDLVRITKENGIAFVSLNRPDKYNALNYELFKQIDRCIKTLARDKTLTAVVLFGEGGN CCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC FSSGLDVKSVMSSPLDAVKLLFKFLPGNANLAQRVSIGWRRLPVPVIAVLEGICYGGGMQ CCCCCCHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEE IVLGADFRIAAPDCKMSIMEAKWGLVPDMAGLAGLRELMPKDQALMLTMSADVISAEKAL EEEECCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH SMNLITAVEDNPMAAASKLASKLSQTSPDANAAIKRSINKSWSAPVRLLLGRESWYQVRL HHEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCCEEEEE LLGKNRVIAALRQTKKPDKTYRNRQSGW ECCCCHHHHHHHHCCCCCHHHHCCCCCC >Mature Secondary Structure TDDLVRITKENGIAFVSLNRPDKYNALNYELFKQIDRCIKTLARDKTLTAVVLFGEGGN CCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC FSSGLDVKSVMSSPLDAVKLLFKFLPGNANLAQRVSIGWRRLPVPVIAVLEGICYGGGMQ CCCCCCHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEE IVLGADFRIAAPDCKMSIMEAKWGLVPDMAGLAGLRELMPKDQALMLTMSADVISAEKAL EEEECCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH SMNLITAVEDNPMAAASKLASKLSQTSPDANAAIKRSINKSWSAPVRLLLGRESWYQVRL HHEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCCEEEEE LLGKNRVIAALRQTKKPDKTYRNRQSGW ECCCCHHHHHHHHCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA