| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963471
Identifier: 157963471
GI number: 157963471
Start: 4451017
End: 4451697
Strand: Reverse
Name: 157963471
Synonym: Spea_3659
Alternate gene names: NA
Gene position: 4451697-4451017 (Counterclockwise)
Preceding gene: 157963473
Following gene: 157963468
Centisome position: 86.03
GC content: 42.29
Gene sequence:
>681_bases ATGGAAAAGTCACAAGCAGGCCTGAGTCATTACTTATCTGGGCTGTTTTTAAAGGATAGACAGGTTAGCAAACGAGTGTT CAACTTAGTGATTGGCTTAGTGTTAATCTGGGGATTTAGCCTTAATTATCTCGCCGTTGCATATTTTCCGGTTGAAATAC TGCAATGGATAAATCCTTGGGTCTTACTGGTAGTTGTGTTTGGCTCATTAATGGGTGGCTGCTTGATTATGCTCAAGTAC CCACTGCCTTTGGTGAGTTTTTTAGGCTACAACCTTATGACCTTGAGTATCAGTATTACCCTGAGCCTATTCCTACAAGG GTTTACCGCTGCTGAGGTGGCGTTAGCAGTCGAGTATACCGCAGGGATCACCTTGTTAATGATCATCACCGCAACTCTGG TACCTAAGCTCTTTTTTAGTTTTGGCAAAGTATTGTGCGTGATTGGTGGGTGGATTGTGACGGTTGAGTTTACTTGGCTA CTGTTCTTTGGCCATAGTCACGATATGATCCATTTGATCGTAGCACTGAGCTCGTGTGGTTACATTGGTTATACTTGGGC TGTTGCTTGTGAGTACGGTGAAACCTTAGATGAAGCGATAGATTTTGGTGGCATGTTGTATATGCATATCATTAACTTCT TTATTCGTATTTTGCATCTTATTGCATCGTTGCGATCGTAA
Upstream 100 bases:
>100_bases TTGCAAAGTTAACTTTTGGTTATACAGCTAAATTTCAACCTTAGTTAAGCTGCGCAGCAGTTGGCGTATAACGTCGTATT ATTGGTAGGAAAAAGCTTTC
Downstream 100 bases:
>100_bases TTGGGCACGTAATGAGATTGAACAAAAAGCACAGCCTAAGCAGTGCTTTTTGTTTCTGTGCTAAGCATAGGAGTCGGCAT TCTCAATCACGGTAGTTATA
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MEKSQAGLSHYLSGLFLKDRQVSKRVFNLVIGLVLIWGFSLNYLAVAYFPVEILQWINPWVLLVVVFGSLMGGCLIMLKY PLPLVSFLGYNLMTLSISITLSLFLQGFTAAEVALAVEYTAGITLLMIITATLVPKLFFSFGKVLCVIGGWIVTVEFTWL LFFGHSHDMIHLIVALSSCGYIGYTWAVACEYGETLDEAIDFGGMLYMHIINFFIRILHLIASLRS
Sequences:
>Translated_226_residues MEKSQAGLSHYLSGLFLKDRQVSKRVFNLVIGLVLIWGFSLNYLAVAYFPVEILQWINPWVLLVVVFGSLMGGCLIMLKY PLPLVSFLGYNLMTLSISITLSLFLQGFTAAEVALAVEYTAGITLLMIITATLVPKLFFSFGKVLCVIGGWIVTVEFTWL LFFGHSHDMIHLIVALSSCGYIGYTWAVACEYGETLDEAIDFGGMLYMHIINFFIRILHLIASLRS >Mature_226_residues MEKSQAGLSHYLSGLFLKDRQVSKRVFNLVIGLVLIWGFSLNYLAVAYFPVEILQWINPWVLLVVVFGSLMGGCLIMLKY PLPLVSFLGYNLMTLSISITLSLFLQGFTAAEVALAVEYTAGITLLMIITATLVPKLFFSFGKVLCVIGGWIVTVEFTWL LFFGHSHDMIHLIVALSSCGYIGYTWAVACEYGETLDEAIDFGGMLYMHIINFFIRILHLIASLRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25254; Mature: 25254
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSQAGLSHYLSGLFLKDRQVSKRVFNLVIGLVLIWGFSLNYLAVAYFPVEILQWINPW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VLLVVVFGSLMGGCLIMLKYPLPLVSFLGYNLMTLSISITLSLFLQGFTAAEVALAVEYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AGITLLMIITATLVPKLFFSFGKVLCVIGGWIVTVEFTWLLFFGHSHDMIHLIVALSSCG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCHHHHHHHHHHHCC YIGYTWAVACEYGETLDEAIDFGGMLYMHIINFFIRILHLIASLRS CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKSQAGLSHYLSGLFLKDRQVSKRVFNLVIGLVLIWGFSLNYLAVAYFPVEILQWINPW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VLLVVVFGSLMGGCLIMLKYPLPLVSFLGYNLMTLSISITLSLFLQGFTAAEVALAVEYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH AGITLLMIITATLVPKLFFSFGKVLCVIGGWIVTVEFTWLLFFGHSHDMIHLIVALSSCG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCHHHHHHHHHHHCC YIGYTWAVACEYGETLDEAIDFGGMLYMHIINFFIRILHLIASLRS CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA