| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963340
Identifier: 157963340
GI number: 157963340
Start: 4308799
End: 4309626
Strand: Reverse
Name: 157963340
Synonym: Spea_3526
Alternate gene names: NA
Gene position: 4309626-4308799 (Counterclockwise)
Preceding gene: 157963341
Following gene: 157963339
Centisome position: 83.28
GC content: 46.62
Gene sequence:
>828_bases ATGAAAATGAACTGGTTATTTTCGATGCGGTTAGCCTTTGTGCTGCTACTGCTGTTGTCTGTGTGGTTTGCACTTGGCGT AGCCATGAGTGAACAAGATGCTTATCGGCAAGTACTGCGCTCACTGAACGATCTGCCAATGTCGCAGTGGATGCAGAGTT TAGCTAATGCGCCTATTGTGGCAAGTTGGCTTGTTGGCCTATTTGGTTTGATGTTTTTACTTGGGCTAAACACCGCACTG TGTTCTTGGCGCGATCTGCTGCCGACTTGGCGCCATAAGCGCTGGCGTAGCCCACGGATCATGATGCTACCGATCCATAT TCTGACCTTATTGGTGTTTATTTTCCACGGTGTCGATTTAGTGTTTATTCATGGCCACGACAGCGTAGTGCTGCATCAAG GTGAGCGTATTAACAGTGGTCGTTACCAAATCGAGTTAGTCAAAGTGGATTACCGCAATGATGTCAGCCAAATTATCGAA GATGAAGAAGGTTTTAGCCCGGCAGGCCGTATCACTCGTCGTAGCGTAGAGGTATTCGATCCGCGCATTAATAATGCTTA TTTTGAGATAAGCAACGGCGAGCAGACAGTCAGTGGTCATGCAGGTTTCCTGCGTCCATTTAACTGGGGCGATCTGTATA TCACTGTGACGGACTTTCGTGTGCCTTATCAACAAGAGGCAAAAGGCGTGCAAGTTAAGATGTTAGCGGTACATAACCCA CTGATTAACTATTTCTTTATCTGTTATTGCTTATTGCTGGTGAGTTTACTGTTACAAGGGCTGGTGTTTTGGCGTCGCTC AATCAAAAAAGGGGGCCGCAAATGCTAG
Upstream 100 bases:
>100_bases ACTTACCAAAAGCTTGGTTTGCTAATGGCAAAGCGTTGGCTTTAGGCAAGGCTGCAGTGCTTGGCTTTATTTGCGTATTG ATGTTGGGGTATCGCCTGTC
Downstream 100 bases:
>100_bases CTCGAGTTTATATCAGTTTATTAGCAGCTTTTAGTGTGTTGCCACTAACGGCCAGTGCGACTTCGGTTGCAAGTGACTCT AATCGCCAGTTAGCAGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKMNWLFSMRLAFVLLLLLSVWFALGVAMSEQDAYRQVLRSLNDLPMSQWMQSLANAPIVASWLVGLFGLMFLLGLNTAL CSWRDLLPTWRHKRWRSPRIMMLPIHILTLLVFIFHGVDLVFIHGHDSVVLHQGERINSGRYQIELVKVDYRNDVSQIIE DEEGFSPAGRITRRSVEVFDPRINNAYFEISNGEQTVSGHAGFLRPFNWGDLYITVTDFRVPYQQEAKGVQVKMLAVHNP LINYFFICYCLLLVSLLLQGLVFWRRSIKKGGRKC
Sequences:
>Translated_275_residues MKMNWLFSMRLAFVLLLLLSVWFALGVAMSEQDAYRQVLRSLNDLPMSQWMQSLANAPIVASWLVGLFGLMFLLGLNTAL CSWRDLLPTWRHKRWRSPRIMMLPIHILTLLVFIFHGVDLVFIHGHDSVVLHQGERINSGRYQIELVKVDYRNDVSQIIE DEEGFSPAGRITRRSVEVFDPRINNAYFEISNGEQTVSGHAGFLRPFNWGDLYITVTDFRVPYQQEAKGVQVKMLAVHNP LINYFFICYCLLLVSLLLQGLVFWRRSIKKGGRKC >Mature_275_residues MKMNWLFSMRLAFVLLLLLSVWFALGVAMSEQDAYRQVLRSLNDLPMSQWMQSLANAPIVASWLVGLFGLMFLLGLNTAL CSWRDLLPTWRHKRWRSPRIMMLPIHILTLLVFIFHGVDLVFIHGHDSVVLHQGERINSGRYQIELVKVDYRNDVSQIIE DEEGFSPAGRITRRSVEVFDPRINNAYFEISNGEQTVSGHAGFLRPFNWGDLYITVTDFRVPYQQEAKGVQVKMLAVHNP LINYFFICYCLLLVSLLLQGLVFWRRSIKKGGRKC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31850; Mature: 31850
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMNWLFSMRLAFVLLLLLSVWFALGVAMSEQDAYRQVLRSLNDLPMSQWMQSLANAPIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHH ASWLVGLFGLMFLLGLNTALCSWRDLLPTWRHKRWRSPRIMMLPIHILTLLVFIFHGVDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCEE VFIHGHDSVVLHQGERINSGRYQIELVKVDYRNDVSQIIEDEEGFSPAGRITRRSVEVFD EEEECCCEEEEECCCCCCCCCEEEEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHC PRINNAYFEISNGEQTVSGHAGFLRPFNWGDLYITVTDFRVPYQQEAKGVQVKMLAVHNP CCCCCEEEEECCCCEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCEEEEEEHHHH LINYFFICYCLLLVSLLLQGLVFWRRSIKKGGRKC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKMNWLFSMRLAFVLLLLLSVWFALGVAMSEQDAYRQVLRSLNDLPMSQWMQSLANAPIV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHH ASWLVGLFGLMFLLGLNTALCSWRDLLPTWRHKRWRSPRIMMLPIHILTLLVFIFHGVDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCEE VFIHGHDSVVLHQGERINSGRYQIELVKVDYRNDVSQIIEDEEGFSPAGRITRRSVEVFD EEEECCCEEEEECCCCCCCCCEEEEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHC PRINNAYFEISNGEQTVSGHAGFLRPFNWGDLYITVTDFRVPYQQEAKGVQVKMLAVHNP CCCCCEEEEECCCCEEECCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCEEEEEEHHHH LINYFFICYCLLLVSLLLQGLVFWRRSIKKGGRKC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA