Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963438

Identifier: 157963438

GI number: 157963438

Start: 4414841

End: 4416376

Strand: Reverse

Name: 157963438

Synonym: Spea_3626

Alternate gene names: NA

Gene position: 4416376-4414841 (Counterclockwise)

Preceding gene: 157963439

Following gene: 157963436

Centisome position: 85.35

GC content: 45.57

Gene sequence:

>1536_bases
ATGATTTTTTCGAATATGAGATCGATTTTAAATGGAGGCGGCGCTGCCTTGTTGCTCTGTTCTACATTGCCATTATCGGC
TTTGGCGGCCTCGGGGGCGACATTAAGTTTTACCGAGTCGGCTATCGATGCACCTTTTGAGCTGACTCACCCGATCATTG
CTGCTGACCTGTTACCTGAGCCGGGAAAAGAGCTGGTGATATTGGGTGTAGATGGCTTAAGTCATCGTTGGATGGCTATT
TACGCATTTGAAAAGGGGCAATATCAACTTGCAATGAAGCGAGAGCTTCCTCAAGAGTTACACAGTTTCGATATAACAGA
GTCTACAGCGGGTGAACTGCAGCAATTGTATTTCCTATCTCAAGACGAGCTCAAGCTCTTAGTTAGCAAGGAAAATAGCT
CTGAGCTGTATATTGAAACAGTGGCCAAGATTAATTCGTTATCTTTTAAAGACCGGCCCGACTTTATCAGCCGCGGTGAT
TTTATTCAGGATCTTAATGGCGATCTACGTGATGACATCTTGATCCATGATTTCAATCAGGTGCACCTATTCTTAGCGGG
TGAACAAGGCTTTGGGCGTCAAACTCTACCGATTAAGCCACAATCTCGATTATTTGATGATGGCGCTACATATACCCAAT
CTAAACTCTATGTCTCTGACATCAATTTAGATGGCTTGGTGGATATCGTTAAGATAGGTGAGGGCGAGTTAGAGGTCTAT
AAGCAGACGCAAGCTAGAGGCTTCGATCCTATTGCCGAGTTTATCTCTGTGCGCCAACCTATTAGTGGTGTCGATTGGTG
GAATAAACGCGACGCCTTTGGTGAGCAATTAGATCAAAGCGAGCTTGTTTATCGTAAGGTAGAGCAGCTTAAAGATCTCA
ACGCCGATGGTGTTACCGATATGGTGATCCGCTATACCAAAAGTAGCGGCGTATTCGATAGGGTAAACGATTATGAGATC
TATCTCGGTGAAAACAACAAGGGGGTGTTGGTTTTCCCTAAAGAAGCTAGCAGTGTGATCAGGGCCGAAGGCACCTTAAC
TGGACTGGAGTTTGTCGATATCGACAGTGACGATAAAGATGAGGTGATGGTCGCAGGCTTTGATATCGGTGTGTCACAGA
TTATTGGTGCGTTGCTTTCGGGCAGTATCGACCAAGATGTGCATCTATTTAAGATGGACTCTACAGGCCGTTTTAGCGAC
GACTCCAACGTGACAAAAGAGGTGGAGCTTAACTTTAGCTTTAGCTCGGGACAAGCTGGCAGCCCTGTGGTCAAGCTTGC
GGATCTAAATGGTGATGGGCTAAAAGATCTGTTGCTGTCAGAGGATGAGTCGACCTTGAAAGTCTATTTAGGTAAGCGTG
GTGATGGGTTGTTTAGTCGTGATGCACAAGAGCATGAGCTGAAACTACCTATCGAAGGGGGCATGTTAAAGGCGGAGGAT
CTAAATGGTGATGGCAGAGAAGATCTGCTGATCAAGTATGGTCGCCAAGATGATAAAAAGCTCTCTAAGCAGTTCAGGGT
GTTATTAGCCAGTTAG

