| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963339
Identifier: 157963339
GI number: 157963339
Start: 4308023
End: 4308805
Strand: Reverse
Name: 157963339
Synonym: Spea_3525
Alternate gene names: NA
Gene position: 4308805-4308023 (Counterclockwise)
Preceding gene: 157963340
Following gene: 157963338
Centisome position: 83.27
GC content: 46.23
Gene sequence:
>783_bases ATGCTAGCTCGAGTTTATATCAGTTTATTAGCAGCTTTTAGTGTGTTGCCACTAACGGCCAGTGCGACTTCGGTTGCAAG TGACTCTAATCGCCAGTTAGCAGAGCGCTGGCTAGAACAAATACAACAACCTGTAATACAAGCAGTGCAGCTTGGCGAAG AGGCGGCTGCATGGCAACAGCAAAAAGCACAGTCTTTATCGCAGCAACAACAAGACTTAGGTGAGCTTTACTGGACTGAG TATCAGCTGCAAAAACAGCAAAGGTATTTAGCGTCCTTGCAAGCTGAGGTTGCGCAGTTGCAGCAAGACATTGCCACGAT AACTGCATTAAAGCAGGAGCTCGAGCCACAGCTTGAGATCTGGTATGCCATGTTAGAGCGTCAAGTGAGCAGCGATCTTC CGTTTGACTTTGATGAGCGTAAACGTCGCTTAGCATTTTTACGTACCGCAATGGATAGTAATGCTCTGCCATTAGCCGAG CGTTTCAGGCGCTTACTCGATGTGATGACCATAGAGGTTGCTTATGGTTATGGACTGCAGTTAACTCAAGAGGTTATCGC AGTCGATGAGCAGCCAGTGCAGGTTAATTTATTGCGACTTGGACGTTTATCTTGGTTTTATATTACGCCTGATGAGCAAC ATTTAGGTTGGTTTGATGGGCAGTCTCGCCAGTGGCGGCCATTACCTGTCGATCAACAAGGTGACATTAAATTAGCCATG GCTATCACCGCCAATAAACAGGTAGCGAAGATTGTGAAGCTTCCATTAGGAGGTTCTAAATAA
Upstream 100 bases:
>100_bases TGATTAACTATTTCTTTATCTGTTATTGCTTATTGCTGGTGAGTTTACTGTTACAAGGGCTGGTGTTTTGGCGTCGCTCA ATCAAAAAAGGGGGCCGCAA
Downstream 100 bases:
>100_bases TGAGGGCTGTGATTGCTATTTTATTCTTTAGTGCTTCTATTCAAGTCTTTGCCCAAGGCCAAGCTGTTGCAGACACTCAA GTGAGCAAAGCTGCTGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel; Chromosome Segregation ATPase
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MLARVYISLLAAFSVLPLTASATSVASDSNRQLAERWLEQIQQPVIQAVQLGEEAAAWQQQKAQSLSQQQQDLGELYWTE YQLQKQQRYLASLQAEVAQLQQDIATITALKQELEPQLEIWYAMLERQVSSDLPFDFDERKRRLAFLRTAMDSNALPLAE RFRRLLDVMTIEVAYGYGLQLTQEVIAVDEQPVQVNLLRLGRLSWFYITPDEQHLGWFDGQSRQWRPLPVDQQGDIKLAM AITANKQVAKIVKLPLGGSK
Sequences:
>Translated_260_residues MLARVYISLLAAFSVLPLTASATSVASDSNRQLAERWLEQIQQPVIQAVQLGEEAAAWQQQKAQSLSQQQQDLGELYWTE YQLQKQQRYLASLQAEVAQLQQDIATITALKQELEPQLEIWYAMLERQVSSDLPFDFDERKRRLAFLRTAMDSNALPLAE RFRRLLDVMTIEVAYGYGLQLTQEVIAVDEQPVQVNLLRLGRLSWFYITPDEQHLGWFDGQSRQWRPLPVDQQGDIKLAM AITANKQVAKIVKLPLGGSK >Mature_260_residues MLARVYISLLAAFSVLPLTASATSVASDSNRQLAERWLEQIQQPVIQAVQLGEEAAAWQQQKAQSLSQQQQDLGELYWTE YQLQKQQRYLASLQAEVAQLQQDIATITALKQELEPQLEIWYAMLERQVSSDLPFDFDERKRRLAFLRTAMDSNALPLAE RFRRLLDVMTIEVAYGYGLQLTQEVIAVDEQPVQVNLLRLGRLSWFYITPDEQHLGWFDGQSRQWRPLPVDQQGDIKLAM AITANKQVAKIVKLPLGGSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29715; Mature: 29715
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARVYISLLAAFSVLPLTASATSVASDSNRQLAERWLEQIQQPVIQAVQLGEEAAAWQQ CHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH QKAQSLSQQQQDLGELYWTEYQLQKQQRYLASLQAEVAQLQQDIATITALKQELEPQLEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH WYAMLERQVSSDLPFDFDERKRRLAFLRTAMDSNALPLAERFRRLLDVMTIEVAYGYGLQ HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHH LTQEVIAVDEQPVQVNLLRLGRLSWFYITPDEQHLGWFDGQSRQWRPLPVDQQGDIKLAM HHHHHHHCCCCCCEEHHEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE AITANKQVAKIVKLPLGGSK EEECCHHHHHHHHCCCCCCC >Mature Secondary Structure MLARVYISLLAAFSVLPLTASATSVASDSNRQLAERWLEQIQQPVIQAVQLGEEAAAWQQ CHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH QKAQSLSQQQQDLGELYWTEYQLQKQQRYLASLQAEVAQLQQDIATITALKQELEPQLEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH WYAMLERQVSSDLPFDFDERKRRLAFLRTAMDSNALPLAERFRRLLDVMTIEVAYGYGLQ HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHH LTQEVIAVDEQPVQVNLLRLGRLSWFYITPDEQHLGWFDGQSRQWRPLPVDQQGDIKLAM HHHHHHHCCCCCCEEHHEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE AITANKQVAKIVKLPLGGSK EEECCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA