| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963337
Identifier: 157963337
GI number: 157963337
Start: 4306109
End: 4306627
Strand: Reverse
Name: 157963337
Synonym: Spea_3523
Alternate gene names: NA
Gene position: 4306627-4306109 (Counterclockwise)
Preceding gene: 157963338
Following gene: 157963336
Centisome position: 83.23
GC content: 45.47
Gene sequence:
>519_bases ATGGCTCAAAGTAGTTTGATAGGGTCATTAGAGCAATTTTTTCATGCCGTTTTAGGCTTTATTGAGCTAGGTGGCATAGT GATGTGGCCGCTATTTATCTGCTGTTTATGGATGTTATGGTTAGTCAGTCGTGCCTTATTTAAAGAGACTAGCTTAGAAG CCAAGCAAAGTGGGCTAACAACAGAGCGTGACTGGCTTAATCAACGTTTGCGCTCGTTAGCACTAAGACAGGCACAGGCT CAGCAGTATGGCGATCTTCAAGGGGTTAAGTTACTTGCTATGGTGGCACCGTTATTAGGATTACTTGGCACTGTGAGCGG TATGATCGCCATGTTTGATGCGGGGGGCAATTATGGGTTTCACGATCCTGCGGTGATCTCTGCCGGGATCTCTATGGCGA TGGTGACCACACAAACCGGTTTGTTTGTCGGTTTAACTGGCGCCATATTAGCTTTTTTTTGGCAGCGAAAATTAAACCGT GTCGATACTAATTTATTAGCTGGAGGCGCTAATGCTTAG
Upstream 100 bases:
>100_bases CTGCATTACCCGTTAAAGCGCCGCGCTCAAGCTTTAAGTTTGAATATGGAGCAGCAATCAGCCTTGTTACTAGCGCTCAA CCTTGAGCAAGGGGAATGCC
Downstream 100 bases:
>100_bases CGATCGATTTAGACAAGATAAAGATCCTGAAATCAACATGACGCCTATGCTTGATGTGGTGTTTATCTTGCTGATCTTCT TTATTGTGTCGACCAACTTT
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MAQSSLIGSLEQFFHAVLGFIELGGIVMWPLFICCLWMLWLVSRALFKETSLEAKQSGLTTERDWLNQRLRSLALRQAQA QQYGDLQGVKLLAMVAPLLGLLGTVSGMIAMFDAGGNYGFHDPAVISAGISMAMVTTQTGLFVGLTGAILAFFWQRKLNR VDTNLLAGGANA
Sequences:
>Translated_172_residues MAQSSLIGSLEQFFHAVLGFIELGGIVMWPLFICCLWMLWLVSRALFKETSLEAKQSGLTTERDWLNQRLRSLALRQAQA QQYGDLQGVKLLAMVAPLLGLLGTVSGMIAMFDAGGNYGFHDPAVISAGISMAMVTTQTGLFVGLTGAILAFFWQRKLNR VDTNLLAGGANA >Mature_171_residues AQSSLIGSLEQFFHAVLGFIELGGIVMWPLFICCLWMLWLVSRALFKETSLEAKQSGLTTERDWLNQRLRSLALRQAQAQ QYGDLQGVKLLAMVAPLLGLLGTVSGMIAMFDAGGNYGFHDPAVISAGISMAMVTTQTGLFVGLTGAILAFFWQRKLNRV DTNLLAGGANA
Specific function: Unknown
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18656; Mature: 18525
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSSLIGSLEQFFHAVLGFIELGGIVMWPLFICCLWMLWLVSRALFKETSLEAKQSGLT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TERDWLNQRLRSLALRQAQAQQYGDLQGVKLLAMVAPLLGLLGTVSGMIAMFDAGGNYGF CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC HDPAVISAGISMAMVTTQTGLFVGLTGAILAFFWQRKLNRVDTNLLAGGANA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AQSSLIGSLEQFFHAVLGFIELGGIVMWPLFICCLWMLWLVSRALFKETSLEAKQSGLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TERDWLNQRLRSLALRQAQAQQYGDLQGVKLLAMVAPLLGLLGTVSGMIAMFDAGGNYGF CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC HDPAVISAGISMAMVTTQTGLFVGLTGAILAFFWQRKLNRVDTNLLAGGANA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA