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The map label for this gene is yfdH [C]

Identifier: 157963441

GI number: 157963441

Start: 4418363

End: 4419400

Strand: Reverse

Name: yfdH [C]

Synonym: Spea_3629

Alternate gene names: 157963441

Gene position: 4419400-4418363 (Counterclockwise)

Preceding gene: 157963444

Following gene: 157963440

Centisome position: 85.41

GC content: 47.4

Gene sequence:

>1038_bases
ATGTCGTACTCCTCACCCGATCAAACCAATTCTCATAGCGAAATCTGCCTGTCTGTCGTCGTGCCCTTATTTAATGAATC
TAAAATGATAAAGCCGTTAATTGAACGCTTAACTGCGGTGCTTTCAAGGCTTGATGATAGTAGCGAAATCGTGTTTGTCG
ATGACGGTAGCAGTGATGACTCTTGGTCACAGGTGAGTCAATTGCCGCTAGTAGACAATGAATACCAGTGTATCAAGTTA
AGCCGTAACTTTGGTAAAGAAGCGGCGATGTCAGCTGGGATCGAACATGCCAGAGGTTTGGTGGTGATCATGCTGGATGC
GGATCTGCAAGATCCACCTGAATTGCTCCCTGAGATGTTGGCGCAGTGGCGAGCGGGATACGATATCGTCAATATGAAGC
GCAGAAAGCGCTTGGGAGAGACTTGGTTTAAGCGTTTCTCTGCGGGTTGTTTTTATAAGCTGATGAATTGGGTTTCAGAT
TCGCCGGTGCCAGAAAATGTTGGCGATTTTCGTCTGATGAGCCGTCAGGTTATCGATAGTATTAAGGCGCTTCCTGAGCG
CAACCGCTTTATGAAGGGACTGTTTAGCTGGCCCGGTTTTTCGCAGAAAACCTTAGAGTTTGACCGAGACCCACGTTTTA
TTGGGGAAACCAAGTGGAATTACGGCAAGTTGTTCGGTCTTGCAATGGATGGCATCACCTCTTTTAGCTTTAAACCTTTG
AGATTGGCGACCTGGTGTGGGGTATTAACGGCCTTATGCGCCTTTGGCTATGGTGGTTGGATAGTGGTTCAGACCTTGAT
ATTTGGCGGCAGTGTTGCGGGCTACCCGTCACTGATGGTGGTGCAGTTGGCGCTTGCGGGGATCCAGCTTTTAGCTCTTG
GCCTCATTGGTGAGTATTTAGGGCGAGTGTTTGTCGAGGTGAAACAAAGGCCTCTGTACTTAATTGAAGAGGTCGCCTAT
CGACACTCATTAGCTCAAGTACAAGCCAGAAATAGCGATATAAAACAGGACAACGTAAGTTACTTGGGGGCTAAATAA

Upstream 100 bases:

>100_bases
TTAGATATTACCACTTTTTATGTGGAAAAAATGTCAATGACATTTTGTTCACCTCCACTTAGGCATGCTAGCGGAAAAAT
AAGCCATTGCAGGATAAAAC

Downstream 100 bases:

>100_bases
TGTTGAGTATGCGCGATAGTCAAAAGGGGTTAGCGGTACTCTTGATTGTGGTTCTCACTCGGTTATTACTATTGCCTTGG
TATCCACTTATGGACACCAC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSYSSPDQTNSHSEICLSVVVPLFNESKMIKPLIERLTAVLSRLDDSSEIVFVDDGSSDDSWSQVSQLPLVDNEYQCIKL
SRNFGKEAAMSAGIEHARGLVVIMLDADLQDPPELLPEMLAQWRAGYDIVNMKRRKRLGETWFKRFSAGCFYKLMNWVSD
SPVPENVGDFRLMSRQVIDSIKALPERNRFMKGLFSWPGFSQKTLEFDRDPRFIGETKWNYGKLFGLAMDGITSFSFKPL
RLATWCGVLTALCAFGYGGWIVVQTLIFGGSVAGYPSLMVVQLALAGIQLLALGLIGEYLGRVFVEVKQRPLYLIEEVAY
RHSLAQVQARNSDIKQDNVSYLGAK

Sequences:

>Translated_345_residues
MSYSSPDQTNSHSEICLSVVVPLFNESKMIKPLIERLTAVLSRLDDSSEIVFVDDGSSDDSWSQVSQLPLVDNEYQCIKL
SRNFGKEAAMSAGIEHARGLVVIMLDADLQDPPELLPEMLAQWRAGYDIVNMKRRKRLGETWFKRFSAGCFYKLMNWVSD
SPVPENVGDFRLMSRQVIDSIKALPERNRFMKGLFSWPGFSQKTLEFDRDPRFIGETKWNYGKLFGLAMDGITSFSFKPL
RLATWCGVLTALCAFGYGGWIVVQTLIFGGSVAGYPSLMVVQLALAGIQLLALGLIGEYLGRVFVEVKQRPLYLIEEVAY
RHSLAQVQARNSDIKQDNVSYLGAK
>Mature_344_residues
SYSSPDQTNSHSEICLSVVVPLFNESKMIKPLIERLTAVLSRLDDSSEIVFVDDGSSDDSWSQVSQLPLVDNEYQCIKLS
RNFGKEAAMSAGIEHARGLVVIMLDADLQDPPELLPEMLAQWRAGYDIVNMKRRKRLGETWFKRFSAGCFYKLMNWVSDS
PVPENVGDFRLMSRQVIDSIKALPERNRFMKGLFSWPGFSQKTLEFDRDPRFIGETKWNYGKLFGLAMDGITSFSFKPLR
LATWCGVLTALCAFGYGGWIVVQTLIFGGSVAGYPSLMVVQLALAGIQLLALGLIGEYLGRVFVEVKQRPLYLIEEVAYR
HSLAQVQARNSDIKQDNVSYLGAK

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=303, Percent_Identity=46.5346534653465, Blast_Score=282, Evalue=2e-77,
Organism=Escherichia coli, GI1788588, Length=311, Percent_Identity=31.8327974276527, Blast_Score=179, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6325441, Length=107, Percent_Identity=36.4485981308411, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 38781; Mature: 38650

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYSSPDQTNSHSEICLSVVVPLFNESKMIKPLIERLTAVLSRLDDSSEIVFVDDGSSDD
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
SWSQVSQLPLVDNEYQCIKLSRNFGKEAAMSAGIEHARGLVVIMLDADLQDPPELLPEML
HHHHHHHCCCCCCCHHHEEEHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHH
AQWRAGYDIVNMKRRKRLGETWFKRFSAGCFYKLMNWVSDSPVPENVGDFRLMSRQVIDS
HHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
IKALPERNRFMKGLFSWPGFSQKTLEFDRDPRFIGETKWNYGKLFGLAMDGITSFSFKPL
HHHCHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH
RLATWCGVLTALCAFGYGGWIVVQTLIFGGSVAGYPSLMVVQLALAGIQLLALGLIGEYL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GRVFVEVKQRPLYLIEEVAYRHSLAQVQARNSDIKQDNVSYLGAK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
>Mature Secondary Structure 
SYSSPDQTNSHSEICLSVVVPLFNESKMIKPLIERLTAVLSRLDDSSEIVFVDDGSSDD
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC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HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]