Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963165

Identifier: 157963165

GI number: 157963165

Start: 4094050

End: 4094874

Strand: Reverse

Name: 157963165

Synonym: Spea_3349

Alternate gene names: NA

Gene position: 4094874-4094050 (Counterclockwise)

Preceding gene: 157963166

Following gene: 157963164

Centisome position: 79.13

GC content: 45.7

Gene sequence:

>825_bases
GTGCTTGCGAACGTTTCTGGCCTGCAGTCAAAGCTTAAGCTGATTGACAATAGTAAGGTTTTTCAAGGTTTTGTTATTTT
TGTCATTGTGGTGTCGGCGTTATCCATTGGCGCGCATACCTATCATCTCCCAGCGTGGATGGAGCAAAGCTTAGTCGTAC
TGGATATCGGTATTACGGTGTTTTTCGCCATTGAACTTGTGATCCGTTTTCTTGCCAGTGACGGCCCGAAGCGGTTTTTC
AGTAACGGTTGGAATGTTTTCGACACCATGATTGTTATTGGTAGCCTTATTCCTGCTGGTGGCTCGGCTATTTTGCTCGC
CCGTTTATTGCGAATTTTTAGGGTACTGCGTTTGGTCTCTATGATCCCAGAACTAAGAATGCTAGTGAATGCGCTATTAA
AGGCTATCCCCCGAATGGGCTATATCGCTTTACTGATGTTTGTGATTTTCTATATATACGGCGCTGTAGGCAGTATGTTT
TTTGCCAATGTGAATGACTTCCTCTGGGGAGATGTCTCAGTTGCCATGCTGACCCTGTTCAGGATCTCGACCTTCGAGTC
TTGGACATCGATCATGTATGAGACCATGGCGGTATACCCTCTGAGCTGGATCTATTATCTAAGCTTTATCTTTTTAACTG
CCTTCGTGTTTTTAAATATGATGGTAGGAGCCGTGCTAGATGTGATGACCCAAGAGACGGCCGCCATGCGTGGTGAGCTG
GCTTCTGATGAAGCAACTGATAAACCTGCTAGCGCAGCAGATGTAGCAGAGATTAAAGTGCAAATTGAGGAGCTAAAGGC
ACTGCTGCTGAGAAAGGCGAGTTAA

Upstream 100 bases:

>100_bases
GACTTCTTATACTGATTGGTATTACACTTCGCGCCCCGATGCACTCACACCATTGAGTGCATGCCTATTTAATTCTCTTT
TTACTCTAAAGGAGCAAGGT

Downstream 100 bases:

>100_bases
GTCGTACTGTGCTATTCATATTTGTTCATAATGTTAGTTTGTTAGTTCATATCTACTCTCAAGGTCATTAATAATTAGCG
GGTAAGATCTGCTATAGACT

Product: Ion transport protein

Products: NA

Alternate protein names: Cation Channel Family Protein; Voltage-Gated Sodium Channel Subunit; Cation Transporter Component; Transporter Cation Channel Family; Cation Transporter; K+ Transporter Kef-Type; Ion Channel Selectivity Component; Sodium Channel Na(V)BP; Ion Transporter; Cold Shock Protein

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLANVSGLQSKLKLIDNSKVFQGFVIFVIVVSALSIGAHTYHLPAWMEQSLVVLDIGITVFFAIELVIRFLASDGPKRFF
SNGWNVFDTMIVIGSLIPAGGSAILLARLLRIFRVLRLVSMIPELRMLVNALLKAIPRMGYIALLMFVIFYIYGAVGSMF
FANVNDFLWGDVSVAMLTLFRISTFESWTSIMYETMAVYPLSWIYYLSFIFLTAFVFLNMMVGAVLDVMTQETAAMRGEL
ASDEATDKPASAADVAEIKVQIEELKALLLRKAS

Sequences:

>Translated_274_residues
MLANVSGLQSKLKLIDNSKVFQGFVIFVIVVSALSIGAHTYHLPAWMEQSLVVLDIGITVFFAIELVIRFLASDGPKRFF
SNGWNVFDTMIVIGSLIPAGGSAILLARLLRIFRVLRLVSMIPELRMLVNALLKAIPRMGYIALLMFVIFYIYGAVGSMF
FANVNDFLWGDVSVAMLTLFRISTFESWTSIMYETMAVYPLSWIYYLSFIFLTAFVFLNMMVGAVLDVMTQETAAMRGEL
ASDEATDKPASAADVAEIKVQIEELKALLLRKAS
>Mature_274_residues
MLANVSGLQSKLKLIDNSKVFQGFVIFVIVVSALSIGAHTYHLPAWMEQSLVVLDIGITVFFAIELVIRFLASDGPKRFF
SNGWNVFDTMIVIGSLIPAGGSAILLARLLRIFRVLRLVSMIPELRMLVNALLKAIPRMGYIALLMFVIFYIYGAVGSMF
FANVNDFLWGDVSVAMLTLFRISTFESWTSIMYETMAVYPLSWIYYLSFIFLTAFVFLNMMVGAVLDVMTQETAAMRGEL
ASDEATDKPASAADVAEIKVQIEELKALLLRKAS

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI192807298, Length=260, Percent_Identity=26.9230769230769, Blast_Score=109, Evalue=2e-24,
Organism=Homo sapiens, GI53832011, Length=286, Percent_Identity=26.5734265734266, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI53832009, Length=286, Percent_Identity=26.5734265734266, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI53832007, Length=261, Percent_Identity=27.2030651340996, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI264681420, Length=261, Percent_Identity=25.2873563218391, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI4502527, Length=275, Percent_Identity=25.4545454545455, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI192807300, Length=275, Percent_Identity=25.4545454545455, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI21361077, Length=265, Percent_Identity=27.9245283018868, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38505270, Length=252, Percent_Identity=26.1904761904762, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38505292, Length=252, Percent_Identity=26.1904761904762, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38505290, Length=252, Percent_Identity=26.1904761904762, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38505288, Length=252, Percent_Identity=26.1904761904762, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38505278, Length=252, Percent_Identity=26.1904761904762, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38505274, Length=252, Percent_Identity=26.1904761904762, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI51093859, Length=265, Percent_Identity=27.9245283018868, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI38505280, Length=252, Percent_Identity=26.1904761904762, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI264681418, Length=272, Percent_Identity=26.1029411764706, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI193794828, Length=272, Percent_Identity=26.1029411764706, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI38505268, Length=252, Percent_Identity=26.1904761904762, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI4502523, Length=260, Percent_Identity=26.9230769230769, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI38505294, Length=246, Percent_Identity=26.0162601626016, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI38505286, Length=246, Percent_Identity=26.0162601626016, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI38505284, Length=246, Percent_Identity=26.0162601626016, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI38505282, Length=246, Percent_Identity=26.0162601626016, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI38505276, Length=246, Percent_Identity=26.0162601626016, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI38505272, Length=246, Percent_Identity=26.0162601626016, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI20070163, Length=246, Percent_Identity=26.0162601626016, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI193788730, Length=272, Percent_Identity=24.6323529411765, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI193788530, Length=272, Percent_Identity=24.6323529411765, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI193788528, Length=272, Percent_Identity=24.6323529411765, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI187828892, Length=268, Percent_Identity=25, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI187828880, Length=268, Percent_Identity=25, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI115583667, Length=243, Percent_Identity=27.9835390946502, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI53832005, Length=253, Percent_Identity=25.296442687747, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI148536846, Length=270, Percent_Identity=24.8148148148148, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI291463273, Length=270, Percent_Identity=24.8148148148148, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI148536844, Length=270, Percent_Identity=24.8148148148148, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI193794832, Length=257, Percent_Identity=25.6809338521401, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI193788548, Length=259, Percent_Identity=25.4826254826255, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI193788532, Length=259, Percent_Identity=25.4826254826255, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI193788534, Length=259, Percent_Identity=25.4826254826255, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI264681416, Length=270, Percent_Identity=26.2962962962963, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI193788544, Length=270, Percent_Identity=26.2962962962963, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI193788540, Length=270, Percent_Identity=26.2962962962963, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI193788538, Length=270, Percent_Identity=26.2962962962963, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI120433602, Length=270, Percent_Identity=24.8148148148148, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI193788526, Length=270, Percent_Identity=24.8148148148148, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI193788536, Length=270, Percent_Identity=24.8148148148148, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI193788542, Length=270, Percent_Identity=24.8148148148148, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI110349767, Length=269, Percent_Identity=24.1635687732342, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI193794830, Length=287, Percent_Identity=24.7386759581882, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI193788724, Length=298, Percent_Identity=23.8255033557047, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI193788732, Length=298, Percent_Identity=23.8255033557047, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI193788720, Length=298, Percent_Identity=23.8255033557047, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI110835710, Length=279, Percent_Identity=25.089605734767, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI193788728, Length=236, Percent_Identity=25.4237288135593, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI93587342, Length=191, Percent_Identity=27.7486910994764, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI237512982, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI237512980, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI150417969, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI126362947, Length=275, Percent_Identity=25.0909090909091, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI126362955, Length=275, Percent_Identity=25.0909090909091, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI150417967, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI30089970, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI37622907, Length=189, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI126362949, Length=275, Percent_Identity=25.0909090909091, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI4506813, Length=191, Percent_Identity=26.7015706806283, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI310127842, Length=301, Percent_Identity=23.2558139534884, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI111378393, Length=209, Percent_Identity=27.7511961722488, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI29789451, Length=164, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI25145845, Length=254, Percent_Identity=28.740157480315, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71984932, Length=254, Percent_Identity=28.740157480315, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI193210847, Length=251, Percent_Identity=26.6932270916335, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI25146680, Length=251, Percent_Identity=26.6932270916335, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI25146674, Length=249, Percent_Identity=27.710843373494, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI71995563, Length=249, Percent_Identity=27.710843373494, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI25146601, Length=244, Percent_Identity=22.9508196721311, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71986080, Length=206, Percent_Identity=30.5825242718447, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71986075, Length=206, Percent_Identity=30.5825242718447, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71986085, Length=275, Percent_Identity=22.1818181818182, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71986069, Length=271, Percent_Identity=24.3542435424354, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI19584591, Length=280, Percent_Identity=26.0714285714286, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24584549, Length=280, Percent_Identity=26.0714285714286, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24584551, Length=280, Percent_Identity=26.0714285714286, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24584554, Length=280, Percent_Identity=26.0714285714286, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI62473623, Length=263, Percent_Identity=26.615969581749, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI62473635, Length=263, Percent_Identity=26.615969581749, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI45554974, Length=262, Percent_Identity=26.7175572519084, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24641459, Length=262, Percent_Identity=26.7175572519084, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI45554951, Length=262, Percent_Identity=26.7175572519084, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI45554962, Length=262, Percent_Identity=26.7175572519084, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI62473598, Length=264, Percent_Identity=26.1363636363636, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI62473612, Length=264, Percent_Identity=26.1363636363636, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI45554921, Length=265, Percent_Identity=26.0377358490566, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI45554935, Length=265, Percent_Identity=26.0377358490566, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24642537, Length=281, Percent_Identity=28.1138790035587, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI116007172, Length=281, Percent_Identity=28.1138790035587, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI161077583, Length=237, Percent_Identity=24.4725738396624, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI161077483, Length=254, Percent_Identity=24.0157480314961, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI116007170, Length=281, Percent_Identity=27.7580071174377, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI221329977, Length=281, Percent_Identity=27.7580071174377, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI161077585, Length=254, Percent_Identity=22.8346456692913, Blast_Score=81, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30517; Mature: 30517

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure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CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA