| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is fecC [C]
Identifier: 157963196
GI number: 157963196
Start: 4129167
End: 4130222
Strand: Reverse
Name: fecC [C]
Synonym: Spea_3381
Alternate gene names: 157963196
Gene position: 4130222-4129167 (Counterclockwise)
Preceding gene: 157963197
Following gene: 157963195
Centisome position: 79.82
GC content: 50.47
Gene sequence:
>1056_bases ATGAGTAAGCCTTCAGCTCGCCAAGTCGGCGCAGTATTGAGTCAGCGGCGTCCTATCGAGTACCTAGTATTTTCCTTGTT GCTCTTTATAACTTTGCTTACCCCTTTTGCGGCGACAAGTTTTGGCGCTGCAACAGTTAGTGCCGTTGATGTTTTTAATG TGCTGGCTTATAAGCTGCTGAATCTTGGTGAGTCACTGGGGGTTAGAGAGCGGATTATTTGGGAGCTGCGTTTACCGCGA GTGTTACTGGCCTTTATCGCCGGAGCAGGGCTCTCGATTGCTGGTAGTGTGTTGCAAACAGTGACTCGAAATCCGCTAGC AGACCCTTATCTGTTTGGGATCTCATCCGGCGCCTCTTTCGGCGCTGTAGTGGCGTTAACCCTATTTAGCCAAAGTATGC TTTGGTTAAGCCTGCCCGTAGGAGCCTTTATTGGCGCTAGCTTGTCGGTGGTGATGGTGCTGAGCCTGTGCGGCCGCAAC TTAAGTACCCAGGTTGAACGTATGTTGCTCTCCGGCGTGGCTATCTCGTTTATGTTTGGCGCGATGGCAAGCCTGATGCT GTATTTCTCTAGCCCACAAGCTGCGGCCTCTGTGCTGTTTTGGACCTTAGGCAGTTTTGCCAAAGCCAGCTGGCAAGGCC TATGGTTGCCAGCCGGAAGCGTTATCTTATCTACCCTAATCATCTTACTTAATAAGCGCCAGATTGTGGCCATGCGTGCG GGCGATGAAACCGCCCATACCCTAGGGATTAATGTCGGCCACTTGCGTCTCAATATGTTGCTTCTGTGCTCGCTTATCAC CGCGATACTGGTCGCAAATTGTGGCGGTATCGGCTTTATCGGCTTAATGGTGCCCCATACGGTGCGTTTACTGTTTCCGG GACGCTACCCCCTGTTATTAACGGCGCTGGTGGGAGGGCTATTTATGGTTTGGGTCGATGTATTAGCCCGAACATTATTG AGTTATCAAGAATTGCCTGTGGGGATCATTACCTCGGTGATGGGCAGTATTTTCTTTCTATTTATTTTAGGCAGTCGCAG CGGTAAACGTATTTAG
Upstream 100 bases:
>100_bases CAACATGGCAACCCACTGATCAGTTACTTTTATGGCTATGATGCGAGCCTTGCGGATTCCACTCAACATTCGATAGAAAA TCCTATTGCAGGAGGGCTAG
Downstream 100 bases:
>100_bases CGAGCCACATTTATAACATCCTTATTGAGTGGTTGAGGGGAAACAATGATGTTTGATATTAAAGCTGTAAATACTGAATT TGATGATGAAATTCAGCAAA
Product: transport system permease
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSKPSARQVGAVLSQRRPIEYLVFSLLLFITLLTPFAATSFGAATVSAVDVFNVLAYKLLNLGESLGVRERIIWELRLPR VLLAFIAGAGLSIAGSVLQTVTRNPLADPYLFGISSGASFGAVVALTLFSQSMLWLSLPVGAFIGASLSVVMVLSLCGRN LSTQVERMLLSGVAISFMFGAMASLMLYFSSPQAAASVLFWTLGSFAKASWQGLWLPAGSVILSTLIILLNKRQIVAMRA GDETAHTLGINVGHLRLNMLLLCSLITAILVANCGGIGFIGLMVPHTVRLLFPGRYPLLLTALVGGLFMVWVDVLARTLL SYQELPVGIITSVMGSIFFLFILGSRSGKRI
Sequences:
>Translated_351_residues MSKPSARQVGAVLSQRRPIEYLVFSLLLFITLLTPFAATSFGAATVSAVDVFNVLAYKLLNLGESLGVRERIIWELRLPR VLLAFIAGAGLSIAGSVLQTVTRNPLADPYLFGISSGASFGAVVALTLFSQSMLWLSLPVGAFIGASLSVVMVLSLCGRN LSTQVERMLLSGVAISFMFGAMASLMLYFSSPQAAASVLFWTLGSFAKASWQGLWLPAGSVILSTLIILLNKRQIVAMRA GDETAHTLGINVGHLRLNMLLLCSLITAILVANCGGIGFIGLMVPHTVRLLFPGRYPLLLTALVGGLFMVWVDVLARTLL SYQELPVGIITSVMGSIFFLFILGSRSGKRI >Mature_350_residues SKPSARQVGAVLSQRRPIEYLVFSLLLFITLLTPFAATSFGAATVSAVDVFNVLAYKLLNLGESLGVRERIIWELRLPRV LLAFIAGAGLSIAGSVLQTVTRNPLADPYLFGISSGASFGAVVALTLFSQSMLWLSLPVGAFIGASLSVVMVLSLCGRNL STQVERMLLSGVAISFMFGAMASLMLYFSSPQAAASVLFWTLGSFAKASWQGLWLPAGSVILSTLIILLNKRQIVAMRAG DETAHTLGINVGHLRLNMLLLCSLITAILVANCGGIGFIGLMVPHTVRLLFPGRYPLLLTALVGGLFMVWVDVLARTLLS YQELPVGIITSVMGSIFFLFILGSRSGKRI
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790741, Length=303, Percent_Identity=33.003300330033, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1790740, Length=271, Percent_Identity=37.2693726937269, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1786347, Length=273, Percent_Identity=33.6996336996337, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1788004, Length=276, Percent_Identity=32.9710144927536, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI1786804, Length=310, Percent_Identity=31.2903225806452, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1786805, Length=280, Percent_Identity=31.0714285714286, Blast_Score=89, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 37559; Mature: 37427
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPSARQVGAVLSQRRPIEYLVFSLLLFITLLTPFAATSFGAATVSAVDVFNVLAYKLL CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH NLGESLGVRERIIWELRLPRVLLAFIAGAGLSIAGSVLQTVTRNPLADPYLFGISSGASF HCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCH GAVVALTLFSQSMLWLSLPVGAFIGASLSVVMVLSLCGRNLSTQVERMLLSGVAISFMFG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AMASLMLYFSSPQAAASVLFWTLGSFAKASWQGLWLPAGSVILSTLIILLNKRQIVAMRA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCEEEEEEC GDETAHTLGINVGHLRLNMLLLCSLITAILVANCGGIGFIGLMVPHTVRLLFPGRYPLLL CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH TALVGGLFMVWVDVLARTLLSYQELPVGIITSVMGSIFFLFILGSRSGKRI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SKPSARQVGAVLSQRRPIEYLVFSLLLFITLLTPFAATSFGAATVSAVDVFNVLAYKLL CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH NLGESLGVRERIIWELRLPRVLLAFIAGAGLSIAGSVLQTVTRNPLADPYLFGISSGASF HCCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCH GAVVALTLFSQSMLWLSLPVGAFIGASLSVVMVLSLCGRNLSTQVERMLLSGVAISFMFG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AMASLMLYFSSPQAAASVLFWTLGSFAKASWQGLWLPAGSVILSTLIILLNKRQIVAMRA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCEEEEEEC GDETAHTLGINVGHLRLNMLLLCSLITAILVANCGGIGFIGLMVPHTVRLLFPGRYPLLL CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHH TALVGGLFMVWVDVLARTLLSYQELPVGIITSVMGSIFFLFILGSRSGKRI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]