| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963438
Identifier: 157963438
GI number: 157963438
Start: 4414841
End: 4416376
Strand: Reverse
Name: 157963438
Synonym: Spea_3626
Alternate gene names: NA
Gene position: 4416376-4414841 (Counterclockwise)
Preceding gene: 157963439
Following gene: 157963436
Centisome position: 85.35
GC content: 45.57
Gene sequence:
>1536_bases ATGATTTTTTCGAATATGAGATCGATTTTAAATGGAGGCGGCGCTGCCTTGTTGCTCTGTTCTACATTGCCATTATCGGC TTTGGCGGCCTCGGGGGCGACATTAAGTTTTACCGAGTCGGCTATCGATGCACCTTTTGAGCTGACTCACCCGATCATTG CTGCTGACCTGTTACCTGAGCCGGGAAAAGAGCTGGTGATATTGGGTGTAGATGGCTTAAGTCATCGTTGGATGGCTATT TACGCATTTGAAAAGGGGCAATATCAACTTGCAATGAAGCGAGAGCTTCCTCAAGAGTTACACAGTTTCGATATAACAGA GTCTACAGCGGGTGAACTGCAGCAATTGTATTTCCTATCTCAAGACGAGCTCAAGCTCTTAGTTAGCAAGGAAAATAGCT CTGAGCTGTATATTGAAACAGTGGCCAAGATTAATTCGTTATCTTTTAAAGACCGGCCCGACTTTATCAGCCGCGGTGAT TTTATTCAGGATCTTAATGGCGATCTACGTGATGACATCTTGATCCATGATTTCAATCAGGTGCACCTATTCTTAGCGGG TGAACAAGGCTTTGGGCGTCAAACTCTACCGATTAAGCCACAATCTCGATTATTTGATGATGGCGCTACATATACCCAAT CTAAACTCTATGTCTCTGACATCAATTTAGATGGCTTGGTGGATATCGTTAAGATAGGTGAGGGCGAGTTAGAGGTCTAT AAGCAGACGCAAGCTAGAGGCTTCGATCCTATTGCCGAGTTTATCTCTGTGCGCCAACCTATTAGTGGTGTCGATTGGTG GAATAAACGCGACGCCTTTGGTGAGCAATTAGATCAAAGCGAGCTTGTTTATCGTAAGGTAGAGCAGCTTAAAGATCTCA ACGCCGATGGTGTTACCGATATGGTGATCCGCTATACCAAAAGTAGCGGCGTATTCGATAGGGTAAACGATTATGAGATC TATCTCGGTGAAAACAACAAGGGGGTGTTGGTTTTCCCTAAAGAAGCTAGCAGTGTGATCAGGGCCGAAGGCACCTTAAC TGGACTGGAGTTTGTCGATATCGACAGTGACGATAAAGATGAGGTGATGGTCGCAGGCTTTGATATCGGTGTGTCACAGA TTATTGGTGCGTTGCTTTCGGGCAGTATCGACCAAGATGTGCATCTATTTAAGATGGACTCTACAGGCCGTTTTAGCGAC GACTCCAACGTGACAAAAGAGGTGGAGCTTAACTTTAGCTTTAGCTCGGGACAAGCTGGCAGCCCTGTGGTCAAGCTTGC GGATCTAAATGGTGATGGGCTAAAAGATCTGTTGCTGTCAGAGGATGAGTCGACCTTGAAAGTCTATTTAGGTAAGCGTG GTGATGGGTTGTTTAGTCGTGATGCACAAGAGCATGAGCTGAAACTACCTATCGAAGGGGGCATGTTAAAGGCGGAGGAT CTAAATGGTGATGGCAGAGAAGATCTGCTGATCAAGTATGGTCGCCAAGATGATAAAAAGCTCTCTAAGCAGTTCAGGGT GTTATTAGCCAGTTAG
Upstream 100 bases:
>100_bases AGCCAAGCTTATGTTACAAACTGTTAACGAGTGGTTTTACTCTTGCTCGAAAACCGCTAGTTTCATACTCTAGAGTAATA ATGCAGAGGTAATGGCTAGG
Downstream 100 bases:
>100_bases CCAATACTGTCCCTGTATCGATAACTATAAAGCGACTCTAATCGGGTCGCTTTTTTATTGCAGCACGTGATGGGGTGCAG AGGCGAAATTCACATTAAGC
Product: FG-GAP repeat-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Lipoprotein
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MIFSNMRSILNGGGAALLLCSTLPLSALAASGATLSFTESAIDAPFELTHPIIAADLLPEPGKELVILGVDGLSHRWMAI YAFEKGQYQLAMKRELPQELHSFDITESTAGELQQLYFLSQDELKLLVSKENSSELYIETVAKINSLSFKDRPDFISRGD FIQDLNGDLRDDILIHDFNQVHLFLAGEQGFGRQTLPIKPQSRLFDDGATYTQSKLYVSDINLDGLVDIVKIGEGELEVY KQTQARGFDPIAEFISVRQPISGVDWWNKRDAFGEQLDQSELVYRKVEQLKDLNADGVTDMVIRYTKSSGVFDRVNDYEI YLGENNKGVLVFPKEASSVIRAEGTLTGLEFVDIDSDDKDEVMVAGFDIGVSQIIGALLSGSIDQDVHLFKMDSTGRFSD DSNVTKEVELNFSFSSGQAGSPVVKLADLNGDGLKDLLLSEDESTLKVYLGKRGDGLFSRDAQEHELKLPIEGGMLKAED LNGDGREDLLIKYGRQDDKKLSKQFRVLLAS
Sequences:
>Translated_511_residues MIFSNMRSILNGGGAALLLCSTLPLSALAASGATLSFTESAIDAPFELTHPIIAADLLPEPGKELVILGVDGLSHRWMAI YAFEKGQYQLAMKRELPQELHSFDITESTAGELQQLYFLSQDELKLLVSKENSSELYIETVAKINSLSFKDRPDFISRGD FIQDLNGDLRDDILIHDFNQVHLFLAGEQGFGRQTLPIKPQSRLFDDGATYTQSKLYVSDINLDGLVDIVKIGEGELEVY KQTQARGFDPIAEFISVRQPISGVDWWNKRDAFGEQLDQSELVYRKVEQLKDLNADGVTDMVIRYTKSSGVFDRVNDYEI YLGENNKGVLVFPKEASSVIRAEGTLTGLEFVDIDSDDKDEVMVAGFDIGVSQIIGALLSGSIDQDVHLFKMDSTGRFSD DSNVTKEVELNFSFSSGQAGSPVVKLADLNGDGLKDLLLSEDESTLKVYLGKRGDGLFSRDAQEHELKLPIEGGMLKAED LNGDGREDLLIKYGRQDDKKLSKQFRVLLAS >Mature_511_residues MIFSNMRSILNGGGAALLLCSTLPLSALAASGATLSFTESAIDAPFELTHPIIAADLLPEPGKELVILGVDGLSHRWMAI YAFEKGQYQLAMKRELPQELHSFDITESTAGELQQLYFLSQDELKLLVSKENSSELYIETVAKINSLSFKDRPDFISRGD FIQDLNGDLRDDILIHDFNQVHLFLAGEQGFGRQTLPIKPQSRLFDDGATYTQSKLYVSDINLDGLVDIVKIGEGELEVY KQTQARGFDPIAEFISVRQPISGVDWWNKRDAFGEQLDQSELVYRKVEQLKDLNADGVTDMVIRYTKSSGVFDRVNDYEI YLGENNKGVLVFPKEASSVIRAEGTLTGLEFVDIDSDDKDEVMVAGFDIGVSQIIGALLSGSIDQDVHLFKMDSTGRFSD DSNVTKEVELNFSFSSGQAGSPVVKLADLNGDGLKDLLLSEDESTLKVYLGKRGDGLFSRDAQEHELKLPIEGGMLKAED LNGDGREDLLIKYGRQDDKKLSKQFRVLLAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56567; Mature: 56567
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFSNMRSILNGGGAALLLCSTLPLSALAASGATLSFTESAIDAPFELTHPIIAADLLPE CCHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCEEEECHHHCCCCHHHCCCCHHHHCCCC PGKELVILGVDGLSHRWMAIYAFEKGQYQLAMKRELPQELHSFDITESTAGELQQLYFLS CCCCEEEEECCCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC QDELKLLVSKENSSELYIETVAKINSLSFKDRPDFISRGDFIQDLNGDLRDDILIHDFNQ CCCEEEEEECCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCE VHLFLAGEQGFGRQTLPIKPQSRLFDDGATYTQSKLYVSDINLDGLVDIVKIGEGELEVY EEEEEECCCCCCCCCCCCCCHHHCCCCCCCEEECEEEEEECCCCCCEEEEECCCCHHEEH KQTQARGFDPIAEFISVRQPISGVDWWNKRDAFGEQLDQSELVYRKVEQLKDLNADGVTD HHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEE MVIRYTKSSGVFDRVNDYEIYLGENNKGVLVFPKEASSVIRAEGTLTGLEFVDIDSDDKD EEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEECCCEECEEEEECCCCCCC EVMVAGFDIGVSQIIGALLSGSIDQDVHLFKMDSTGRFSDDSNVTKEVELNFSFSSGQAG CEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCC SPVVKLADLNGDGLKDLLLSEDESTLKVYLGKRGDGLFSRDAQEHELKLPIEGGMLKAED CCEEEEEECCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEC LNGDGREDLLIKYGRQDDKKLSKQFRVLLAS CCCCCCCCEEEECCCCHHHHHHHHHHHEECC >Mature Secondary Structure MIFSNMRSILNGGGAALLLCSTLPLSALAASGATLSFTESAIDAPFELTHPIIAADLLPE CCHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCEEEECHHHCCCCHHHCCCCHHHHCCCC PGKELVILGVDGLSHRWMAIYAFEKGQYQLAMKRELPQELHSFDITESTAGELQQLYFLS CCCCEEEEECCCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC QDELKLLVSKENSSELYIETVAKINSLSFKDRPDFISRGDFIQDLNGDLRDDILIHDFNQ CCCEEEEEECCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCE VHLFLAGEQGFGRQTLPIKPQSRLFDDGATYTQSKLYVSDINLDGLVDIVKIGEGELEVY EEEEEECCCCCCCCCCCCCCHHHCCCCCCCEEECEEEEEECCCCCCEEEEECCCCHHEEH KQTQARGFDPIAEFISVRQPISGVDWWNKRDAFGEQLDQSELVYRKVEQLKDLNADGVTD HHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEE MVIRYTKSSGVFDRVNDYEIYLGENNKGVLVFPKEASSVIRAEGTLTGLEFVDIDSDDKD EEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEECCCEECEEEEECCCCCCC EVMVAGFDIGVSQIIGALLSGSIDQDVHLFKMDSTGRFSDDSNVTKEVELNFSFSSGQAG CEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCC SPVVKLADLNGDGLKDLLLSEDESTLKVYLGKRGDGLFSRDAQEHELKLPIEGGMLKAED CCEEEEEECCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEC LNGDGREDLLIKYGRQDDKKLSKQFRVLLAS CCCCCCCCEEEECCCCHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA