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The map label for this gene is ybeF [C]

Identifier: 157963386

GI number: 157963386

Start: 4358243

End: 4359220

Strand: Reverse

Name: ybeF [C]

Synonym: Spea_3572

Alternate gene names: 157963386

Gene position: 4359220-4358243 (Counterclockwise)

Preceding gene: 157963388

Following gene: 157963385

Centisome position: 84.24

GC content: 39.67

Gene sequence:

>978_bases
ATGAGTAAGTTAAGCGTTAATAGTCTATTTGATATTCAAGTCTTTGTTTTATTGTATGAGTCACTCAATGCGACTGCCGT
TAGTCAAACGTTAGGTGTGCCGAGCTCTAAAATCAGCCGTAGCCTTAAGTCGTTAAGGCACTCTTTGAATGCGCCGCTGT
TTATTCGTAAACAACAAGGGTTTGAGGCCAGCGACTTGGCAAACGATATCTATCCTAAAATGAAGCGTATCGTTGAGCTT
GCTAAACACTGTGAAAAGATTGAAGTGGGTACAGATAACTTGCGTACTCGTAAGCTGGTTATTGCTTGCCCACCGACATT
ATCGCTAAACCTGCTTAATCATTTACAAGCTAGGGCCTGTGAGGATCAAGAATCTTTTCTTTTTCATATTAAACCTTGTA
CGAGCAATGTGGCTGAGCTTATAAAGCAGCAACATGTTGATATTGCAGTAACTTATAGCGCTTACAATACTGAACAATTG
ACATCAAGTTTAATTGCAACATCAAGTAACTATGTGTTGGTTGCCAAACAAGGGCACCCATTGTTGAGCCGCCAACAGTC
TTTGGAACTTGATGATATATTTGATTACCCATACATAAGTTTTTCAGGTAATGAGCTCAACGATGTGATTGATCCGCTGG
AGTGCTACGCCTTAGATGTCGAACGTAAATTAAAGTTAGTTGTGAAAGTTTGTTTTTTAGCTGATCTCATGCTGCAGCTA
GAGCAGAGCGATGCTATTGCACTTTTAAGCCATTTGGATGCCGTTGAGTTTTTATGTCAGCGAGGCAATATTGGCGCATT
AAAATTAGAGAGAAGCTTATGTGAATCGATCAATCAAAGAAGTGGTCGATACCATTATTATTTGACGCAGATGCGTAAGA
ATACAGCTTCTCCTAGCTGGGTAGGCAAAGAGATCCATCGTTATATTCAAGCAAATATAACCTCAGATAGTGAAGGCTAT
AATGAAGAGATTAAGTAG

Upstream 100 bases:

>100_bases
ATAATATGAAAATCACGAAAATAAACGCAATTTATACGTAATGCATAGTGAATGGTTTAGATTGCTTAATTAGGGATTCA
GCACATTACTTTGAGGGCAA

Downstream 100 bases:

>100_bases
TGTTAGTCTTTCTAGCATAGAAATATTTTGCCAACTTTACATTAAAAATAGTACCAAAGAAGTGGCACTTGCGCTGGGGA
CTTCACAGCCTAAGGTGAGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator-Like Protein; Transcriptional Regulator LysR Family; Regulatory Protein LysR

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSKLSVNSLFDIQVFVLLYESLNATAVSQTLGVPSSKISRSLKSLRHSLNAPLFIRKQQGFEASDLANDIYPKMKRIVEL
AKHCEKIEVGTDNLRTRKLVIACPPTLSLNLLNHLQARACEDQESFLFHIKPCTSNVAELIKQQHVDIAVTYSAYNTEQL
TSSLIATSSNYVLVAKQGHPLLSRQQSLELDDIFDYPYISFSGNELNDVIDPLECYALDVERKLKLVVKVCFLADLMLQL
EQSDAIALLSHLDAVEFLCQRGNIGALKLERSLCESINQRSGRYHYYLTQMRKNTASPSWVGKEIHRYIQANITSDSEGY
NEEIK

Sequences:

>Translated_325_residues
MSKLSVNSLFDIQVFVLLYESLNATAVSQTLGVPSSKISRSLKSLRHSLNAPLFIRKQQGFEASDLANDIYPKMKRIVEL
AKHCEKIEVGTDNLRTRKLVIACPPTLSLNLLNHLQARACEDQESFLFHIKPCTSNVAELIKQQHVDIAVTYSAYNTEQL
TSSLIATSSNYVLVAKQGHPLLSRQQSLELDDIFDYPYISFSGNELNDVIDPLECYALDVERKLKLVVKVCFLADLMLQL
EQSDAIALLSHLDAVEFLCQRGNIGALKLERSLCESINQRSGRYHYYLTQMRKNTASPSWVGKEIHRYIQANITSDSEGY
NEEIK
>Mature_324_residues
SKLSVNSLFDIQVFVLLYESLNATAVSQTLGVPSSKISRSLKSLRHSLNAPLFIRKQQGFEASDLANDIYPKMKRIVELA
KHCEKIEVGTDNLRTRKLVIACPPTLSLNLLNHLQARACEDQESFLFHIKPCTSNVAELIKQQHVDIAVTYSAYNTEQLT
SSLIATSSNYVLVAKQGHPLLSRQQSLELDDIFDYPYISFSGNELNDVIDPLECYALDVERKLKLVVKVCFLADLMLQLE
QSDAIALLSHLDAVEFLCQRGNIGALKLERSLCESINQRSGRYHYYLTQMRKNTASPSWVGKEIHRYIQANITSDSEGYN
EEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36703; Mature: 36572

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLSVNSLFDIQVFVLLYESLNATAVSQTLGVPSSKISRSLKSLRHSLNAPLFIRKQQG
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCC
FEASDLANDIYPKMKRIVELAKHCEKIEVGTDNLRTRKLVIACPPTLSLNLLNHLQARAC
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCC
EDQESFLFHIKPCTSNVAELIKQQHVDIAVTYSAYNTEQLTSSLIATSSNYVLVAKQGHP
CCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCC
LLSRQQSLELDDIFDYPYISFSGNELNDVIDPLECYALDVERKLKLVVKVCFLADLMLQL
HHHHHHCCCHHHHCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQSDAIALLSHLDAVEFLCQRGNIGALKLERSLCESINQRSGRYHYYLTQMRKNTASPSW
HCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCHH
VGKEIHRYIQANITSDSEGYNEEIK
HHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKLSVNSLFDIQVFVLLYESLNATAVSQTLGVPSSKISRSLKSLRHSLNAPLFIRKQQG
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCC
FEASDLANDIYPKMKRIVELAKHCEKIEVGTDNLRTRKLVIACPPTLSLNLLNHLQARAC
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCC
EDQESFLFHIKPCTSNVAELIKQQHVDIAVTYSAYNTEQLTSSLIATSSNYVLVAKQGHP
CCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCC
LLSRQQSLELDDIFDYPYISFSGNELNDVIDPLECYALDVERKLKLVVKVCFLADLMLQL
HHHHHHCCCHHHHCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQSDAIALLSHLDAVEFLCQRGNIGALKLERSLCESINQRSGRYHYYLTQMRKNTASPSW
HCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCHH
VGKEIHRYIQANITSDSEGYNEEIK
HHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA