Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963471

Identifier: 157963471

GI number: 157963471

Start: 4451017

End: 4451697

Strand: Reverse

Name: 157963471

Synonym: Spea_3659

Alternate gene names: NA

Gene position: 4451697-4451017 (Counterclockwise)

Preceding gene: 157963473

Following gene: 157963468

Centisome position: 86.03

GC content: 42.29

Gene sequence:

>681_bases
ATGGAAAAGTCACAAGCAGGCCTGAGTCATTACTTATCTGGGCTGTTTTTAAAGGATAGACAGGTTAGCAAACGAGTGTT
CAACTTAGTGATTGGCTTAGTGTTAATCTGGGGATTTAGCCTTAATTATCTCGCCGTTGCATATTTTCCGGTTGAAATAC
TGCAATGGATAAATCCTTGGGTCTTACTGGTAGTTGTGTTTGGCTCATTAATGGGTGGCTGCTTGATTATGCTCAAGTAC
CCACTGCCTTTGGTGAGTTTTTTAGGCTACAACCTTATGACCTTGAGTATCAGTATTACCCTGAGCCTATTCCTACAAGG
GTTTACCGCTGCTGAGGTGGCGTTAGCAGTCGAGTATACCGCAGGGATCACCTTGTTAATGATCATCACCGCAACTCTGG
TACCTAAGCTCTTTTTTAGTTTTGGCAAAGTATTGTGCGTGATTGGTGGGTGGATTGTGACGGTTGAGTTTACTTGGCTA
CTGTTCTTTGGCCATAGTCACGATATGATCCATTTGATCGTAGCACTGAGCTCGTGTGGTTACATTGGTTATACTTGGGC
TGTTGCTTGTGAGTACGGTGAAACCTTAGATGAAGCGATAGATTTTGGTGGCATGTTGTATATGCATATCATTAACTTCT
TTATTCGTATTTTGCATCTTATTGCATCGTTGCGATCGTAA

Upstream 100 bases:

>100_bases
TTGCAAAGTTAACTTTTGGTTATACAGCTAAATTTCAACCTTAGTTAAGCTGCGCAGCAGTTGGCGTATAACGTCGTATT
ATTGGTAGGAAAAAGCTTTC

Downstream 100 bases:

>100_bases
TTGGGCACGTAATGAGATTGAACAAAAAGCACAGCCTAAGCAGTGCTTTTTGTTTCTGTGCTAAGCATAGGAGTCGGCAT
TCTCAATCACGGTAGTTATA

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MEKSQAGLSHYLSGLFLKDRQVSKRVFNLVIGLVLIWGFSLNYLAVAYFPVEILQWINPWVLLVVVFGSLMGGCLIMLKY
PLPLVSFLGYNLMTLSISITLSLFLQGFTAAEVALAVEYTAGITLLMIITATLVPKLFFSFGKVLCVIGGWIVTVEFTWL
LFFGHSHDMIHLIVALSSCGYIGYTWAVACEYGETLDEAIDFGGMLYMHIINFFIRILHLIASLRS

Sequences:

>Translated_226_residues
MEKSQAGLSHYLSGLFLKDRQVSKRVFNLVIGLVLIWGFSLNYLAVAYFPVEILQWINPWVLLVVVFGSLMGGCLIMLKY
PLPLVSFLGYNLMTLSISITLSLFLQGFTAAEVALAVEYTAGITLLMIITATLVPKLFFSFGKVLCVIGGWIVTVEFTWL
LFFGHSHDMIHLIVALSSCGYIGYTWAVACEYGETLDEAIDFGGMLYMHIINFFIRILHLIASLRS
>Mature_226_residues
MEKSQAGLSHYLSGLFLKDRQVSKRVFNLVIGLVLIWGFSLNYLAVAYFPVEILQWINPWVLLVVVFGSLMGGCLIMLKY
PLPLVSFLGYNLMTLSISITLSLFLQGFTAAEVALAVEYTAGITLLMIITATLVPKLFFSFGKVLCVIGGWIVTVEFTWL
LFFGHSHDMIHLIVALSSCGYIGYTWAVACEYGETLDEAIDFGGMLYMHIINFFIRILHLIASLRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25254; Mature: 25254

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSQAGLSHYLSGLFLKDRQVSKRVFNLVIGLVLIWGFSLNYLAVAYFPVEILQWINPW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VLLVVVFGSLMGGCLIMLKYPLPLVSFLGYNLMTLSISITLSLFLQGFTAAEVALAVEYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AGITLLMIITATLVPKLFFSFGKVLCVIGGWIVTVEFTWLLFFGHSHDMIHLIVALSSCG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCHHHHHHHHHHHCC
YIGYTWAVACEYGETLDEAIDFGGMLYMHIINFFIRILHLIASLRS
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKSQAGLSHYLSGLFLKDRQVSKRVFNLVIGLVLIWGFSLNYLAVAYFPVEILQWINPW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VLLVVVFGSLMGGCLIMLKYPLPLVSFLGYNLMTLSISITLSLFLQGFTAAEVALAVEYT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AGITLLMIITATLVPKLFFSFGKVLCVIGGWIVTVEFTWLLFFGHSHDMIHLIVALSSCG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCCHHHHHHHHHHHCC
YIGYTWAVACEYGETLDEAIDFGGMLYMHIINFFIRILHLIASLRS
CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA