| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963473
Identifier: 157963473
GI number: 157963473
Start: 4452358
End: 4453680
Strand: Reverse
Name: 157963473
Synonym: Spea_3661
Alternate gene names: NA
Gene position: 4453680-4452358 (Counterclockwise)
Preceding gene: 157963475
Following gene: 157963471
Centisome position: 86.07
GC content: 43.39
Gene sequence:
>1323_bases ATGAAATTATTAATGATTACTACCAGTGCTATTGCGGCTCTATTACTGTCTGGATGCGGTAGTAAAGCGCCTTCTATCGA TTGTGACACATTTGAACGATGCTATATATTGAGCTTGATTGCGGGGCAGAAGTCACTGCAAAGCCATACTGAATTCAACC AATTAAAAGTCGTGATTGCAGTAGATTATGACGTTCAAAAAAGTACGGAAGTACAAACTAAGGTTAAAGAGTCGAGTGGC TCTACTGAGTTTGACGCACTTGCTAAGCAGTCGCTACATGATTCAGTGGCAGCCTTATTGCCCGTTTTGGCGACACTGCC CGTAGAGGAACAAGAGAAAAGTGAGTCATTCAGTACTGACTTAATAATGAAAACGGCTGACTATCCCGATGAGCCTATAA TTGAACCAGAGCCTGATTTAGTTGAAGGTTTCTTTGATAATGGCCAATTGAAATTCCGTGGTTATGAGTTAGGGTTTGAT AGAGTGGGTCATTGGCAGACTTTTTATGAGGATGGCACGCTACGTTATGATGAGCACCATCCTGCAGGAATAAGAAAGCG CTTTCATGAAAATGGTCTGCTCGCACAAGAGGGATTTTTTGACGAAGGACTCGAACAGGGAGAGTTTACAGATTACCACG ACAACGGCAACCTAAGAGCTAAGCGTAACTTTAAAGATGGTCAGATAGTCGGTTTCGCTGAAGCCTATTCTGAAGATGGC ACACTAGAGCAGCGAGCCAATTTTGATGCTAGAGGTAATGGCACACTACAAGAGTTTTGGCCTAACGGACAGCTGAAATG GGACACAGCCGTTATTAATGGTCAGCCTAGTGGTGAGCAGAAGTACTATGACCCACAAGGTGAGCGGGTGGTTGCAAAGG CGATCGCAGCGGCCAAGGTGTTTCAGCAAAGCATTACTGATAATGATATTGATACTTTTATGCGCTTTATTCTTGATGAA GAGATAATGTTTGAAGGCACAAGAGTCGCTTATCAGCGAATTATTTGGCAGTTCACCGAAAAAATGAAATCTGGCACTTT TAGTCAAGACTTAGCTTCATTTACTGAGTCCACACAAATGTTTATCGATGGTGATGAGTATTACGCTTATTTGCCTATGA CAATTCGCACACCAAGCGCAGAAGGCATGATGGCTCGAGAATCAGCTTTAGTTGGCTACTCCACAGATATCGGCAAAACG TGGAAGTTTGTTGATGCCAGCGATGGCTACGATGTGGTTGATGCCGTGCTGTTTAGTTTGCCAAGAGAATTGAGTATTCC GCTATTCCCTGAGCCTAAACTGCTAGATATGAGGAGTGAATAG
Upstream 100 bases:
>100_bases CTGAATACGTGAACTAATCCACATAAAGAAAGTAGGCTTTCCCTTAGTGCAAGGTTTTCATCTAACATGCGAACTATCTT TATCGTGAGTTTATAAAACC
Downstream 100 bases:
>100_bases CCTTTATCCGGTGTAAACCAATATAGCATCAATTAGGGCGATAAATAGCAGGCAAAAAAAGAGTAAGCGAAAGCTTACTC TTTTTCTATGGAGCCGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKLLMITTSAIAALLLSGCGSKAPSIDCDTFERCYILSLIAGQKSLQSHTEFNQLKVVIAVDYDVQKSTEVQTKVKESSG STEFDALAKQSLHDSVAALLPVLATLPVEEQEKSESFSTDLIMKTADYPDEPIIEPEPDLVEGFFDNGQLKFRGYELGFD RVGHWQTFYEDGTLRYDEHHPAGIRKRFHENGLLAQEGFFDEGLEQGEFTDYHDNGNLRAKRNFKDGQIVGFAEAYSEDG TLEQRANFDARGNGTLQEFWPNGQLKWDTAVINGQPSGEQKYYDPQGERVVAKAIAAAKVFQQSITDNDIDTFMRFILDE EIMFEGTRVAYQRIIWQFTEKMKSGTFSQDLASFTESTQMFIDGDEYYAYLPMTIRTPSAEGMMARESALVGYSTDIGKT WKFVDASDGYDVVDAVLFSLPRELSIPLFPEPKLLDMRSE
Sequences:
>Translated_440_residues MKLLMITTSAIAALLLSGCGSKAPSIDCDTFERCYILSLIAGQKSLQSHTEFNQLKVVIAVDYDVQKSTEVQTKVKESSG STEFDALAKQSLHDSVAALLPVLATLPVEEQEKSESFSTDLIMKTADYPDEPIIEPEPDLVEGFFDNGQLKFRGYELGFD RVGHWQTFYEDGTLRYDEHHPAGIRKRFHENGLLAQEGFFDEGLEQGEFTDYHDNGNLRAKRNFKDGQIVGFAEAYSEDG TLEQRANFDARGNGTLQEFWPNGQLKWDTAVINGQPSGEQKYYDPQGERVVAKAIAAAKVFQQSITDNDIDTFMRFILDE EIMFEGTRVAYQRIIWQFTEKMKSGTFSQDLASFTESTQMFIDGDEYYAYLPMTIRTPSAEGMMARESALVGYSTDIGKT WKFVDASDGYDVVDAVLFSLPRELSIPLFPEPKLLDMRSE >Mature_440_residues MKLLMITTSAIAALLLSGCGSKAPSIDCDTFERCYILSLIAGQKSLQSHTEFNQLKVVIAVDYDVQKSTEVQTKVKESSG STEFDALAKQSLHDSVAALLPVLATLPVEEQEKSESFSTDLIMKTADYPDEPIIEPEPDLVEGFFDNGQLKFRGYELGFD RVGHWQTFYEDGTLRYDEHHPAGIRKRFHENGLLAQEGFFDEGLEQGEFTDYHDNGNLRAKRNFKDGQIVGFAEAYSEDG TLEQRANFDARGNGTLQEFWPNGQLKWDTAVINGQPSGEQKYYDPQGERVVAKAIAAAKVFQQSITDNDIDTFMRFILDE EIMFEGTRVAYQRIIWQFTEKMKSGTFSQDLASFTESTQMFIDGDEYYAYLPMTIRTPSAEGMMARESALVGYSTDIGKT WKFVDASDGYDVVDAVLFSLPRELSIPLFPEPKLLDMRSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49553; Mature: 49553
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLMITTSAIAALLLSGCGSKAPSIDCDTFERCYILSLIAGQKSLQSHTEFNQLKVVIA CEEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCEEEEEEE VDYDVQKSTEVQTKVKESSGSTEFDALAKQSLHDSVAALLPVLATLPVEEQEKSESFSTD EECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHH LIMKTADYPDEPIIEPEPDLVEGFFDNGQLKFRGYELGFDRVGHWQTFYEDGTLRYDEHH EEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCEEECCCCEEECCCC PAGIRKRFHENGLLAQEGFFDEGLEQGEFTDYHDNGNLRAKRNFKDGQIVGFAEAYSEDG CHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEHHHHCCCC TLEQRANFDARGNGTLQEFWPNGQLKWDTAVINGQPSGEQKYYDPQGERVVAKAIAAAKV CHHHHCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH FQQSITDNDIDTFMRFILDEEIMFEGTRVAYQRIIWQFTEKMKSGTFSQDLASFTESTQM HHHHCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEE FIDGDEYYAYLPMTIRTPSAEGMMARESALVGYSTDIGKTWKFVDASDGYDVVDAVLFSL EEECCCEEEEEEEEEECCCCCCCHHHHCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHC PRELSIPLFPEPKLLDMRSE CHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLLMITTSAIAALLLSGCGSKAPSIDCDTFERCYILSLIAGQKSLQSHTEFNQLKVVIA CEEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHCCCCEEEEEEE VDYDVQKSTEVQTKVKESSGSTEFDALAKQSLHDSVAALLPVLATLPVEEQEKSESFSTD EECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHH LIMKTADYPDEPIIEPEPDLVEGFFDNGQLKFRGYELGFDRVGHWQTFYEDGTLRYDEHH EEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCEEECCCCEEECCCC PAGIRKRFHENGLLAQEGFFDEGLEQGEFTDYHDNGNLRAKRNFKDGQIVGFAEAYSEDG CHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEHHHHCCCC TLEQRANFDARGNGTLQEFWPNGQLKWDTAVINGQPSGEQKYYDPQGERVVAKAIAAAKV CHHHHCCCCCCCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH FQQSITDNDIDTFMRFILDEEIMFEGTRVAYQRIIWQFTEKMKSGTFSQDLASFTESTQM HHHHCCCCHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCEE FIDGDEYYAYLPMTIRTPSAEGMMARESALVGYSTDIGKTWKFVDASDGYDVVDAVLFSL EEECCCEEEEEEEEEECCCCCCCHHHHCEEEEEECCCCCEEEEEECCCCHHHHHHHHHHC PRELSIPLFPEPKLLDMRSE CHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA