| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is tolQ [C]
Identifier: 157963338
GI number: 157963338
Start: 4306614
End: 4308023
Strand: Reverse
Name: tolQ [C]
Synonym: Spea_3524
Alternate gene names: 157963338
Gene position: 4308023-4306614 (Counterclockwise)
Preceding gene: 157963339
Following gene: 157963337
Centisome position: 83.25
GC content: 47.02
Gene sequence:
>1410_bases ATGAGGGCTGTGATTGCTATTTTATTCTTTAGTGCTTCTATTCAAGTCTTTGCCCAAGGCCAAGCTGTTGCAGACACTCA AGTGAGCAAAGCTGCTGGTAATTATCTGCAGCAAAAGGCACAAATCGATAACCGAGTGGCTGATATCCGTCAGCAAAATA GCGCTTGGGAGCATCAATTAAAACAAGAGATCGATGAGGTTAAATCTAACCAACAAGAGTTAAGCGCAAGATTAGCCAGT AAACGCGCACAGCTCGCAGCATTAAATGAGCAACTAGTCGCGCTTAATCAGCAAAAGCAGCAGTTAACTGGCAGTTATCA ACTAGCTGTTGATGATATGCAGCTGGTTCAAGGGGCTTATCAAAAAGCGCTGAGTAGTTTAACGCAGCAATGGCAGCAAA GTTCTACAAGCTTAATTGAAGTGCAGCGAGAGCAAAGTTTAGCTGTCGCTAAGGCGAGCTCAAGCTTTCCAAGCCTGTCG CAACTTAATGAGCTTATCGGTTACGCCGTTGACGATATGCAGATGACAGCACAAGTTGCCCGTACTTCTGCACCAATAAG CCAAGCCGATGGCAGTGTTAGCACAAAAGAGCTACTCGTATTTGGTGGTTTAATGGCCGTAACCGATACGGATTTACCGA GTTTCATTGCCTTTACTGACAAACTGCCAACCGCAATTACGCCTGTTGATACCGGTGTTAGTCTGCAGCTAAAAGCGTGG ATAGATGGGGAAACTCAACTATTGGCAATGGATTTAAGTCAAGGCCGCATGTTGCCAAGCTTGGCGCAAAAGCAAAGCGT TGGCCAATGGGTAAAAGATGGTGGCGAAGTGTTGTGGCCAATTCTTATTTTAGCAGCGCTTGGCTTACTGATCGCCCTTT GGCGCGCGGTGATCTTGCTGTATTGGCGTCCATTAGCCCAGCTTCAAAAAGATGATAGCGCTAAAGCGGATCTGCTAAAG ATTAAGCAGCAACTACAGAGTGTGTCTCGAGTGCCAGCAGCGAAAGTGTTAGCTAATGCCATTGTTGAAGGTAGCTGTGT TGACGCAATGGATCAGCGGCTCAAGCAGTTGATGCTGAAACAGATGGCGCAATTTGAGCGAGGTCTTGGCTTTATTGCGC TGCTTGCTGCCATGGCTCCAATGCTAGGTTTACTAGGAACTGTGTCGGGGATGATTGAAACATTTCAGTCTTTAACCGAG TTCGGCAATAGCGACCCTAAATTGCTATCTCAAGGGATCAGTAAGGCGCTAATCACCACTCAGGCTGGCTTGCTGGTGGC ACTGCCTCTGTTATTGCTGCATTACCCGTTAAAGCGCCGCGCTCAAGCTTTAAGTTTGAATATGGAGCAGCAATCAGCCT TGTTACTAGCGCTCAACCTTGAGCAAGGGGAATGCCATGGCTCAAAGTAG
Upstream 100 bases:
>100_bases TACCTGTCGATCAACAAGGTGACATTAAATTAGCCATGGCTATCACCGCCAATAAACAGGTAGCGAAGATTGTGAAGCTT CCATTAGGAGGTTCTAAATA
Downstream 100 bases:
>100_bases TTTGATAGGGTCATTAGAGCAATTTTTTCATGCCGTTTTAGGCTTTATTGAGCTAGGTGGCATAGTGATGTGGCCGCTAT TTATCTGCTGTTTATGGATG
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MRAVIAILFFSASIQVFAQGQAVADTQVSKAAGNYLQQKAQIDNRVADIRQQNSAWEHQLKQEIDEVKSNQQELSARLAS KRAQLAALNEQLVALNQQKQQLTGSYQLAVDDMQLVQGAYQKALSSLTQQWQQSSTSLIEVQREQSLAVAKASSSFPSLS QLNELIGYAVDDMQMTAQVARTSAPISQADGSVSTKELLVFGGLMAVTDTDLPSFIAFTDKLPTAITPVDTGVSLQLKAW IDGETQLLAMDLSQGRMLPSLAQKQSVGQWVKDGGEVLWPILILAALGLLIALWRAVILLYWRPLAQLQKDDSAKADLLK IKQQLQSVSRVPAAKVLANAIVEGSCVDAMDQRLKQLMLKQMAQFERGLGFIALLAAMAPMLGLLGTVSGMIETFQSLTE FGNSDPKLLSQGISKALITTQAGLLVALPLLLLHYPLKRRAQALSLNMEQQSALLLALNLEQGECHGSK
Sequences:
>Translated_469_residues MRAVIAILFFSASIQVFAQGQAVADTQVSKAAGNYLQQKAQIDNRVADIRQQNSAWEHQLKQEIDEVKSNQQELSARLAS KRAQLAALNEQLVALNQQKQQLTGSYQLAVDDMQLVQGAYQKALSSLTQQWQQSSTSLIEVQREQSLAVAKASSSFPSLS QLNELIGYAVDDMQMTAQVARTSAPISQADGSVSTKELLVFGGLMAVTDTDLPSFIAFTDKLPTAITPVDTGVSLQLKAW IDGETQLLAMDLSQGRMLPSLAQKQSVGQWVKDGGEVLWPILILAALGLLIALWRAVILLYWRPLAQLQKDDSAKADLLK IKQQLQSVSRVPAAKVLANAIVEGSCVDAMDQRLKQLMLKQMAQFERGLGFIALLAAMAPMLGLLGTVSGMIETFQSLTE FGNSDPKLLSQGISKALITTQAGLLVALPLLLLHYPLKRRAQALSLNMEQQSALLLALNLEQGECHGSK >Mature_469_residues MRAVIAILFFSASIQVFAQGQAVADTQVSKAAGNYLQQKAQIDNRVADIRQQNSAWEHQLKQEIDEVKSNQQELSARLAS KRAQLAALNEQLVALNQQKQQLTGSYQLAVDDMQLVQGAYQKALSSLTQQWQQSSTSLIEVQREQSLAVAKASSSFPSLS QLNELIGYAVDDMQMTAQVARTSAPISQADGSVSTKELLVFGGLMAVTDTDLPSFIAFTDKLPTAITPVDTGVSLQLKAW IDGETQLLAMDLSQGRMLPSLAQKQSVGQWVKDGGEVLWPILILAALGLLIALWRAVILLYWRPLAQLQKDDSAKADLLK IKQQLQSVSRVPAAKVLANAIVEGSCVDAMDQRLKQLMLKQMAQFERGLGFIALLAAMAPMLGLLGTVSGMIETFQSLTE FGNSDPKLLSQGISKALITTQAGLLVALPLLLLHYPLKRRAQALSLNMEQQSALLLALNLEQGECHGSK
Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3, And K). [C]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 50963; Mature: 50963
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVIAILFFSASIQVFAQGQAVADTQVSKAAGNYLQQKAQIDNRVADIRQQNSAWEHQL CHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH KQEIDEVKSNQQELSARLASKRAQLAALNEQLVALNQQKQQLTGSYQLAVDDMQLVQGAY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH QKALSSLTQQWQQSSTSLIEVQREQSLAVAKASSSFPSLSQLNELIGYAVDDMQMTAQVA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RTSAPISQADGSVSTKELLVFGGLMAVTDTDLPSFIAFTDKLPTAITPVDTGVSLQLKAW HHCCCCHHCCCCCCHHHHHHHCCHHHEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEE IDGETQLLAMDLSQGRMLPSLAQKQSVGQWVKDGGEVLWPILILAALGLLIALWRAVILL ECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YWRPLAQLQKDDSAKADLLKIKQQLQSVSRVPAAKVLANAIVEGSCVDAMDQRLKQLMLK HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH QMAQFERGLGFIALLAAMAPMLGLLGTVSGMIETFQSLTEFGNSDPKLLSQGISKALITT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QAGLLVALPLLLLHYPLKRRAQALSLNMEQQSALLLALNLEQGECHGSK HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCEEEEEEECCCCCCCCCC >Mature Secondary Structure MRAVIAILFFSASIQVFAQGQAVADTQVSKAAGNYLQQKAQIDNRVADIRQQNSAWEHQL CHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH KQEIDEVKSNQQELSARLASKRAQLAALNEQLVALNQQKQQLTGSYQLAVDDMQLVQGAY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH QKALSSLTQQWQQSSTSLIEVQREQSLAVAKASSSFPSLSQLNELIGYAVDDMQMTAQVA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RTSAPISQADGSVSTKELLVFGGLMAVTDTDLPSFIAFTDKLPTAITPVDTGVSLQLKAW HHCCCCHHCCCCCCHHHHHHHCCHHHEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEE IDGETQLLAMDLSQGRMLPSLAQKQSVGQWVKDGGEVLWPILILAALGLLIALWRAVILL ECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YWRPLAQLQKDDSAKADLLKIKQQLQSVSRVPAAKVLANAIVEGSCVDAMDQRLKQLMLK HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH QMAQFERGLGFIALLAAMAPMLGLLGTVSGMIETFQSLTEFGNSDPKLLSQGISKALITT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH QAGLLVALPLLLLHYPLKRRAQALSLNMEQQSALLLALNLEQGECHGSK HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]