| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is dbpA [H]
Identifier: 157963312
GI number: 157963312
Start: 4276820
End: 4278229
Strand: Reverse
Name: dbpA [H]
Synonym: Spea_3498
Alternate gene names: 157963312
Gene position: 4278229-4276820 (Counterclockwise)
Preceding gene: 157963313
Following gene: 157963310
Centisome position: 82.68
GC content: 46.95
Gene sequence:
>1410_bases TTGACTCAAACAGTCCCGAATACCGAAGGCCAAGCGCCATTCTCAAGCCTTAAGCTGAAGACTGAGCTGCTAGATAACCT GAAAACAATGGGTTATGACTCTATGACCCCGATTCAAGCGCAAAGCTTACCTGCAATCCTTAATGGCGAAGATGTTATTG GCCAAGGTAAGACTGGCTCAGGTAAAACTGCTGCGTTCGGTTTGGGCTTATTGCACAAGTTAGACGTTAAACGTTTTCGT ATTCAGTGTTTGGTTTTATGCCCAACACGCGAACTTGCCGACCAAGTGGCAAAAGAGATCCGTACACTAGCGCGCGGTAT TCACAACATTAAAGTGTTGACCCTTTGTGGCGGTGTGCCAATGGGGCCGCAAATTGGCTCACTAGAGCATGGCGCACATA TCATAGTTGGTACGCCGGGCCGTATTATCGATCACTTAGATCGCGGTCGTTTAGATCTAGAAAATGTGCATACCTTAGTA CTTGATGAAGCCGACCGTATGCTAGAGATGGGTTTTCAAGTAGAACTCGAAGGTATCATGGATCGCATGCCAATAGAGCG CCAGACGCTGCTATTTAGTGCTACTTTCCCTGAGCAGATCCAGTCGATTGCCGATAAGATCATGTTCAAGCCTGTGCTGG TTAAAGTGGCTTCGACTCATGCTACAAGTACCATTGAACAACACTTCTATGAAGTGGGTAATAATAACGATCGCATGCGT GCGCTTAAGTTATTGCTGCTGCAATACCGCCCTGAGAGCGCAGTGGTATTTTGTAATACCAAGCGTGAAACCAAAGACGT TGCGGCGCAGCTGAAGAATGACGGTTTTAGCGTTGTAGCGCTACATGGCGATCTTGAGCAGCGCGATCGCGATCAAACAC TACTTCAGTTTGCCAATAAGAGTGTGTCTATCATGGTGGCGACAGACGTTGCTGCTCGTGGTCTTGATATCGACGCATTA GACGCGGTAATTAACTATCACGTAGCTTATGACACCGAAGTTCACATTCACCGTATTGGCCGTACTGGTCGTGCGGGTAG CAAAGGTTCGGCGCACACTTTCTACAATGACGAAGACGGCTACAAGATTGCACTACTCGAAGATTACTTAGAGCGTGATA TCGTTAATGAAGCCCTACCTTCAGAGCACTTGTTAGATACCTTCCCGGTACAACCTGTGATGATCACCTTGCAAATTGAT GGTGGTAAAAAGCAGAAGTTACGTCCTGGTGATATCTTAGGTGCGCTAACGGGCGAGAACGGTATTGAAGGTAGCGAAGT CGGTAAGATTAAAATCACCGATATGCGCGCTTATGTGGCGGTTAACCGCAAAGTGGCTAAAAAGGCACTGCAAAAAATTA CTAACGGCAAGCTAAAAGGCCGTTCATATCGTGCATGGGAAATGCGTTAA
Upstream 100 bases:
>100_bases GTCACCATGATTTTATCACTGCCAAGCGCGATTTGATGAGCCTTAGTAAGGTATCGAGTTCAAGATCCCTAATGAGCAGT GAATACTTAGGAAAGATACT
Downstream 100 bases:
>100_bases GCGCATTTTCTTTATTATTGGAGTGAGTCTACCCATTTGATTCACTCTGACAATGACAAAGTTAAGCCATAAAAAAAGCA GCGTATAAACGCTGCTTTTT
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MTQTVPNTEGQAPFSSLKLKTELLDNLKTMGYDSMTPIQAQSLPAILNGEDVIGQGKTGSGKTAAFGLGLLHKLDVKRFR IQCLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGVPMGPQIGSLEHGAHIIVGTPGRIIDHLDRGRLDLENVHTLV LDEADRMLEMGFQVELEGIMDRMPIERQTLLFSATFPEQIQSIADKIMFKPVLVKVASTHATSTIEQHFYEVGNNNDRMR ALKLLLLQYRPESAVVFCNTKRETKDVAAQLKNDGFSVVALHGDLEQRDRDQTLLQFANKSVSIMVATDVAARGLDIDAL DAVINYHVAYDTEVHIHRIGRTGRAGSKGSAHTFYNDEDGYKIALLEDYLERDIVNEALPSEHLLDTFPVQPVMITLQID GGKKQKLRPGDILGALTGENGIEGSEVGKIKITDMRAYVAVNRKVAKKALQKITNGKLKGRSYRAWEMR
Sequences:
>Translated_469_residues MTQTVPNTEGQAPFSSLKLKTELLDNLKTMGYDSMTPIQAQSLPAILNGEDVIGQGKTGSGKTAAFGLGLLHKLDVKRFR IQCLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGVPMGPQIGSLEHGAHIIVGTPGRIIDHLDRGRLDLENVHTLV LDEADRMLEMGFQVELEGIMDRMPIERQTLLFSATFPEQIQSIADKIMFKPVLVKVASTHATSTIEQHFYEVGNNNDRMR ALKLLLLQYRPESAVVFCNTKRETKDVAAQLKNDGFSVVALHGDLEQRDRDQTLLQFANKSVSIMVATDVAARGLDIDAL DAVINYHVAYDTEVHIHRIGRTGRAGSKGSAHTFYNDEDGYKIALLEDYLERDIVNEALPSEHLLDTFPVQPVMITLQID GGKKQKLRPGDILGALTGENGIEGSEVGKIKITDMRAYVAVNRKVAKKALQKITNGKLKGRSYRAWEMR >Mature_468_residues TQTVPNTEGQAPFSSLKLKTELLDNLKTMGYDSMTPIQAQSLPAILNGEDVIGQGKTGSGKTAAFGLGLLHKLDVKRFRI QCLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGVPMGPQIGSLEHGAHIIVGTPGRIIDHLDRGRLDLENVHTLVL DEADRMLEMGFQVELEGIMDRMPIERQTLLFSATFPEQIQSIADKIMFKPVLVKVASTHATSTIEQHFYEVGNNNDRMRA LKLLLLQYRPESAVVFCNTKRETKDVAAQLKNDGFSVVALHGDLEQRDRDQTLLQFANKSVSIMVATDVAARGLDIDALD AVINYHVAYDTEVHIHRIGRTGRAGSKGSAHTFYNDEDGYKIALLEDYLERDIVNEALPSEHLLDTFPVQPVMITLQIDG GKKQKLRPGDILGALTGENGIEGSEVGKIKITDMRAYVAVNRKVAKKALQKITNGKLKGRSYRAWEMR
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=404, Percent_Identity=37.1287128712871, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI45446743, Length=404, Percent_Identity=37.1287128712871, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI7661920, Length=363, Percent_Identity=34.9862258953168, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI41327773, Length=349, Percent_Identity=38.6819484240688, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI4758138, Length=352, Percent_Identity=35.2272727272727, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI20149629, Length=359, Percent_Identity=36.7688022284123, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI148613856, Length=352, Percent_Identity=35.2272727272727, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI38201710, Length=352, Percent_Identity=35.2272727272727, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI50659095, Length=385, Percent_Identity=37.1428571428571, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI31542656, Length=373, Percent_Identity=36.1930294906166, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI87196351, Length=382, Percent_Identity=36.6492146596859, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI301171467, Length=382, Percent_Identity=36.6492146596859, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI301171475, Length=382, Percent_Identity=36.6492146596859, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI262118318, Length=366, Percent_Identity=36.8852459016393, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=36.7567567567568, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=36.7567567567568, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI262231852, Length=366, Percent_Identity=36.8852459016393, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI216548263, Length=366, Percent_Identity=36.8852459016393, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI13518015, Length=366, Percent_Identity=36.8852459016393, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI164664518, Length=380, Percent_Identity=32.1052631578947, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=37.3595505617978, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI13129006, Length=374, Percent_Identity=37.1657754010695, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI222352149, Length=376, Percent_Identity=35.1063829787234, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI41327771, Length=399, Percent_Identity=33.8345864661654, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI224593278, Length=353, Percent_Identity=35.6940509915014, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI4758112, Length=373, Percent_Identity=33.5120643431635, Blast_Score=198, Evalue=9e-51, Organism=Homo sapiens, GI18375623, Length=373, Percent_Identity=33.5120643431635, Blast_Score=198, Evalue=9e-51, Organism=Homo sapiens, GI21040371, Length=379, Percent_Identity=33.245382585752, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI164419743, Length=345, Percent_Identity=35.0724637681159, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI51094101, Length=345, Percent_Identity=35.0724637681159, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI188035877, Length=348, Percent_Identity=32.7586206896552, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI83700235, Length=349, Percent_Identity=35.8166189111748, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI41327776, Length=359, Percent_Identity=33.1476323119777, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI4503529, Length=370, Percent_Identity=33.5135135135135, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38327634, Length=342, Percent_Identity=36.5497076023392, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI8922886, Length=353, Percent_Identity=32.2946175637394, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI6005743, Length=353, Percent_Identity=32.2946175637394, Blast_Score=181, Evalue=9e-46, Organism=Homo sapiens, GI256223453, Length=352, Percent_Identity=30.1136363636364, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI41327779, Length=398, Percent_Identity=29.3969849246231, Blast_Score=179, Evalue=7e-45, Organism=Homo sapiens, GI13514831, Length=353, Percent_Identity=33.4277620396601, Blast_Score=178, Evalue=7e-45, Organism=Homo sapiens, GI164419732, Length=361, Percent_Identity=30.7479224376731, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI55749865, Length=370, Percent_Identity=30, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI38569503, Length=356, Percent_Identity=32.3033707865169, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI38569505, Length=356, Percent_Identity=32.3033707865169, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI62241022, Length=337, Percent_Identity=32.0474777448071, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI62241024, Length=350, Percent_Identity=30.5714285714286, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=27.7777777777778, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI9966805, Length=350, Percent_Identity=32.5714285714286, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI4826686, Length=329, Percent_Identity=30.3951367781155, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI17505907, Length=216, Percent_Identity=34.2592592592593, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI256773275, Length=371, Percent_Identity=27.7628032345013, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI20336298, Length=216, Percent_Identity=34.2592592592593, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI154759257, Length=407, Percent_Identity=25.5528255528256, Blast_Score=110, Evalue=3e-24, Organism=Escherichia coli, GI1787605, Length=452, Percent_Identity=51.5486725663717, Blast_Score=465, Evalue=1e-132, Organism=Escherichia coli, GI87082221, Length=378, Percent_Identity=42.3280423280423, Blast_Score=288, Evalue=6e-79, Organism=Escherichia coli, GI1787016, Length=387, Percent_Identity=36.4341085271318, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI1790214, Length=394, Percent_Identity=35.2791878172589, Blast_Score=224, Evalue=6e-60, Organism=Escherichia coli, GI1788930, Length=354, Percent_Identity=35.8757062146893, Blast_Score=192, Evalue=3e-50, Organism=Escherichia coli, GI48994977, Length=361, Percent_Identity=23.2686980609418, Blast_Score=65, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71995724, Length=363, Percent_Identity=37.1900826446281, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17507121, Length=363, Percent_Identity=37.1900826446281, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17552642, Length=354, Percent_Identity=38.9830508474576, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI71987143, Length=368, Percent_Identity=34.5108695652174, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI86570094, Length=361, Percent_Identity=39.612188365651, Blast_Score=241, Evalue=6e-64, Organism=Caenorhabditis elegans, GI17555296, Length=351, Percent_Identity=39.8860398860399, Blast_Score=241, Evalue=8e-64, Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=39.945652173913, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI115533224, Length=340, Percent_Identity=37.6470588235294, Blast_Score=227, Evalue=9e-60, Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=37.3297002724796, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=37.3297002724796, Blast_Score=220, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=37.3297002724796, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507945, Length=358, Percent_Identity=37.4301675977654, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17552114, Length=379, Percent_Identity=31.3984168865435, Blast_Score=211, Evalue=9e-55, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=36.1930294906166, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI115532546, Length=356, Percent_Identity=35.3932584269663, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI115532548, Length=364, Percent_Identity=35.1648351648352, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI32565321, Length=373, Percent_Identity=34.0482573726542, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71999646, Length=335, Percent_Identity=36.1194029850746, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI71999644, Length=335, Percent_Identity=36.1194029850746, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17537549, Length=382, Percent_Identity=33.2460732984293, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=35.2941176470588, Blast_Score=198, Evalue=6e-51, Organism=Caenorhabditis elegans, GI17510559, Length=401, Percent_Identity=32.1695760598504, Blast_Score=194, Evalue=6e-50, Organism=Caenorhabditis elegans, GI17507881, Length=378, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17505370, Length=347, Percent_Identity=34.5821325648415, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71982858, Length=354, Percent_Identity=30.5084745762712, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17509811, Length=348, Percent_Identity=32.7586206896552, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI193206561, Length=358, Percent_Identity=30.7262569832402, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17536099, Length=387, Percent_Identity=31.266149870801, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17536101, Length=387, Percent_Identity=31.266149870801, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17536103, Length=388, Percent_Identity=31.1855670103093, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17553716, Length=369, Percent_Identity=28.9972899728997, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI193208216, Length=393, Percent_Identity=29.0076335877863, Blast_Score=157, Evalue=8e-39, Organism=Caenorhabditis elegans, GI71990816, Length=385, Percent_Identity=34.025974025974, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17507641, Length=381, Percent_Identity=30.7086614173228, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17508543, Length=375, Percent_Identity=29.3333333333333, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17556951, Length=400, Percent_Identity=28, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI32564046, Length=369, Percent_Identity=30.3523035230352, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI25148203, Length=392, Percent_Identity=23.9795918367347, Blast_Score=118, Evalue=7e-27, Organism=Caenorhabditis elegans, GI25148291, Length=343, Percent_Identity=27.4052478134111, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71982862, Length=197, Percent_Identity=31.4720812182741, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71997889, Length=363, Percent_Identity=26.9972451790634, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI25148205, Length=318, Percent_Identity=24.2138364779874, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=37.2727272727273, Blast_Score=86, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6324217, Length=358, Percent_Identity=39.3854748603352, Blast_Score=250, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6321360, Length=337, Percent_Identity=40.6528189910979, Blast_Score=237, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6324778, Length=388, Percent_Identity=36.8556701030928, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6320224, Length=362, Percent_Identity=33.4254143646409, Blast_Score=228, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6320041, Length=380, Percent_Identity=33.1578947368421, Blast_Score=226, Evalue=7e-60, Organism=Saccharomyces cerevisiae, GI6325138, Length=366, Percent_Identity=36.8852459016393, Blast_Score=222, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6321856, Length=376, Percent_Identity=36.7021276595745, Blast_Score=220, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6323021, Length=365, Percent_Identity=37.5342465753425, Blast_Score=216, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6320449, Length=389, Percent_Identity=34.1902313624679, Blast_Score=209, Evalue=6e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=35.4054054054054, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=35.4054054054054, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6320173, Length=397, Percent_Identity=32.4937027707809, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6323947, Length=351, Percent_Identity=35.8974358974359, Blast_Score=199, Evalue=9e-52, Organism=Saccharomyces cerevisiae, GI6321963, Length=377, Percent_Identity=34.4827586206897, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6324620, Length=360, Percent_Identity=31.3888888888889, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6319714, Length=356, Percent_Identity=31.1797752808989, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6322427, Length=360, Percent_Identity=33.8888888888889, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=28.6516853932584, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6319618, Length=417, Percent_Identity=29.4964028776978, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6321111, Length=355, Percent_Identity=31.5492957746479, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=363, Percent_Identity=32.7823691460055, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=381, Percent_Identity=30.1837270341207, Blast_Score=146, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6324366, Length=431, Percent_Identity=24.8259860788863, Blast_Score=117, Evalue=5e-27, Organism=Saccharomyces cerevisiae, GI6322876, Length=422, Percent_Identity=26.303317535545, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6323306, Length=408, Percent_Identity=23.2843137254902, Blast_Score=110, Evalue=3e-25, Organism=Drosophila melanogaster, GI24662330, Length=353, Percent_Identity=40.5099150141643, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI24642151, Length=345, Percent_Identity=40.5797101449275, Blast_Score=245, Evalue=4e-65, Organism=Drosophila melanogaster, GI24584399, Length=359, Percent_Identity=39.2757660167131, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI24645031, Length=373, Percent_Identity=35.656836461126, Blast_Score=241, Evalue=6e-64, Organism=Drosophila melanogaster, GI28574962, Length=350, Percent_Identity=36.8571428571429, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI21355075, Length=347, Percent_Identity=36.8876080691643, Blast_Score=228, Evalue=8e-60, Organism=Drosophila melanogaster, GI24585582, Length=352, Percent_Identity=37.5, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=37.0967741935484, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24644487, Length=379, Percent_Identity=34.8284960422164, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI45551833, Length=379, Percent_Identity=34.8284960422164, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI24644485, Length=379, Percent_Identity=34.8284960422164, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI24644479, Length=379, Percent_Identity=34.8284960422164, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI24644483, Length=379, Percent_Identity=34.8284960422164, Blast_Score=224, Evalue=9e-59, Organism=Drosophila melanogaster, GI281361218, Length=379, Percent_Identity=34.8284960422164, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24644481, Length=379, Percent_Identity=34.8284960422164, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI18857967, Length=389, Percent_Identity=33.6760925449871, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI28575014, Length=365, Percent_Identity=35.8904109589041, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI17977678, Length=367, Percent_Identity=35.4223433242507, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24584994, Length=374, Percent_Identity=33.9572192513369, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI24582080, Length=369, Percent_Identity=33.8753387533875, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24582078, Length=369, Percent_Identity=33.8753387533875, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI17136248, Length=369, Percent_Identity=33.8753387533875, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24582075, Length=369, Percent_Identity=33.8753387533875, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24583281, Length=373, Percent_Identity=30.8310991957105, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI24583279, Length=373, Percent_Identity=30.8310991957105, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI21356161, Length=387, Percent_Identity=33.8501291989664, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI17136814, Length=398, Percent_Identity=34.9246231155779, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI281365720, Length=303, Percent_Identity=36.3036303630363, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI28571808, Length=352, Percent_Identity=35.2272727272727, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI28571809, Length=352, Percent_Identity=35.2272727272727, Blast_Score=188, Evalue=8e-48, Organism=Drosophila melanogaster, GI24581954, Length=382, Percent_Identity=31.6753926701571, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581952, Length=382, Percent_Identity=31.6753926701571, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581956, Length=382, Percent_Identity=31.6753926701571, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24666101, Length=359, Percent_Identity=32.8690807799443, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI17647335, Length=352, Percent_Identity=31.5340909090909, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24642822, Length=388, Percent_Identity=30.6701030927835, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI21355559, Length=377, Percent_Identity=30.2387267904509, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI24643725, Length=391, Percent_Identity=26.8542199488491, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI19920478, Length=363, Percent_Identity=30.3030303030303, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24668515, Length=321, Percent_Identity=29.2834890965732, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI17136666, Length=412, Percent_Identity=25.9708737864078, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI20130173, Length=344, Percent_Identity=29.3604651162791, Blast_Score=118, Evalue=8e-27, Organism=Drosophila melanogaster, GI28571338, Length=232, Percent_Identity=31.0344827586207, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI18859659, Length=232, Percent_Identity=31.0344827586207, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24640164, Length=346, Percent_Identity=22.8323699421965, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 51882; Mature: 51750
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTVPNTEGQAPFSSLKLKTELLDNLKTMGYDSMTPIQAQSLPAILNGEDVIGQGKTGS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEECCCCEECCCCCCC GKTAAFGLGLLHKLDVKRFRIQCLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGVP CCCHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC MGPQIGSLEHGAHIIVGTPGRIIDHLDRGRLDLENVHTLVLDEADRMLEMGFQVELEGIM CCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCHHHHHEEEHHHHHHHHHCCCEEEEHHHH DRMPIERQTLLFSATFPEQIQSIADKIMFKPVLVKVASTHATSTIEQHFYEVGNNNDRMR HCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ALKLLLLQYRPESAVVFCNTKRETKDVAAQLKNDGFSVVALHGDLEQRDRDQTLLQFANK HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCC SVSIMVATDVAARGLDIDALDAVINYHVAYDTEVHIHRIGRTGRAGSKGSAHTFYNDEDG CEEEEEEECHHHCCCCHHHHHHHHEEEEEECCEEEEEECCCCCCCCCCCCCCCEECCCCC YKIALLEDYLERDIVNEALPSEHLLDTFPVQPVMITLQIDGGKKQKLRPGDILGALTGEN EEEEHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCC GIEGSEVGKIKITDMRAYVAVNRKVAKKALQKITNGKLKGRSYRAWEMR CCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEECCC >Mature Secondary Structure TQTVPNTEGQAPFSSLKLKTELLDNLKTMGYDSMTPIQAQSLPAILNGEDVIGQGKTGS CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEECCCCEECCCCCCC GKTAAFGLGLLHKLDVKRFRIQCLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGVP CCCHHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC MGPQIGSLEHGAHIIVGTPGRIIDHLDRGRLDLENVHTLVLDEADRMLEMGFQVELEGIM CCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCHHHHHEEEHHHHHHHHHCCCEEEEHHHH DRMPIERQTLLFSATFPEQIQSIADKIMFKPVLVKVASTHATSTIEQHFYEVGNNNDRMR HCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ALKLLLLQYRPESAVVFCNTKRETKDVAAQLKNDGFSVVALHGDLEQRDRDQTLLQFANK HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCC SVSIMVATDVAARGLDIDALDAVINYHVAYDTEVHIHRIGRTGRAGSKGSAHTFYNDEDG CEEEEEEECHHHCCCCHHHHHHHHEEEEEECCEEEEEECCCCCCCCCCCCCCCEECCCCC YKIALLEDYLERDIVNEALPSEHLLDTFPVQPVMITLQIDGGKKQKLRPGDILGALTGEN EEEEHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCC GIEGSEVGKIKITDMRAYVAVNRKVAKKALQKITNGKLKGRSYRAWEMR CCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]