Upstream 100 bases:

>100_bases
AGCCAAGCTTATGTTACAAACTGTTAACGAGTGGTTTTACTCTTGCTCGAAAACCGCTAGTTTCATACTCTAGAGTAATA
ATGCAGAGGTAATGGCTAGG

Downstream 100 bases:

>100_bases
CCAATACTGTCCCTGTATCGATAACTATAAAGCGACTCTAATCGGGTCGCTTTTTTATTGCAGCACGTGATGGGGTGCAG
AGGCGAAATTCACATTAAGC

Product: FG-GAP repeat-containing protein

Products: NA

Alternate protein names: FG-GAP Repeat Lipoprotein

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MIFSNMRSILNGGGAALLLCSTLPLSALAASGATLSFTESAIDAPFELTHPIIAADLLPEPGKELVILGVDGLSHRWMAI
YAFEKGQYQLAMKRELPQELHSFDITESTAGELQQLYFLSQDELKLLVSKENSSELYIETVAKINSLSFKDRPDFISRGD
FIQDLNGDLRDDILIHDFNQVHLFLAGEQGFGRQTLPIKPQSRLFDDGATYTQSKLYVSDINLDGLVDIVKIGEGELEVY
KQTQARGFDPIAEFISVRQPISGVDWWNKRDAFGEQLDQSELVYRKVEQLKDLNADGVTDMVIRYTKSSGVFDRVNDYEI
YLGENNKGVLVFPKEASSVIRAEGTLTGLEFVDIDSDDKDEVMVAGFDIGVSQIIGALLSGSIDQDVHLFKMDSTGRFSD
DSNVTKEVELNFSFSSGQAGSPVVKLADLNGDGLKDLLLSEDESTLKVYLGKRGDGLFSRDAQEHELKLPIEGGMLKAED
LNGDGREDLLIKYGRQDDKKLSKQFRVLLAS

Sequences:

>Translated_511_residues
MIFSNMRSILNGGGAALLLCSTLPLSALAASGATLSFTESAIDAPFELTHPIIAADLLPEPGKELVILGVDGLSHRWMAI
YAFEKGQYQLAMKRELPQELHSFDITESTAGELQQLYFLSQDELKLLVSKENSSELYIETVAKINSLSFKDRPDFISRGD
FIQDLNGDLRDDILIHDFNQVHLFLAGEQGFGRQTLPIKPQSRLFDDGATYTQSKLYVSDINLDGLVDIVKIGEGELEVY
KQTQARGFDPIAEFISVRQPISGVDWWNKRDAFGEQLDQSELVYRKVEQLKDLNADGVTDMVIRYTKSSGVFDRVNDYEI
YLGENNKGVLVFPKEASSVIRAEGTLTGLEFVDIDSDDKDEVMVAGFDIGVSQIIGALLSGSIDQDVHLFKMDSTGRFSD
DSNVTKEVELNFSFSSGQAGSPVVKLADLNGDGLKDLLLSEDESTLKVYLGKRGDGLFSRDAQEHELKLPIEGGMLKAED
LNGDGREDLLIKYGRQDDKKLSKQFRVLLAS
>Mature_511_residues
MIFSNMRSILNGGGAALLLCSTLPLSALAASGATLSFTESAIDAPFELTHPIIAADLLPEPGKELVILGVDGLSHRWMAI
YAFEKGQYQLAMKRELPQELHSFDITESTAGELQQLYFLSQDELKLLVSKENSSELYIETVAKINSLSFKDRPDFISRGD
FIQDLNGDLRDDILIHDFNQVHLFLAGEQGFGRQTLPIKPQSRLFDDGATYTQSKLYVSDINLDGLVDIVKIGEGELEVY
KQTQARGFDPIAEFISVRQPISGVDWWNKRDAFGEQLDQSELVYRKVEQLKDLNADGVTDMVIRYTKSSGVFDRVNDYEI
YLGENNKGVLVFPKEASSVIRAEGTLTGLEFVDIDSDDKDEVMVAGFDIGVSQIIGALLSGSIDQDVHLFKMDSTGRFSD
DSNVTKEVELNFSFSSGQAGSPVVKLADLNGDGLKDLLLSEDESTLKVYLGKRGDGLFSRDAQEHELKLPIEGGMLKAED
LNGDGREDLLIKYGRQDDKKLSKQFRVLLAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56567; Mature: 56567

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSNMRSILNGGGAALLLCSTLPLSALAASGATLSFTESAIDAPFELTHPIIAADLLPE
CCHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCEEEECHHHCCCCHHHCCCCHHHHCCCC
PGKELVILGVDGLSHRWMAIYAFEKGQYQLAMKRELPQELHSFDITESTAGELQQLYFLS
CCCCEEEEECCCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
QDELKLLVSKENSSELYIETVAKINSLSFKDRPDFISRGDFIQDLNGDLRDDILIHDFNQ
CCCEEEEEECCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCE
VHLFLAGEQGFGRQTLPIKPQSRLFDDGATYTQSKLYVSDINLDGLVDIVKIGEGELEVY
EEEEEECCCCCCCCCCCCCCHHHCCCCCCCEEECEEEEEECCCCCCEEEEECCCCHHEEH
KQTQARGFDPIAEFISVRQPISGVDWWNKRDAFGEQLDQSELVYRKVEQLKDLNADGVTD
HHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEE
MVIRYTKSSGVFDRVNDYEIYLGENNKGVLVFPKEASSVIRAEGTLTGLEFVDIDSDDKD
EEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEECCCEECEEEEECCCCCCC
EVMVAGFDIGVSQIIGALLSGSIDQDVHLFKMDSTGRFSDDSNVTKEVELNFSFSSGQAG
CEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCC
SPVVKLADLNGDGLKDLLLSEDESTLKVYLGKRGDGLFSRDAQEHELKLPIEGGMLKAED
CCEEEEEECCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEC
LNGDGREDLLIKYGRQDDKKLSKQFRVLLAS
CCCCCCCCEEEECCCCHHHHHHHHHHHEECC
>Mature Secondary Structure
MIFSNMRSILNGGGAALLLCSTLPLSALAASGATLSFTESAIDAPFELTHPIIAADLLPE
CCHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCEEEECHHHCCCCHHHCCCCHHHHCCCC
PGKELVILGVDGLSHRWMAIYAFEKGQYQLAMKRELPQELHSFDITESTAGELQQLYFLS
CCCCEEEEECCCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
QDELKLLVSKENSSELYIETVAKINSLSFKDRPDFISRGDFIQDLNGDLRDDILIHDFNQ
CCCEEEEEECCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCE
VHLFLAGEQGFGRQTLPIKPQSRLFDDGATYTQSKLYVSDINLDGLVDIVKIGEGELEVY
EEEEEECCCCCCCCCCCCCCHHHCCCCCCCEEECEEEEEECCCCCCEEEEECCCCHHEEH
KQTQARGFDPIAEFISVRQPISGVDWWNKRDAFGEQLDQSELVYRKVEQLKDLNADGVTD
HHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEE
MVIRYTKSSGVFDRVNDYEIYLGENNKGVLVFPKEASSVIRAEGTLTGLEFVDIDSDDKD
EEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEECCCEECEEEEECCCCCCC
EVMVAGFDIGVSQIIGALLSGSIDQDVHLFKMDSTGRFSDDSNVTKEVELNFSFSSGQAG
CEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCC
SPVVKLADLNGDGLKDLLLSEDESTLKVYLGKRGDGLFSRDAQEHELKLPIEGGMLKAED
CCEEEEEECCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEC
LNGDGREDLLIKYGRQDDKKLSKQFRVLLAS
CCCCCCCCEEEECCCCHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA