| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963313
Identifier: 157963313
GI number: 157963313
Start: 4278571
End: 4279266
Strand: Reverse
Name: 157963313
Synonym: Spea_3499
Alternate gene names: NA
Gene position: 4279266-4278571 (Counterclockwise)
Preceding gene: 157963314
Following gene: 157963312
Centisome position: 82.7
GC content: 45.11
Gene sequence:
>696_bases ATGACTGCCACACGTATATTTATTCTGACTATGACCCTACTATTAACTGGCTGTGGAGTCGTTCAGGATTATAGAAACTC ACAGATGTTTAGCTCGTTCGAAGATTTTCGTCCAGGTCCTGAAGGTGGCAGCGATTTGATTTGGGCGCAGCCGGGGATTA AGAGTCTAGAAGATCTTAATCACATCCTCGGTCAATACGACAATGTTATCGTCGATCAGGCTTGGTTGGTATTAGATGAC AAGACCCGATATGACAACTTAGACGAGCAAGATATTATTGAAGTGTCGCGGTACTTGGTGAGTAAGATTAAAGACAAAGC CAGTAAGCGCTTTAACGTCATTGATCAAGACACGCTCAACAGCGATAGCGCTAAAACCTTAAGAGTCAGTGTTGCCCTAA CCAATATTGAAACCCCTAATCCGATTTTAGCCGTTACCAGCAGCCTTCTGCCTGTAGGACTTGGGATCTCGAGTATCTCA AAGGTTGTGACGGGTGAGCATACTAATGTGGGCAGCGCAACGATAGAACTTATGATTAGCGATGCAAAAACGGGTCAACC TATCGTTGCTGTTATCGACCGAAAAGCGGGCAGTAAAGACTTTAGCACCATGATAGATTCTACTGATGATGCAAAAGATG CCGTCGATTGGTGGGTTGAGCGTTTAGGCTCAACTTTGCGTGGAGAGGCACTCTAG
Upstream 100 bases:
>100_bases CATCTGTGTACCAGGCTGTTGTTTGTGTTTGGGATCGTGTAAACTTTGTTCTTTTAGCGCTAGCAAGACTGTCGGCGTAG ACTTTAAGTGAGTAACCATA
Downstream 100 bases:
>100_bases ATTAGCTGAAAACAGCAAGCAAGATTAAAAGCTGGCTCAATTGTGCCAGCTTTTTTATGCTCTTTTTTCTGGGAATGAAA CTCTGCAGTAGTAAATCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTATRIFILTMTLLLTGCGVVQDYRNSQMFSSFEDFRPGPEGGSDLIWAQPGIKSLEDLNHILGQYDNVIVDQAWLVLDD KTRYDNLDEQDIIEVSRYLVSKIKDKASKRFNVIDQDTLNSDSAKTLRVSVALTNIETPNPILAVTSSLLPVGLGISSIS KVVTGEHTNVGSATIELMISDAKTGQPIVAVIDRKAGSKDFSTMIDSTDDAKDAVDWWVERLGSTLRGEAL
Sequences:
>Translated_231_residues MTATRIFILTMTLLLTGCGVVQDYRNSQMFSSFEDFRPGPEGGSDLIWAQPGIKSLEDLNHILGQYDNVIVDQAWLVLDD KTRYDNLDEQDIIEVSRYLVSKIKDKASKRFNVIDQDTLNSDSAKTLRVSVALTNIETPNPILAVTSSLLPVGLGISSIS KVVTGEHTNVGSATIELMISDAKTGQPIVAVIDRKAGSKDFSTMIDSTDDAKDAVDWWVERLGSTLRGEAL >Mature_230_residues TATRIFILTMTLLLTGCGVVQDYRNSQMFSSFEDFRPGPEGGSDLIWAQPGIKSLEDLNHILGQYDNVIVDQAWLVLDDK TRYDNLDEQDIIEVSRYLVSKIKDKASKRFNVIDQDTLNSDSAKTLRVSVALTNIETPNPILAVTSSLLPVGLGISSISK VVTGEHTNVGSATIELMISDAKTGQPIVAVIDRKAGSKDFSTMIDSTDDAKDAVDWWVERLGSTLRGEAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25325; Mature: 25194
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATRIFILTMTLLLTGCGVVQDYRNSQMFSSFEDFRPGPEGGSDLIWAQPGIKSLEDLN CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHH HILGQYDNVIVDQAWLVLDDKTRYDNLDEQDIIEVSRYLVSKIKDKASKRFNVIDQDTLN HHHHHHCCEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SDSAKTLRVSVALTNIETPNPILAVTSSLLPVGLGISSISKVVTGEHTNVGSATIELMIS CCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEEE DAKTGQPIVAVIDRKAGSKDFSTMIDSTDDAKDAVDWWVERLGSTLRGEAL CCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TATRIFILTMTLLLTGCGVVQDYRNSQMFSSFEDFRPGPEGGSDLIWAQPGIKSLEDLN CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHH HILGQYDNVIVDQAWLVLDDKTRYDNLDEQDIIEVSRYLVSKIKDKASKRFNVIDQDTLN HHHHHHCCEEEECEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SDSAKTLRVSVALTNIETPNPILAVTSSLLPVGLGISSISKVVTGEHTNVGSATIELMIS CCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEEE DAKTGQPIVAVIDRKAGSKDFSTMIDSTDDAKDAVDWWVERLGSTLRGEAL CCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA