| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963164
Identifier: 157963164
GI number: 157963164
Start: 4093171
End: 4093908
Strand: Reverse
Name: 157963164
Synonym: Spea_3348
Alternate gene names: NA
Gene position: 4093908-4093171 (Counterclockwise)
Preceding gene: 157963165
Following gene: 157963163
Centisome position: 79.12
GC content: 45.53
Gene sequence:
>738_bases ATGAAGTTTACACATGCGATTATGCTTGGCAGTTTAGCAATGGCGAGCATGGGCTCAGCCGTTGCGGCAGACGACAATGA GCTTTTCGGTGGCCAGATTAGTGGTAACGTTAAGTTTGCTACAGACTATGTTTTTCGTGGTGAGTCAGAAACCATGGATG GTGATGTACCTGTTGTGCAAGGTACTCTAGGCTGGGGCAATGACGATGGCTGGTACACAGGTGTATTCGCTTCAAACATC AAGTTTGCTGACCCAAACCTTGAAATCGTAACCGCTCCTTATATCGGTAAGGCCGGCGCGTTTGGTGACAGTGGTTTTAC CTATGATGTGATGGTGTTTTCATATCTTTATCCTGGCGCTTCTTACTCAAACTACACAGAGCTTTGGGTTCGCGTGGCTA AGCAGTTTGGTCAGGCTAATGTGCAGCTTGAAGTGACGCCAACATTAGATGATTGGTTTGGTGTCGATGGCTGGCAAGGC GTTAACTATGCAATTCACCCAAGCTATGATTTTAACAATGGCGTGAAGTTATCAGGTTCATTTGGTTATCAAGATCTCGA TGGTGAAGGCGCAGAAGGCTGGACTCACTGGAATTTAGGTGTTGAAGCTAATTATGTTGGCCTAACATTCGATCTGCGTT ATCACGGTAGTTCAGTGGATGACACTCACTTAGTTTATGGTACACAAACTGAAATCTTCGATGATCGCGTTGTCTTCGGT GTTAGCAAGAGCTTCTAA
Upstream 100 bases:
>100_bases TTAGTTCATATCTACTCTCAAGGTCATTAATAATTAGCGGGTAAGATCTGCTATAGACTTAGATTAAAACCTATAAATTG AAACAAACGGGATGATGATT
Downstream 100 bases:
>100_bases GTAATTGCTGTTTATATAAATTAATATCTCGATACTTAATGGCCAACTCTTATGAGTTGGCTTTTTTATATGGGGTCGTT TTTGCAATTTGTTGCCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKFTHAIMLGSLAMASMGSAVAADDNELFGGQISGNVKFATDYVFRGESETMDGDVPVVQGTLGWGNDDGWYTGVFASNI KFADPNLEIVTAPYIGKAGAFGDSGFTYDVMVFSYLYPGASYSNYTELWVRVAKQFGQANVQLEVTPTLDDWFGVDGWQG VNYAIHPSYDFNNGVKLSGSFGYQDLDGEGAEGWTHWNLGVEANYVGLTFDLRYHGSSVDDTHLVYGTQTEIFDDRVVFG VSKSF
Sequences:
>Translated_245_residues MKFTHAIMLGSLAMASMGSAVAADDNELFGGQISGNVKFATDYVFRGESETMDGDVPVVQGTLGWGNDDGWYTGVFASNI KFADPNLEIVTAPYIGKAGAFGDSGFTYDVMVFSYLYPGASYSNYTELWVRVAKQFGQANVQLEVTPTLDDWFGVDGWQG VNYAIHPSYDFNNGVKLSGSFGYQDLDGEGAEGWTHWNLGVEANYVGLTFDLRYHGSSVDDTHLVYGTQTEIFDDRVVFG VSKSF >Mature_245_residues MKFTHAIMLGSLAMASMGSAVAADDNELFGGQISGNVKFATDYVFRGESETMDGDVPVVQGTLGWGNDDGWYTGVFASNI KFADPNLEIVTAPYIGKAGAFGDSGFTYDVMVFSYLYPGASYSNYTELWVRVAKQFGQANVQLEVTPTLDDWFGVDGWQG VNYAIHPSYDFNNGVKLSGSFGYQDLDGEGAEGWTHWNLGVEANYVGLTFDLRYHGSSVDDTHLVYGTQTEIFDDRVVFG VSKSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26759; Mature: 26759
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTHAIMLGSLAMASMGSAVAADDNELFGGQISGNVKFATDYVFRGESETMDGDVPVVQ CCCHHHHHHHHHHHHHCCCEEECCCCCEECCEECCCEEEEEEEEEECCCCCCCCCCCEEE GTLGWGNDDGWYTGVFASNIKFADPNLEIVTAPYIGKAGAFGDSGFTYDVMVFSYLYPGA EECCCCCCCCEEEEEEECCEEEECCCEEEEECCCCCCCCCCCCCCCEEHEEEEEHHCCCC SYSNYTELWVRVAKQFGQANVQLEVTPTLDDWFGVDGWQGVNYAIHPSYDFNNGVKLSGS CCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCCCCEEECCCCCCCCCEEEECC FGYQDLDGEGAEGWTHWNLGVEANYVGLTFDLRYHGSSVDDTHLVYGTQTEIFDDRVVFG CCCCCCCCCCCCCEEEEECCEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEE VSKSF EECCC >Mature Secondary Structure MKFTHAIMLGSLAMASMGSAVAADDNELFGGQISGNVKFATDYVFRGESETMDGDVPVVQ CCCHHHHHHHHHHHHHCCCEEECCCCCEECCEECCCEEEEEEEEEECCCCCCCCCCCEEE GTLGWGNDDGWYTGVFASNIKFADPNLEIVTAPYIGKAGAFGDSGFTYDVMVFSYLYPGA EECCCCCCCCEEEEEEECCEEEECCCEEEEECCCCCCCCCCCCCCCEEHEEEEEHHCCCC SYSNYTELWVRVAKQFGQANVQLEVTPTLDDWFGVDGWQGVNYAIHPSYDFNNGVKLSGS CCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHCCCCCCCCCCEEECCCCCCCCCEEEECC FGYQDLDGEGAEGWTHWNLGVEANYVGLTFDLRYHGSSVDDTHLVYGTQTEIFDDRVVFG CCCCCCCCCCCCCEEEEECCEEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEE VSKSF EECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA