| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963487
Identifier: 157963487
GI number: 157963487
Start: 4473931
End: 4474434
Strand: Reverse
Name: 157963487
Synonym: Spea_3675
Alternate gene names: NA
Gene position: 4474434-4473931 (Counterclockwise)
Preceding gene: 157963489
Following gene: 157963486
Centisome position: 86.47
GC content: 47.82
Gene sequence:
>504_bases ATGAAGAAGACTTTTGTTACCACTGTCAGCGGTGTGACTGAACCAGACATAATTAAATCGTTGGCCGAGATCACCCGTAA ACATGGTGGTGAATGGCAAATGAGTAAAGTCATTAAACTCGGCGGACAGTTTACTGCGCTGTTTGAGGTGGCTATCGAGG CTGAATCTCAGCCGCAACTTGAGTCTGACTTTGTGGCTCATTTCCCTGCGCTATACTTTTCCTACGCTCTAGTCGCTGAG CGCTCCCCTAGCGCATATCAAACCGCCAAATTTGTATTTGATTGTAATGACCGCCCCGGTTTAACACGAGACATTGACAG TATTTTGGCTGTTCTCGAGGTCGACGTTGAGTCGTTGGAATGTCACCGTCTAGCCGTTATCGGCATGGGGTCTCCGGTAT TTTCCTCAACCTTAACCCTTGCTATTCCGGAGTCTGTAACCAGCAAGAGAGTGATTGAGTCACTCGAAGGCTTAGGTGAT GATGTGAGAGTGAGCCAGATCTAA
Upstream 100 bases:
>100_bases ATTGGTATAGCACTGTGGCTGTGGTAGATTGATTCTATCGATAAGTTTGTATGTGAGCGATTCGTTTTCACTGTATATTT TGTATTGAGAGGTACTTGGT
Downstream 100 bases:
>100_bases CTGACTACTGTTATCGGGCCTGTGCATTCGAGCTTATATGGATGCACAGCTCTGAGATGACTTATCTAGAGTAAGTATAA CGCGACTCCCCCGCAATAAA
Product: glycine cleavage system regulatory protein-like protein
Products: NA
Alternate protein names: Glycine Cleavage System Regulatory Protein; ACT Domain-Containing Protein; ACT Domain-Containing Regulatory Protein
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKKTFVTTVSGVTEPDIIKSLAEITRKHGGEWQMSKVIKLGGQFTALFEVAIEAESQPQLESDFVAHFPALYFSYALVAE RSPSAYQTAKFVFDCNDRPGLTRDIDSILAVLEVDVESLECHRLAVIGMGSPVFSSTLTLAIPESVTSKRVIESLEGLGD DVRVSQI
Sequences:
>Translated_167_residues MKKTFVTTVSGVTEPDIIKSLAEITRKHGGEWQMSKVIKLGGQFTALFEVAIEAESQPQLESDFVAHFPALYFSYALVAE RSPSAYQTAKFVFDCNDRPGLTRDIDSILAVLEVDVESLECHRLAVIGMGSPVFSSTLTLAIPESVTSKRVIESLEGLGD DVRVSQI >Mature_167_residues MKKTFVTTVSGVTEPDIIKSLAEITRKHGGEWQMSKVIKLGGQFTALFEVAIEAESQPQLESDFVAHFPALYFSYALVAE RSPSAYQTAKFVFDCNDRPGLTRDIDSILAVLEVDVESLECHRLAVIGMGSPVFSSTLTLAIPESVTSKRVIESLEGLGD DVRVSQI
Specific function: Unknown
COG id: COG2716
COG function: function code E; Glycine cleavage system regulatory protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18269; Mature: 18269
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFVTTVSGVTEPDIIKSLAEITRKHGGEWQMSKVIKLGGQFTALFEVAIEAESQPQL CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCH ESDFVAHFPALYFSYALVAERSPSAYQTAKFVFDCNDRPGLTRDIDSILAVLEVDVESLE HHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHC CHRLAVIGMGSPVFSSTLTLAIPESVTSKRVIESLEGLGDDVRVSQI EEEEEEEECCCHHHHCEEEEEECCHHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure MKKTFVTTVSGVTEPDIIKSLAEITRKHGGEWQMSKVIKLGGQFTALFEVAIEAESQPQL CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCH ESDFVAHFPALYFSYALVAERSPSAYQTAKFVFDCNDRPGLTRDIDSILAVLEVDVESLE HHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHC CHRLAVIGMGSPVFSSTLTLAIPESVTSKRVIESLEGLGDDVRVSQI EEEEEEEECCCHHHHCEEEEEECCHHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA